CU140760 (transcribed_cluster) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
ACAGTATGATCATAAGACCCAGTGATAAACATGTCCATGCTAGCTGGGGAGCAGGCTCCACATCTCACATAGTCCTTATGGCCCAAAAAATCTGAAATTGGAGTCTGACTTGCCACATCCCAGTACTTAACGACTGCATCATCCCCACCAGATACCAAGTGGAGCTTATCAAGAACGGGGTACTGGACAAATTGAACTGGACGTGAGTGTGAACGAAG
BLAST of CU140760 vs. Swiss-Prot
Match: SWA1_ARATH (Protein SLOW WALKER 1 OS=Arabidopsis thaliana GN=SWA1 PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.3e-27 Identity = 55/72 (76.39%), Postives = 57/72 (79.17%), Query Frame = -1
BLAST of CU140760 vs. Swiss-Prot
Match: UTP15_BOVIN (U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus GN=UTP15 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.5e-13 Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = -1
BLAST of CU140760 vs. Swiss-Prot
Match: UTP15_HUMAN (U3 small nucleolar RNA-associated protein 15 homolog OS=Homo sapiens GN=UTP15 PE=1 SV=3) HSP 1 Score: 75.1 bits (183), Expect = 3.5e-13 Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = -1
BLAST of CU140760 vs. Swiss-Prot
Match: UTP15_RAT (U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus norvegicus GN=Utp15 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.6e-13 Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = -1
HSP 2 Score: 47.4 bits (111), Expect = 7.8e-05 Identity = 27/94 (28.72%), Postives = 36/94 (38.30%), Query Frame = -1
BLAST of CU140760 vs. Swiss-Prot
Match: UTP15_PONAB (U3 small nucleolar RNA-associated protein 15 homolog OS=Pongo abelii GN=UTP15 PE=2 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.6e-13 Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = -1
BLAST of CU140760 vs. TrEMBL
Match: A0A0A0K5R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G390220 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 3.0e-35 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = -1
BLAST of CU140760 vs. TrEMBL
Match: M5XRZ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003776mg PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.6e-28 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = -1
BLAST of CU140760 vs. TrEMBL
Match: A0A067KXL4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08356 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.3e-26 Identity = 53/72 (73.61%), Postives = 63/72 (87.50%), Query Frame = -1
BLAST of CU140760 vs. TrEMBL
Match: A0A061DQB4_THECC (Transducin family protein / WD-40 repeat family protein OS=Theobroma cacao GN=TCM_004505 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.6e-26 Identity = 54/72 (75.00%), Postives = 64/72 (88.89%), Query Frame = -1
BLAST of CU140760 vs. TrEMBL
Match: A0A0D2P7A2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G054300 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.6e-26 Identity = 53/72 (73.61%), Postives = 64/72 (88.89%), Query Frame = -1
BLAST of CU140760 vs. NCBI nr
Match: gi|449462302|ref|XP_004148880.1| (PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Cucumis sativus]) HSP 1 Score: 158.7 bits (400), Expect = 3.9e-36 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = -1
BLAST of CU140760 vs. NCBI nr
Match: gi|659101087|ref|XP_008451418.1| (PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Cucumis melo]) HSP 1 Score: 158.7 bits (400), Expect = 3.9e-36 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = -1
BLAST of CU140760 vs. NCBI nr
Match: gi|694440585|ref|XP_009347103.1| (PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Pyrus x bretschneideri]) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-29 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = -1
BLAST of CU140760 vs. NCBI nr
Match: gi|645231550|ref|XP_008222448.1| (PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog [Prunus mume]) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = -1
BLAST of CU140760 vs. NCBI nr
Match: gi|596170855|ref|XP_007223119.1| (hypothetical protein PRUPE_ppa003776mg [Prunus persica]) HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29 Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = -1
The following BLAST results are available for this feature:
The following terms have been associated with this transcribed_cluster:
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
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