MELO3C004586 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C004586
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRING finger protein 126
Locationchr5 : 27794731 .. 27795355 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTATATATAATACTCATATTGTAGCTAAGGAAAATATTGAAATCTTCTTACAAATCTCTCGATAGTTTTCCTTTTCCTGTTATAACAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTCTATTACTTCCACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAAATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAGTTTGGTTAGTTTTGTTTTGTGCTAAATTTGAATATGAGATTTGGGATTCGGTTATCGTTATTCAATCAAAATGTGGTAAGATTCAAAAACTCACATTCTGAACAACTTGTATTCAACGATTACTAAGAGCAGACAAATTTTTAATGTTTATCGTTCTAACGAATC

mRNA sequence

ACTTATATATAATACTCATATTGTAGCTAAGGAAAATATTGAAATCTTCTTACAAATCTCTCGATAGTTTTCCTTTTCCTGTTATAACAAAAATAAACAAATACTGATCTCCATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTCTATTACTTCCACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAAATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAGTTTGGTTAGTTTTGTTTTGTGCTAAATTTGAATATGAGATTTGGGATTCGGTTATCGTTATTCAATCAAAATGTGGTAAGATTCAAAAACTCACATTCTGAACAACTTGTATTCAACGATTACTAAGAGCAGACAAATTTTTAATGTTTATCGTTCTAACGAATC

Coding sequence (CDS)

ATGGCTACATCAGCTAATCATGCAGCTAGGTACATCATGGACATTGAATCAATGTTCGATCTCGACACGGTCCTCAGCGGAGCTGATGACTTCTATTACTTCCACACCGCTGTAGCGCCCCCACCCGTGGTGGTTGCTGACTTACCGACCGTGGCTACGGACGATGCATGTGCGGTTTGTATGGAGGATTTTCTACCGGATGAAGGCGGTAAACAAATCCCATGTGGCCATGTTTACCATCAATCTTGTATATCGTCTTGGCTCTCCGTCGGCGATTCTTGTCCTCTCTGCCGCCGTCATATCGCCCCCGGCGACAAAACGGAGACTTCCAAAACCGTACAAGTTTAG

Protein sequence

MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV*
Homology
[Close]
BLAST of MELO3C004586 vs. Swiss-Prot
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 6.9e-11
Identity = 31/85 (36.47%), Postives = 43/85 (50.59%), Query Frame = 1 

Query: 40  PPPV---VVADLPTVATDDA-------CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLS 99
           PPP     +  LPTV            C VC ED+  +E  +Q+PC H +H SCI  WL 
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260

Query: 100 VGDSCPLCRRHIAPGDKTETSKTVQ 115
           + D+CP+CR+ +   D T  S++ +
Sbjct: 261 LHDTCPVCRKSLNGEDSTRQSQSTE 285

[Close]
BLAST of MELO3C004586 vs. Swiss-Prot
Match: RN115_MOUSE (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10
Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 1 

Query: 40  PPPV---VVADLPTVA-------TDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLS 99
           PPP     +  LPTV        T   C VC ED+  +E  +Q+PC H +H SCI  WL 
Sbjct: 202 PPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE 261

Query: 100 VGDSCPLCRRHIAPGDKTETSKT 113
           + D+CP+CR+ +   D T  +++
Sbjct: 262 LHDTCPVCRKSLNGEDSTRQTQS 284

[Close]
BLAST of MELO3C004586 vs. Swiss-Prot
Match: PJA2_RAT (E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-10
Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 1 

Query: 40  PPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRR 99
           P  +V+ D   +  +  C +C  +++ D+   ++PC H +H+ C+S WL    +CP+CRR
Sbjct: 616 PETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 675

Query: 100 HIAP 104
           H  P
Sbjct: 676 HFPP 679

[Close]
BLAST of MELO3C004586 vs. Swiss-Prot
Match: PJA2_PONAB (E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-10
Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 1 

Query: 40  PPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRR 99
           P  +V+ D   +  +  C +C  +++ D+   ++PC H +H+ C+S WL    +CP+CRR
Sbjct: 617 PETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 676

Query: 100 HIAP 104
           H  P
Sbjct: 677 HFPP 680

[Close]
BLAST of MELO3C004586 vs. Swiss-Prot
Match: PJA2_MOUSE (E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 5.8e-10
Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 1 

Query: 40  PPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRR 99
           P  +V+ D   +  +  C +C  +++ D+   ++PC H +H+ C+S WL    +CP+CRR
Sbjct: 616 PETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRR 675

Query: 100 HIAP 104
           H  P
Sbjct: 676 HFPP 679

[Close]
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A0A0LEZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000920 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.1e-54
Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 1 

Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVAT-DDACAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYYFHT VAPPPV+VA+LPTVA  DD CAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A0A0LKR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000930 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.5e-24
Identity = 60/95 (63.16%), Postives = 67/95 (70.53%), Query Frame = 1 

Query: 15  IESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIP 74
           IE +FDLDTVLSGADD       + P    VAD PTV  D  CAVC++DF PDE GKQIP
Sbjct: 20  IEFLFDLDTVLSGADDLGCCQ--ITPSDSPVADFPTVVAD-VCAVCLDDFHPDEAGKQIP 79

Query: 75  CGHVYHQSCISSWLSVGDSCPLCRRHIA--PGDKT 108
           CGHVYH+SCISSWL+V D CPLCR  +A  P D T
Sbjct: 80  CGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST 111

