MELO3C009817 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C009817
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Tetratricopeptide repeat-containing family protein
Location	chr4 : 27787387 .. 27787907 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCTCACTTTCTCCCTTGCTTTCTCACTGTCTCCCTTGCTCTCTCACTGTCTCCCTCGTCTTCAACAGGTAACCTCTCTCATCTTCCTCTTCTCTATACTATTCTTCTTTCAATAACAACAAGGATAACCGAGAAAGCAGTTTGTGTTTCCTTTTACGGGGAGCCAAATTGGGGAGTCCAGGAAATCTTGCTGAAGGGAATTTGGGGTCTGGGAATTTACAATTTGGTAGTGAAACTTGGGTGGTTAAAAGGGCAATGGCGAGCTCCGATTCAGAGGAGGTCAAAAGGGCTGCGAATGAATTGTATAGAAGAGGGAGTTTTGTAGAAGCCTTGTCGTTGTATGATCGTGCAATTTCTTTGTTCCCGGAAAATGCTGCTTATCGGAGCAATAGGGCGGCGGCGTTGACTGCACTTGGTCGGCTGGGTGAGGCAGTGAGAGAGTGTGAGGAGGCTGTGAGGCTCGATCTTGGCTATGGCAGGGCTCACCAGCGGCTTGCTGCTCTTTATCTTCGGTAA

mRNA sequence

ATGCTCTCTCACTTTCTCCCTTGCTTTCTCACTGTCTCCCTTGCTCTCTCACTGTCTCCCTCGTCTTCAACAGCCAAATTGGGGAGTCCAGGAAATCTTGCTGAAGGGAATTTGGGGTCTGGGAATTTACAATTTGGTAGTGAAACTTGGGTGGTTAAAAGGGCAATGGCGAGCTCCGATTCAGAGGAGGTCAAAAGGGCTGCGAATGAATTGTATAGAAGAGGGAGTTTTGTAGAAGCCTTGTCGTTGTATGATCGTGCAATTTCTTTGTTCCCGGAAAATGCTGCTTATCGGAGCAATAGGGCGGCGGCGTTGACTGCACTTGGTCGGCTGGGTGAGGCAGTGAGAGAGTGTGAGGAGGCTGTGAGGCTCGATCTTGGCTATGGCAGGGCTCACCAGCGGCTTGCTGCTCTTTATCTTCGGTAA

Coding sequence (CDS)

ATGCTCTCTCACTTTCTCCCTTGCTTTCTCACTGTCTCCCTTGCTCTCTCACTGTCTCCCTCGTCTTCAACAGCCAAATTGGGGAGTCCAGGAAATCTTGCTGAAGGGAATTTGGGGTCTGGGAATTTACAATTTGGTAGTGAAACTTGGGTGGTTAAAAGGGCAATGGCGAGCTCCGATTCAGAGGAGGTCAAAAGGGCTGCGAATGAATTGTATAGAAGAGGGAGTTTTGTAGAAGCCTTGTCGTTGTATGATCGTGCAATTTCTTTGTTCCCGGAAAATGCTGCTTATCGGAGCAATAGGGCGGCGGCGTTGACTGCACTTGGTCGGCTGGGTGAGGCAGTGAGAGAGTGTGAGGAGGCTGTGAGGCTCGATCTTGGCTATGGCAGGGCTCACCAGCGGCTTGCTGCTCTTTATCTTCGGTAA

Protein sequence

MLSHFLPCFLTVSLALSLSPSSSTAKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR*

Homology

[Close]

BLAST of MELO3C009817 vs. Swiss-Prot
Match: TTL1_ARATH (TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana GN=TTL1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.2e-30
Identity = 70/122 (57.38%), Postives = 84/122 (68.85%), Query Frame = 1


Query: 20  PSSSTAKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVE 79
           P+++     SP N+   +  S  +  G ET + K+A+  SDSEEVKR  NE+YR+G F E
Sbjct: 187 PTNTGGGSNSPVNVGSSSRSSSTVATG-ETPIWKKAILGSDSEEVKRVGNEMYRKGLFNE 246

