CU124500 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU124500
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Domain of Uncharacterized protein function 724 6, putative isoform 1
Location	Chr7 : 15870565 .. 15870824 (-)
Sequence length	264

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAATTTGGATCCCCTTCAACTAACACTCACATTCATCACCCCAACAACCATCGTCTTCATCAGTTCCCCTTCACAGTCGGCTCTGAAATCGAGGTCTCCATCGATGAAGAAGGCTTCAAAGGCGCCTTATTCAAAGCTACCATTTTGAAGCTACCCACTATATTTACTCCTTCTAAGAAGAAAAAAGCTTTAGTTGGGTACAAAACCCTTGTCACTGAAGACGGATCTACCCCTTTGAAGGAGCATGTTGATGCT

Library


Library category	ESTs
fruit (8DPP) library	1

Homology

[Close]

BLAST of CU124500 vs. TrEMBL
Match: A0A0A0K5U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412860 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.4e-41
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1


Query: 7   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSK 66
           GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIF+PSK
Sbjct: 2   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFSPSK 61

Query: 67  KKKALVGYKTLVTEDGSTPLKEHVDA 126
           KKKALV YKTLVTEDGSTPLKEHVDA
Sbjct: 62  KKKALVEYKTLVTEDGSTPLKEHVDA 87

Query: 127  186
           
Sbjct: 122  87

Query: 187  246
           
Sbjct: 182  87

Query: 247  265
           
Sbjct: 242  87

[Close]

BLAST of CU124500 vs. TrEMBL
Match: A0A061DTD0_THECC (Domain of Uncharacterized protein function 724 6, putative isoform 1 OS=Theobroma cacao GN=TCM_004869 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-13
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 1


Query: 49  PNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSKKKKALVGYKTLVTE 108
           P+   L Q PF   + +EVS DEEGF+GA + ATIL+ P   T  K+KKALV YKTL+ E
Sbjct: 6   PDTDALQQQPFGKATPVEVSSDEEGFRGAWYLATILEFPPKSTSKKRKKALVQYKTLLAE 65

Query: 109 DGSTPLKEHVD 168
           DGS+PL EHVD
Sbjct: 66  DGSSPLTEHVD 76

Query: 169  228
           
Sbjct: 126  76

Query: 229  262
           
Sbjct: 186  76

[Close]

BLAST of CU124500 vs. TrEMBL
Match: A0A061DSG5_THECC (Domain of Uncharacterized protein function 724 6, putative isoform 2 OS=Theobroma cacao GN=TCM_004869 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-13
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 1


Query: 49  PNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSKKKKALVGYKTLVTE 108
           P+   L Q PF   + +EVS DEEGF+GA + ATIL+ P   T  K+KKALV YKTL+ E
Sbjct: 6   PDTDALQQQPFGKATPVEVSSDEEGFRGAWYLATILEFPPKSTSKKRKKALVQYKTLLAE 65

Query: 109 DGSTPLKEHVD 168
           DGS+PL EHVD
Sbjct: 66  DGSSPLTEHVD 76

Query: 169  228
           
Sbjct: 126  76

Query: 229  262
           
Sbjct: 186  76

[Close]

BLAST of CU124500 vs. TrEMBL
Match: A0A061DZA7_THECC (Domain of Uncharacterized protein function 724 6, putative isoform 3 OS=Theobroma cacao GN=TCM_004869 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-13
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 1


Query: 49  PNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSKKKKALVGYKTLVTE 108
           P+   L Q PF   + +EVS DEEGF+GA + ATIL+ P   T  K+KKALV YKTL+ E
Sbjct: 6   PDTDALQQQPFGKATPVEVSSDEEGFRGAWYLATILEFPPKSTSKKRKKALVQYKTLLAE 65

Query: 109 DGSTPLKEHVD 168
           DGS+PL EHVD
Sbjct: 66  DGSSPLTEHVD 76

Query: 169  228
           
Sbjct: 126  76

Query: 229  262
           
Sbjct: 186  76

[Close]

BLAST of CU124500 vs. TrEMBL
Match: M5X9F6_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019960mg PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-13
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = 1


Query: 52  NNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSKKKKALVGYKTLVTED 111
           N H+     F+VGS +EV  DEEGFKGA F+ATI+  PT     K+K+ALV YK+LVTED
Sbjct: 7   NEHQQQLQLFSVGSAVEVRSDEEGFKGAWFRATIVTSPTNLASKKRKRALVEYKSLVTED 66

Query: 112 GSTPLKEHVDA 171
           GS  LKE+VD+
Sbjct: 67  GSQQLKEYVDS 77

Query: 172  231
           
Sbjct: 127  77

Query: 232  265
           
Sbjct: 187  77

[Close]

BLAST of CU124500 vs. NCBI nr
Match: gi|778728305|ref|XP_011659404.1| (PREDICTED: uncharacterized protein LOC101218122 isoform X2 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1


Query: 7   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSK 66
           GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIF+PSK
Sbjct: 2   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFSPSK 61

Query: 67  KKKALVGYKTLVTEDGSTPLKEHVDA 126
           KKKALV YKTLVTEDGSTPLKEHVDA
Sbjct: 62  KKKALVEYKTLVTEDGSTPLKEHVDA 87

Query: 127  186
           
Sbjct: 122  87

Query: 187  246
           
Sbjct: 182  87

Query: 247  265
           
Sbjct: 242  87

[Close]

