CU140149 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
GGAGGTTTGCGGCCGCGTTTGAGAAGCACGAGAAGAGATATAGGTAGTAAAATTACGGTGGAGGTCCTGCGGTGGAGGGCGGCGCTCACGGAGGCCGCTAGCTTGTCCGGCTGGGACTTGAGGCAGCTAGCCGATGGGCATGAAGGAAAATTCATACAGAAAATAGTGGAAAGGGTTCAAAGCGAACTGCGAGTGACATATTTGGAAGTCGCCATCTACCCTGTTGGCAT
BLAST of CU140149 vs. TrEMBL
Match: A0A0A0LJJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074250 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 2.8e-23 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1
BLAST of CU140149 vs. TrEMBL
Match: A0A0A0LJJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074250 PE=4 SV=1) HSP 1 Score: 31.2 bits (69), Expect = 6.8e+02 Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 3
HSP 2 Score: 82.4 bits (202), Expect = 2.6e-13 Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1
BLAST of CU140149 vs. TrEMBL
Match: U7E0N2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0182s00200g PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 5.7e-13 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 1
BLAST of CU140149 vs. TrEMBL
Match: M5XI94_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022336mg PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 9.8e-13 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = 1
BLAST of CU140149 vs. TrEMBL
Match: U5FF18_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0019s01570g PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 9.8e-13 Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 1
BLAST of CU140149 vs. NCBI nr
Match: gi|778674089|ref|XP_004152878.2| (PREDICTED: TMV resistance protein N-like [Cucumis sativus]) HSP 1 Score: 115.5 bits (288), Expect = 3.9e-23 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1
BLAST of CU140149 vs. NCBI nr
Match: gi|700206145|gb|KGN61264.1| (hypothetical protein Csa_2G074250 [Cucumis sativus]) HSP 1 Score: 115.5 bits (288), Expect = 3.9e-23 Identity = 57/58 (98.28%), Postives = 58/58 (100.00%), Query Frame = 1
BLAST of CU140149 vs. NCBI nr
Match: gi|659082460|ref|XP_008441852.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo]) HSP 1 Score: 110.9 bits (276), Expect = 9.7e-22 Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 1
BLAST of CU140149 vs. NCBI nr
Match: gi|703067510|ref|XP_010087987.1| (TMV resistance protein N [Morus notabilis]) HSP 1 Score: 82.4 bits (202), Expect = 3.7e-13 Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 1
BLAST of CU140149 vs. NCBI nr
Match: gi|659085381|ref|XP_008443388.1| (PREDICTED: TMV resistance protein N [Cucumis melo]) HSP 1 Score: 82.0 bits (201), Expect = 4.8e-13 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
|