Query: 80  ALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALY 139
           AL LYDRAI+L P NAAYRSNRAAAL  L R+GEAV+ECE+AVR D  YGRAH RLA L 
Sbjct: 247 ALKLYDRAIALSPTNAAYRSNRAAALIGLSRIGEAVKECEDAVRSDPNYGRAHHRLALLL 306

Query: 140 LR 142
           +R
Sbjct: 307 IR 307

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BLAST of MELO3C009817 vs. Swiss-Prot
Match: TTL3_ARATH (Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis thaliana GN=TTL3 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-29
Identity = 74/132 (56.06%), Postives = 86/132 (65.15%), Query Frame = 1


Query: 10  LTVSLALSLSPSSSTAKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAAN 69
           L   +A   S  + T   G+ GN   GN+       G+    V+ A    + EE+KR  N
Sbjct: 170 LKTGMASRTSSRTETLCTGT-GNYGHGNVVRSGGGGGTSGKAVRVAENGENPEELKRMGN 229

Query: 70  ELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYG 129
           ++YRRGSF EALSLYDRAI + P NAAYRSNRAAALTAL RLGEAV+EC EAVR+D  Y 
Sbjct: 230 DMYRRGSFSEALSLYDRAILISPGNAAYRSNRAAALTALRRLGEAVKECLEAVRIDPSYS 289

Query: 130 RAHQRLAALYLR 142
           RAHQRLA+LYLR
Sbjct: 290 RAHQRLASLYLR 300

HSP 2 Score: 39.3 bits (90), Expect = 4.2e-02
Identity = 24/71 (33.80%), Postives = 31/71 (43.66%), Query Frame = 1


Query: 69  NELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGY 128
           NEL+  G F EA   Y   +     N+    NRAA    LG   ++V +C  A++    Y
Sbjct: 466 NELFSSGRFSEACVAYGDGLKQDDSNSVLYCNRAACWYKLGLWEKSVEDCNHALKSQPSY 525

Query: 129 GRAHQRLAALY 140
            +A  R AA Y
Sbjct: 526 IKALLRRAASY 536

[Close]

BLAST of MELO3C009817 vs. Swiss-Prot
Match: TTL4_ARATH (TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana GN=TTL4 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-29
Identity = 76/136 (55.88%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 17  SLSPSSSTAKLGS-------PGNLAEG--NLGSGNL--QFGSETWVVKRAMASSDSEEVK 76
           ++ PS    K G        P  L  G  N G GN+    G  +   K A   SDSEEVK
Sbjct: 156 NICPSGRILKTGMATRASVRPETLCTGTANYGHGNIIRTGGKVSHATKAAAEMSDSEEVK 215

Query: 77  RAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLD 136
           +A N +YR+G++ EAL+LYDRAISL PEN AYRSNRAAAL A GRL EAV+EC EAVR D
Sbjct: 216 KAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCD 275

Query: 137 LGYGRAHQRLAALYLR 142
             Y RAHQRLA+LYLR
Sbjct: 276 PSYARAHQRLASLYLR 291

HSP 2 Score: 43.1 bits (100), Expect = 2.9e-03
Identity = 25/77 (32.47%), Postives = 36/77 (46.75%), Query Frame = 1


Query: 63  EVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAV 122
           + +   NEL+  G + EA   Y   + L   N+    NRAA    LG   ++V +C +A+
Sbjct: 451 KARTRGNELFSSGRYSEASVAYGDGLKLDAFNSVLYCNRAACWFKLGMWEKSVDDCNQAL 510

Query: 123 RLDLGYGRAHQRLAALY 140
           R+   Y +A  R AA Y
Sbjct: 511 RIQPSYTKALLRRAASY 527

[Close]

BLAST of MELO3C009817 vs. Swiss-Prot
Match: TTL2_ARATH (TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis thaliana GN=TTL2 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 8.7e-24
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1


Query: 53  KRAMASSDSEEVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLG 112
           K A+  S+ EEVKR  NE++R+G F EAL LYDRAI L P NA Y SNRAAAL++LG++G
Sbjct: 250 KIAIYGSNPEEVKRFGNEMFRKGCFAEALKLYDRAIELSPSNATYHSNRAAALSSLGQIG 309