BLAST of CU124500 vs. NCBI nr
Match: gi|778728309|ref|XP_011659405.1| (PREDICTED: uncharacterized protein LOC101218122 isoform X3 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1


Query: 7   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSK 66
           GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIF+PSK
Sbjct: 2   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFSPSK 61

Query: 67  KKKALVGYKTLVTEDGSTPLKEHVDA 126
           KKKALV YKTLVTEDGSTPLKEHVDA
Sbjct: 62  KKKALVEYKTLVTEDGSTPLKEHVDA 87

Query: 127  186
           
Sbjct: 122  87

Query: 187  246
           
Sbjct: 182  87

Query: 247  265
           
Sbjct: 242  87

[Close]

BLAST of CU124500 vs. NCBI nr
Match: gi|778728302|ref|XP_011659403.1| (PREDICTED: uncharacterized protein LOC101218122 isoform X1 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-40
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 1


Query: 7   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSK 66
           GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIF+PSK
Sbjct: 2   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFSPSK 61

Query: 67  KKKALVGYKTLVTEDGSTPLKEHVDA 126
           KKKALV YKTLVTEDGSTPLKEHVDA
Sbjct: 62  KKKALVEYKTLVTEDGSTPLKEHVDA 87

Query: 127  186
           
Sbjct: 122  87

Query: 187  246
           
Sbjct: 182  87

Query: 247  265
           
Sbjct: 242  87

[Close]

BLAST of CU124500 vs. NCBI nr
Match: gi|659101137|ref|XP_008451446.1| (PREDICTED: uncharacterized protein LOC103492739 isoform X2 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-36
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1


Query: 7   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSK 66
           GEFGSP+TNTH HH NNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPT F+PSK
Sbjct: 2   GEFGSPATNTHTHHHNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTTFSPSK 61

Query: 67  KKKALVGYKTLVTEDGSTPLKEHVDA 126
           +KKALV YKTLVTEDGS+PLKE VDA
Sbjct: 62  RKKALVEYKTLVTEDGSSPLKEQVDA 87

Query: 127  186
           
Sbjct: 122  87

Query: 187  246
           
Sbjct: 182  87

Query: 247  265
           
Sbjct: 242  87

[Close]

BLAST of CU124500 vs. NCBI nr
Match: gi|659101139|ref|XP_008451447.1| (PREDICTED: uncharacterized protein LOC103492739 isoform X3 [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 2.1e-36
Identity = 77/86 (89.53%), Postives = 81/86 (94.19%), Query Frame = 1


Query: 7   GEFGSPSTNTHIHHPNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTIFTPSK 66
           GEFGSP+TNTH HH NNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPT F+PSK
Sbjct: 2   GEFGSPATNTHTHHHNNHRLHQFPFTVGSEIEVSIDEEGFKGALFKATILKLPTTFSPSK 61

Query: 67  KKKALVGYKTLVTEDGSTPLKEHVDA 126
           +KKALV YKTLVTEDGS+PLKE VDA
Sbjct: 62  RKKALVEYKTLVTEDGSSPLKEQVDA 87

Query: 127  186
           
Sbjct: 122  87

Query: 187  246
           
Sbjct: 182  87

Query: 247  265
           
Sbjct: 242  87

The following BLAST results are available for this feature:

BLAST of CU124500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5U9_CUCSA	4.4e-41	97.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412860 PE=4 SV=1	[more]
A0A061DTD0_THECC	3.9e-13	57.75	Domain of Uncharacterized protein function 724 6, putative isoform 1 OS=Theobrom...	[more]
A0A061DSG5_THECC	3.9e-13	57.75	Domain of Uncharacterized protein function 724 6, putative isoform 2 OS=Theobrom...	[more]
A0A061DZA7_THECC	3.9e-13	57.75	Domain of Uncharacterized protein function 724 6, putative isoform 3 OS=Theobrom...	[more]
M5X9F6_PRUPE	8.7e-13	57.75	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019960mg PE=4 S...	[more]

BLAST of CU124500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778728305\|ref\|XP_011659404.1\|	1.1e-40	97.67	PREDICTED: uncharacterized protein LOC101218122 isoform X2 [Cucumis sativus]	[more]
gi\|778728309\|ref\|XP_011659405.1\|	1.1e-40	97.67	PREDICTED: uncharacterized protein LOC101218122 isoform X3 [Cucumis sativus]	[more]
gi\|778728302\|ref\|XP_011659403.1\|	1.1e-40	97.67	PREDICTED: uncharacterized protein LOC101218122 isoform X1 [Cucumis sativus]	[more]
gi\|659101137\|ref\|XP_008451446.1\|	2.1e-36	89.53	PREDICTED: uncharacterized protein LOC103492739 isoform X2 [Cucumis melo]	[more]
gi\|659101139\|ref\|XP_008451447.1\|	2.1e-36	89.53	PREDICTED: uncharacterized protein LOC103492739 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR008395	Agenet-like_dom

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa7G412860	Csa7G412860	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02KZLVX	FKNP3UI02KZLVX	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008395	Agenet-like domain	PFAM	PF05641	Agenet	coord: 30..88 score: 8.8