CU088808 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
TTTTTCCTAGGTTGCACTACTTCTAAAAGCTCGATGTTTCAATTCAAAAGTAGCTCCAGGTGGGATTTTCATTCATTCCTTTTTGACCATATCCAGCCTCTGGGGGAACAATCACCCTTCGCTTTCCCCCAACTTTTCATCCCTTCAGTTATGGGGTACATTGCTGGTGGGGGTTTAGGTGCAGCCTGTGCTGAAAACAGACCATTTGGATTGTCCACAAAATCACGTTTCCGCTCCTTCCCGGGCGGGGCTCCTACTTTGAACTCATAAGGCTGGGCGATAACACGATTTCCAGCCAAGAGCTTAGATTCTCGACTCGACACAGCTGTAATCCCTCTATAGAGGCAATCAAAGTGCACCTGAACTGTGGAACCCTTCTCTGCCACACGGG
BLAST of CU088808 vs. Swiss-Prot
Match: FKB18_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana GN=FKBP18 PE=1 SV=2) HSP 1 Score: 152.9 bits (385), Expect = 2.4e-36 Identity = 74/88 (84.09%), Postives = 77/88 (87.50%), Query Frame = -3
HSP 2 Score: 38.5 bits (88), Expect = 6.6e-02 Identity = 17/22 (77.27%), Postives = 16/22 (72.73%), Query Frame = -1
BLAST of CU088808 vs. TrEMBL
Match: A0A0A0L0S6_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_4G664330 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40 Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = -3
BLAST of CU088808 vs. TrEMBL
Match: A0A0A0L0S6_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_4G664330 PE=4 SV=1) HSP 1 Score: 38.5 bits (88), Expect = 7.3e+00 Identity = 17/22 (77.27%), Postives = 18/22 (81.82%), Query Frame = -1
HSP 2 Score: 169.5 bits (428), Expect = 2.7e-39 Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = -3
BLAST of CU088808 vs. TrEMBL
Match: A0A061FE50_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_034431 PE=4 SV=1) HSP 1 Score: 37.0 bits (84), Expect = 2.1e+01 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = -1
HSP 2 Score: 169.5 bits (428), Expect = 2.7e-39 Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = -3
BLAST of CU088808 vs. TrEMBL
Match: A0A061FF46_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_034431 PE=4 SV=1) HSP 1 Score: 37.0 bits (84), Expect = 2.1e+01 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = -1
HSP 2 Score: 167.9 bits (424), Expect = 7.9e-39 Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = -3
BLAST of CU088808 vs. TrEMBL
Match: B9R8R8_RICCO (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_1601880 PE=4 SV=1) HSP 1 Score: 37.0 bits (84), Expect = 2.1e+01 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = -1
HSP 2 Score: 167.5 bits (423), Expect = 1.0e-38 Identity = 79/87 (90.80%), Postives = 83/87 (95.40%), Query Frame = -3
BLAST of CU088808 vs. NCBI nr
Match: gi|449455631|ref|XP_004145556.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 5.5e-41 Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = -3
BLAST of CU088808 vs. NCBI nr
Match: gi|659105087|ref|XP_008453010.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic [Cucumis melo]) HSP 1 Score: 175.3 bits (443), Expect = 7.1e-41 Identity = 85/88 (96.59%), Postives = 85/88 (96.59%), Query Frame = -3
BLAST of CU088808 vs. NCBI nr
Match: gi|590595637|ref|XP_007018112.1| (FKBP-like peptidyl-prolyl cis-trans isomerase family protein isoform 2 [Theobroma cacao]) HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39 Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = -3
BLAST of CU088808 vs. NCBI nr
Match: gi|590595634|ref|XP_007018111.1| (FKBP-like peptidyl-prolyl cis-trans isomerase family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39 Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = -3
BLAST of CU088808 vs. NCBI nr
Match: gi|743895813|ref|XP_011041180.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic isoform X2 [Populus euphratica]) HSP 1 Score: 170.6 bits (431), Expect = 1.8e-39 Identity = 80/88 (90.91%), Postives = 84/88 (95.45%), Query Frame = -3
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
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