Query: 113 EAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           EAV ECE A++LD  + RAH RLA+L LR
Sbjct: 310 EAVNECEIAIKLDPNFARAHHRLASLLLR 338

[Close]

BLAST of MELO3C009817 vs. Swiss-Prot
Match: SGTA_RAT (Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus norvegicus GN=Sgta PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.5e-10
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 1


Query: 58  SSDSEEVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRE 117
           S+++E +K   NE  +  +F  A+ LY +AI L P NA Y  NRAAA + LG    AV++
Sbjct: 88  SAEAERLKTEGNEQMKLENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYVGAVQD 147

Query: 118 CEEAVRLDLGYGRAHQRL 136
           CE A+ +D GY +A+ R+
Sbjct: 148 CERAIGIDPGYSKAYGRM 165

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BLAST of MELO3C009817 vs. TrEMBL
Match: A0A0A0K756_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051360 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 3.3e-54
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 26  KLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLYD 85
           KLGSPGNLAEGN GSGNLQFGSET VVKRAMASSD EEVKRAANELYRRGSFVEALSLYD
Sbjct: 219 KLGSPGNLAEGNFGSGNLQFGSETLVVKRAMASSDPEEVKRAANELYRRGSFVEALSLYD 278

Query: 86  RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR
Sbjct: 279 RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 334

[Close]

BLAST of MELO3C009817 vs. TrEMBL
Match: A5AUR7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003392 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.3e-41
Identity = 90/117 (76.92%), Postives = 103/117 (88.03%), Query Frame = 1


Query: 25  AKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLY 84
           AKL SP ++A+ N+ +GN+QF  E+ +VKRAM SSD EEVK+A NELYRRGSF EALSLY
Sbjct: 214 AKLSSPRSIADVNM-TGNIQFAGESVMVKRAMGSSDPEEVKKAGNELYRRGSFTEALSLY 273

Query: 85  DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           DRAISL P+NAAYRSNRAAALTALG+L EAV+ECEEAVRLD GYGRAHQRLA+LYLR
Sbjct: 274 DRAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLR 329

[Close]

BLAST of MELO3C009817 vs. TrEMBL
Match: F6H4Z5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02240 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.3e-41
Identity = 90/117 (76.92%), Postives = 103/117 (88.03%), Query Frame = 1


Query: 25  AKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLY 84
           AKL SP ++A+ N+ +GN+QF  E+ +VKRAM SSD EEVK+A NELYRRGSF EALSLY
Sbjct: 204 AKLSSPRSIADVNM-TGNIQFAGESVMVKRAMGSSDPEEVKKAGNELYRRGSFTEALSLY 263

Query: 85  DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           DRAISL P+NAAYRSNRAAALTALG+L EAV+ECEEAVRLD GYGRAHQRLA+LYLR
Sbjct: 264 DRAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLR 319

[Close]

BLAST of MELO3C009817 vs. TrEMBL
Match: M5WNW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021003mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.4e-35
Identity = 84/116 (72.41%), Postives = 94/116 (81.03%), Query Frame = 1


Query: 26  KLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLYD 85
           KL S  N + G+  + N+Q G E+ + KRAM +SD EEVK+A NELYRRG F EAL+LYD
Sbjct: 202 KLDSNVNTSGGS--NANVQLGGESVMGKRAMGNSDPEEVKKAGNELYRRGHFGEALALYD 261

Query: 86  RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           RAISL PENAAYRSNRAAALT LGRL EAVRECEEAVRLD GYGRAHQRL +LYLR
Sbjct: 262 RAISLSPENAAYRSNRAAALTVLGRLPEAVRECEEAVRLDPGYGRAHQRLGSLYLR 315

[Close]

BLAST of MELO3C009817 vs. TrEMBL
Match: M5WNW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021003mg PE=4 SV=1)

HSP 1 Score: 43.5 bits (101), Expect = 2.5e-01
Identity = 25/82 (30.49%), Postives = 41/82 (50.00%), Query Frame = 1


Query: 61  SEEVKRAAN------ELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEA 120
           S +VK+ AN      +L+  G F EA S Y   +     N+    NRA   + LG+  ++
Sbjct: 467 SNKVKKVANARSQGNDLFSSGRFAEACSAYGEGLKYDSSNSVLYCNRAVCRSKLGQWEQS 526

Query: 121 VRECEEAVRLDLGYGRAHQRLA 137
           V +C +A+++   Y +A  R A
Sbjct: 527 VEDCNQALKIQPNYIKALLRRA 548

HSP 2 Score: 148.7 bits (374), Expect = 5.5e-33
Identity = 84/128 (65.62%), Postives = 96/128 (75.00%), Query Frame = 1


Query: 19  SPSSSTAKLG-SPGNLAEGNLGSGNLQF----GSETWVVKRAMASSDSEEVKRAANELYR 78
           S ++ T KLG   GN   G++  G  +F    G    VVK+AM S D EEVK A NELY+
Sbjct: 186 SSATRTEKLGMGTGNYGHGSIIKGGGRFVESNGEIGIVVKKAMMSHDVEEVKNAGNELYK 245

Query: 79  RGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQ 138
           RG+F EALSLYDRAI++ PENAA RSNRAAALT LGRLGEAVRECEEAVRL+ GY RAHQ
Sbjct: 246 RGNFTEALSLYDRAITISPENAACRSNRAAALTMLGRLGEAVRECEEAVRLNPGYERAHQ 305

Query: 139 RLAALYLR 142
           RLA+LYLR
Sbjct: 306 RLASLYLR 313

[Close]

BLAST of MELO3C009817 vs. TAIR10
Match: AT1G53300.1 (AT1G53300.1 tetratricopetide-repeat thioredoxin-like 1)

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-31
Identity = 70/122 (57.38%), Postives = 84/122 (68.85%), Query Frame = 1


Query: 20  PSSSTAKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVE 79
           P+++     SP N+   +  S  +  G ET + K+A+  SDSEEVKR  NE+YR+G F E
Sbjct: 187 PTNTGGGSNSPVNVGSSSRSSSTVATG-ETPIWKKAILGSDSEEVKRVGNEMYRKGLFNE 246

Query: 80  ALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALY 139
           AL LYDRAI+L P NAAYRSNRAAAL  L R+GEAV+ECE+AVR D  YGRAH RLA L 
Sbjct: 247 ALKLYDRAIALSPTNAAYRSNRAAALIGLSRIGEAVKECEDAVRSDPNYGRAHHRLALLL 306

Query: 140 LR 142
           +R
Sbjct: 307 IR 307

[Close]

BLAST of MELO3C009817 vs. TAIR10
Match: AT2G42580.1 (AT2G42580.1 tetratricopetide-repeat thioredoxin-like 3)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 74/132 (56.06%), Postives = 86/132 (65.15%), Query Frame = 1


Query: 10  LTVSLALSLSPSSSTAKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAAN 69
           L   +A   S  + T   G+ GN   GN+       G+    V+ A    + EE+KR  N
Sbjct: 170 LKTGMASRTSSRTETLCTGT-GNYGHGNVVRSGGGGGTSGKAVRVAENGENPEELKRMGN 229

Query: 70  ELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYG 129
           ++YRRGSF EALSLYDRAI + P NAAYRSNRAAALTAL RLGEAV+EC EAVR+D  Y 
Sbjct: 230 DMYRRGSFSEALSLYDRAILISPGNAAYRSNRAAALTALRRLGEAVKECLEAVRIDPSYS 289

Query: 130 RAHQRLAALYLR 142
           RAHQRLA+LYLR
Sbjct: 290 RAHQRLASLYLR 300

HSP 2 Score: 39.3 bits (90), Expect = 2.4e-03
Identity = 24/71 (33.80%), Postives = 31/71 (43.66%), Query Frame = 1


Query: 69  NELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGY 128
           NEL+  G F EA   Y   +     N+    NRAA    LG   ++V +C  A++    Y
Sbjct: 466 NELFSSGRFSEACVAYGDGLKQDDSNSVLYCNRAACWYKLGLWEKSVEDCNHALKSQPSY 525

Query: 129 GRAHQRLAALY 140
            +A  R AA Y
Sbjct: 526 IKALLRRAASY 536

[Close]

BLAST of MELO3C009817 vs. TAIR10
Match: AT3G58620.1 (AT3G58620.1 tetratricopetide-repeat thioredoxin-like 4)

HSP 1 Score: 129.4 bits (324), Expect = 1.7e-30
Identity = 76/136 (55.88%), Postives = 86/136 (63.24%), Query Frame = 1


Query: 17  SLSPSSSTAKLGS-------PGNLAEG--NLGSGNL--QFGSETWVVKRAMASSDSEEVK 76
           ++ PS    K G        P  L  G  N G GN+    G  +   K A   SDSEEVK
Sbjct: 156 NICPSGRILKTGMATRASVRPETLCTGTANYGHGNIIRTGGKVSHATKAAAEMSDSEEVK 215

Query: 77  RAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLD 136
           +A N +YR+G++ EAL+LYDRAISL PEN AYRSNRAAAL A GRL EAV+EC EAVR D
Sbjct: 216 KAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEAVKECLEAVRCD 275

Query: 137 LGYGRAHQRLAALYLR 142
             Y RAHQRLA+LYLR
Sbjct: 276 PSYARAHQRLASLYLR 291

HSP 2 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 25/77 (32.47%), Postives = 36/77 (46.75%), Query Frame = 1


Query: 63  EVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAV 122
           + +   NEL+  G + EA   Y   + L   N+    NRAA    LG   ++V +C +A+
Sbjct: 451 KARTRGNELFSSGRYSEASVAYGDGLKLDAFNSVLYCNRAACWFKLGMWEKSVDDCNQAL 510

Query: 123 RLDLGYGRAHQRLAALY 140
           R+   Y +A  R AA Y
Sbjct: 511 RIQPSYTKALLRRAASY 527

[Close]

BLAST of MELO3C009817 vs. TAIR10
Match: AT3G14950.1 (AT3G14950.1 tetratricopetide-repeat thioredoxin-like 2)

HSP 1 Score: 111.3 bits (277), Expect = 4.9e-25
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1


Query: 53  KRAMASSDSEEVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLG 112
           K A+  S+ EEVKR  NE++R+G F EAL LYDRAI L P NA Y SNRAAAL++LG++G
Sbjct: 250 KIAIYGSNPEEVKRFGNEMFRKGCFAEALKLYDRAIELSPSNATYHSNRAAALSSLGQIG 309

Query: 113 EAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           EAV ECE A++LD  + RAH RLA+L LR
Sbjct: 310 EAVNECEIAIKLDPNFARAHHRLASLLLR 338

[Close]

BLAST of MELO3C009817 vs. TAIR10
Match: AT5G10090.1 (AT5G10090.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.9e-21
Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1


Query: 60  DSEEVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECE 119
           D E +K   NE Y+ G+F EAL+LY+ AIS+ P+ A+YRSN++AALTALGR+ EAV EC 
Sbjct: 236 DPETLKIMGNEDYKNGNFAEALALYEAAISIDPKKASYRSNKSAALTALGRILEAVFECR 295

Query: 120 EAVRLDLGYGRAHQRLAALYLR 142
           EA+R+D  Y RAH RLA LYLR
Sbjct: 296 EAIRIDPHYHRAHHRLANLYLR 317

HSP 2 Score: 42.4 bits (98), Expect = 2.8e-04
Identity = 25/86 (29.07%), Postives = 41/86 (47.67%), Query Frame = 1


Query: 51  VVKRAMASSDSEEVKRAANELYRRGSFVEALSLYDRAISLFPENAAYRSNRAAALTALGR 110
           V++RA A + +   +   N+ ++ G F EA + Y   +     N+    NRAA L+ +G+
Sbjct: 464 VLRRAQAVTAA---RSRGNDFFKAGRFQEACTAYGEGLDHDSRNSVLLCNRAACLSKMGQ 523

Query: 111 LGEAVRECEEAVRLDLGYGRAHQRLA 137
              AV +   A+ +  GY +A  R A
Sbjct: 524 FDRAVEDTSAALAVRPGYTKARLRRA 546

[Close]

BLAST of MELO3C009817 vs. NCBI nr
Match: gi|659085718|ref|XP_008443565.1| (PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like, partial [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 9.5e-55
Identity = 114/117 (97.44%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 25  AKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLY 84
           AKLGSPGNLAEGNLGSGNLQFGSET VVKR MASSDSEEVKRAANELYRRGSFVEALSLY
Sbjct: 188 AKLGSPGNLAEGNLGSGNLQFGSETLVVKRTMASSDSEEVKRAANELYRRGSFVEALSLY 247

Query: 85  DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRL+ALYLR
Sbjct: 248 DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLSALYLR 304

[Close]

BLAST of MELO3C009817 vs. NCBI nr
Match: gi|659110521|ref|XP_008455268.1| (PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-54
Identity = 114/121 (94.21%), Postives = 115/121 (95.04%), Query Frame = 1


Query: 21  SSSTAKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEA 80
           S   AKLGSPGNLAEGN GSGN+QFGSET VVKRAMASSD EEVKRAANELYRRGSFVEA
Sbjct: 214 SGGGAKLGSPGNLAEGNFGSGNIQFGSETLVVKRAMASSDPEEVKRAANELYRRGSFVEA 273

Query: 81  LSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYL 140
           LSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYL
Sbjct: 274 LSLYDRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYL 333

Query: 141 R 142
           R
Sbjct: 334 R 334

[Close]

BLAST of MELO3C009817 vs. NCBI nr
Match: gi|449438143|ref|XP_004136849.1| (PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 4.7e-54
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 26  KLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLYD 85
           KLGSPGNLAEGN GSGNLQFGSET VVKRAMASSD EEVKRAANELYRRGSFVEALSLYD
Sbjct: 219 KLGSPGNLAEGNFGSGNLQFGSETLVVKRAMASSDPEEVKRAANELYRRGSFVEALSLYD 278

Query: 86  RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR
Sbjct: 279 RAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 334

[Close]

BLAST of MELO3C009817 vs. NCBI nr
Match: gi|147772786|emb|CAN62839.1| (hypothetical protein VITISV_003392 [Vitis vinifera])

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40
Identity = 90/117 (76.92%), Postives = 103/117 (88.03%), Query Frame = 1


Query: 25  AKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLY 84
           AKL SP ++A+ N+ +GN+QF  E+ +VKRAM SSD EEVK+A NELYRRGSF EALSLY
Sbjct: 214 AKLSSPRSIADVNM-TGNIQFAGESVMVKRAMGSSDPEEVKKAGNELYRRGSFTEALSLY 273

Query: 85  DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           DRAISL P+NAAYRSNRAAALTALG+L EAV+ECEEAVRLD GYGRAHQRLA+LYLR
Sbjct: 274 DRAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLR 329

[Close]

BLAST of MELO3C009817 vs. NCBI nr
Match: gi|731408984|ref|XP_002276519.2| (PREDICTED: inactive TPR repeat-containing thioredoxin TTL3 [Vitis vinifera])

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40
Identity = 90/117 (76.92%), Postives = 103/117 (88.03%), Query Frame = 1


Query: 25  AKLGSPGNLAEGNLGSGNLQFGSETWVVKRAMASSDSEEVKRAANELYRRGSFVEALSLY 84
           AKL SP ++A+ N+ +GN+QF  E+ +VKRAM SSD EEVK+A NELYRRGSF EALSLY
Sbjct: 214 AKLSSPRSIADVNM-TGNIQFAGESVMVKRAMGSSDPEEVKKAGNELYRRGSFTEALSLY 273

Query: 85  DRAISLFPENAAYRSNRAAALTALGRLGEAVRECEEAVRLDLGYGRAHQRLAALYLR 142
           DRAISL P+NAAYRSNRAAALTALG+L EAV+ECEEAVRLD GYGRAHQRLA+LYLR
Sbjct: 274 DRAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLR 329

The following BLAST results are available for this feature:

BLAST of MELO3C009817 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TTL1_ARATH	6.2e-30	57.38	TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana GN=TTL1 PE=1 SV=1	[more]
TTL3_ARATH	2.4e-29	56.06	Inactive TPR repeat-containing thioredoxin TTL3 OS=Arabidopsis thaliana GN=TTL3 ...	[more]
TTL4_ARATH	3.1e-29	55.88	TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana GN=TTL4 PE=2 SV=1	[more]
TTL2_ARATH	8.7e-24	61.80	TPR repeat-containing thioredoxin TTL2 OS=Arabidopsis thaliana GN=TTL2 PE=2 SV=2	[more]
SGTA_RAT	5.5e-10	42.31	Small glutamine-rich tetratricopeptide repeat-containing protein alpha OS=Rattus...	[more]

BLAST of MELO3C009817 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K756_CUCSA	3.3e-54	97.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G051360 PE=4 SV=1	[more]
A5AUR7_VITVI	9.3e-41	76.92	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003392 PE=4 SV=1	[more]
F6H4Z5_VITVI	9.3e-41	76.92	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02240 PE=4 SV=...	[more]
M5WNW0_PRUPE	3.4e-35	72.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021003mg PE=4 SV=1	[more]
M5WNW0_PRUPE	2.5e-01	30.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021003mg PE=4 SV=1	[more]

BLAST of MELO3C009817 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53300.1	3.5e-31	57.38	tetratricopetide-repeat thioredoxin-like 1	[more]
AT2G42580.1	1.3e-30	56.06	tetratricopetide-repeat thioredoxin-like 3	[more]
AT3G58620.1	1.7e-30	55.88	tetratricopetide-repeat thioredoxin-like 4	[more]
AT3G14950.1	4.9e-25	61.80	tetratricopetide-repeat thioredoxin-like 2	[more]
AT5G10090.1	1.9e-21	60.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of MELO3C009817 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085718\|ref\|XP_008443565.1\|	9.5e-55	97.44	PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like, partial [Cucumi...	[more]
gi\|659110521\|ref\|XP_008455268.1\|	1.6e-54	94.21	PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cucumis melo]	[more]
gi\|449438143\|ref\|XP_004136849.1\|	4.7e-54	97.41	PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Cucumis sativus...	[more]
gi\|147772786\|emb\|CAN62839.1\|	1.3e-40	76.92	hypothetical protein VITISV_003392 [Vitis vinifera]	[more]
gi\|731408984\|ref\|XP_002276519.2\|	1.3e-40	76.92	PREDICTED: inactive TPR repeat-containing thioredoxin TTL3 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005623	cell
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU65945	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009817T1	MELO3C009817T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU65945	MU65945	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 59..140 score: 4.7
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 61..139 score: 5.32
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 61..141 score: 15
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 61..94 score: 0.74coord: 95..128 score:
IPR019734	Tetratricopeptide repeat	PROFILE	PS50005	TPR	coord: 61..94 score: 8
None	No IPR available	PANTHER	PTHR22904	TPR REPEAT CONTAINING PROTEIN	coord: 51..141 score: 8.9
None	No IPR available	PANTHER	PTHR22904:SF374	TPR REPEAT-CONTAINING THIOREDOXIN TTL1-RELATED	coord: 51..141 score: 8.9
None	No IPR available	PFAM	PF13432	TPR_16	coord: 67..124 score: 1.

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C009817	Cucumber (Gy14) v1	cgymeB558
MELO3C009817	Cucurbita maxima (Rimu)	cmameB229
MELO3C009817	Cucurbita maxima (Rimu)	cmameB753
MELO3C009817	Cucurbita moschata (Rifu)	cmomeB215
MELO3C009817	Cucurbita moschata (Rifu)	cmomeB745
MELO3C009817	Wild cucumber (PI 183967)	cpimeB214
MELO3C009817	Cucumber (Chinese Long) v2	cumeB223
MELO3C009817	Watermelon (Charleston Gray)	mewcgB315
MELO3C009817	Watermelon (97103) v1	mewmB346
MELO3C009817	Cucurbita pepo (Zucchini)	cpemeB572
MELO3C009817	Bottle gourd (USVL1VR-Ls)	lsimeB260
MELO3C009817	Cucumber (Gy14) v2	cgybmeB184
MELO3C009817	Silver-seed gourd	carmeB0323
MELO3C009817	Silver-seed gourd	carmeB0443
MELO3C009817	Cucumber (Chinese Long) v3	cucmeB218
MELO3C009817	Watermelon (97103) v2	mewmbB316
MELO3C009817	Wax gourd	mewgoB377
MELO3C009817	Wax gourd	mewgoB380