[Close]
BLAST of MELO3C004586 vs. TrEMBL
Match: D7TBH2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03190 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-16
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1 

Query: 15  IESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIP 74
           I+  FDLD  ++  DD     + ++    +V+ +PTV   DAC VC E F   EGGKQ+P
Sbjct: 82  IDLCFDLDLAITAVDDT----SEISKSTSMVSTMPTVTAVDACTVCREGFQSGEGGKQLP 141

Query: 75  CGHVYHQSCISSWLSVGDSCPLCRRHIAPGD 106
           CGH YH  CI+SWLS+ +SCPLCR  + PG+
Sbjct: 142 CGHFYHAGCIASWLSLRNSCPLCRCSV-PGE 167

[Close]
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A067KCF7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07378 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-15
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1 

Query: 15  IESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATD-DACAVCMEDFLPDEGGKQI 74
           I+  FD+D  L+   +F +    V+    ++AD+PTV+TD D C++CME F     GK++
Sbjct: 17  IDVSFDMDEALTLPPNFGH---QVSVSESLIADMPTVSTDHDTCSICMESFESGRAGKRV 76

Query: 75  PCGHVYHQSCISSWLSVGDSCPLCRRHIA 103
           PCGHVYH +CISSWLS  +SCPLCR +I+
Sbjct: 77  PCGHVYHAACISSWLSNCNSCPLCRCNIS 102

[Close]
BLAST of MELO3C004586 vs. TrEMBL
Match: A0A067KPM6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07310 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-15
Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1 

Query: 13  MDIESMFDLDTVLSGADDFYYFHTAVAPPPV--VVADLPTVAT-DDACAVCMEDFLPDEG 72
           M +   FDL    SG D+        A   +  ++A +PTV+T D+ C VCME F    G
Sbjct: 19  MAVNISFDLHETPSGTDNLSRRSRITAASSINDLIAGMPTVSTNDEVCIVCMEGFRSSVG 78

Query: 73  GKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPG 105
           GK+IPCGH+YH  CISSWL   +SCPLCR +I+ G
Sbjct: 79  GKRIPCGHIYHSDCISSWLCRSNSCPLCRINISDG 113

[Close]
BLAST of MELO3C004586 vs. TAIR10
Match: AT4G26400.2 (AT4G26400.2 RING/U-box superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 1 

Query: 28  ADDFYYFHTAVAPPPVVVADLPTVATDDA--CAVCMEDFLPDEGGKQIPCGHVYHQSCIS 87
           AD+    H ++     VV +LPTV   ++  C++C++DF      K++PC H +H  CI 
Sbjct: 210 ADNDSIRHGSLPARKEVVDNLPTVKISESLQCSICLDDFDKGSEAKEMPCKHKFHIRCIV 269

Query: 88  SWLSVGDSCPLCRRHIAPGDKTETS 111
            WL +  SCP+CR  + P D+T+ +
Sbjct: 270 PWLELHSSCPVCRYELPPDDETKVN 294

[Close]
BLAST of MELO3C004586 vs. TAIR10
Match: AT3G60080.1 (AT3G60080.1 RING/U-box superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 1 

Query: 41  PPVVVADLPTVATDDA-------CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDS 99
           P + ++     +TDD+       CAVC EDF+  E  +++PC H+YH  CI  WLS  +S
Sbjct: 146 PTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNS 205

[Close]
BLAST of MELO3C004586 vs. TAIR10
Match: AT2G39720.1 (AT2G39720.1 RING-H2 finger C2A)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 1 

Query: 36  TAVAPPPVVVADLPTVATDDA---CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGD 95
           +A+   P++  D PT    D+   CAVC E+F+     +++PC H+YH  CI  WL++ +
Sbjct: 178 SAIEALPLIEID-PTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRN 237

Query: 96  SCPLCRRHIAPGDKTE 109
           SCP+CR  +   D T+
Sbjct: 238 SCPVCRHELPAEDLTD 252

[Close]
BLAST of MELO3C004586 vs. TAIR10
Match: AT1G68180.1 (AT1G68180.1 RING/U-box superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.3e-11
Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 1 

Query: 38  VAPPPVVVADLPTVAT----------DDACAVCMEDFLPDEGGKQIPCGHVYHQSCISSW 97
           + PPP   + +  V T          +  CA+C E+F   E GK++ C H+YH SCI SW
Sbjct: 109 IGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSW 168

Query: 98  LSVGDSCPLCRRHIAPG 105
           L++ ++CP+CR  +  G
Sbjct: 169 LNIHNTCPICRFEVNLG 185

[Close]
BLAST of MELO3C004586 vs. TAIR10
Match: AT2G44330.1 (AT2G44330.1 RING/U-box superfamily protein)

HSP 1 Score: 64.3 bits (155), Expect = 5.6e-11
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1 

Query: 48  LPTVATDDA---CAVCMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCR 99
           L + ++DD+   CA+C EDF+  E  +++PC H+YH  CI  WL+  +SCPLCR
Sbjct: 84  LSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCR 137

[Close]
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|778673949|ref|XP_011650093.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 3.0e-54
Identity = 103/116 (88.79%), Postives = 109/116 (93.97%), Query Frame = 1 

Query: 1   MATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVAT-DDACAV 60
           MATSAN+AA YIMDIESMFDLDTVL+GADDFYYFHT VAPPPV+VA+LPTVA  DD CAV
Sbjct: 1   MATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAV 60

Query: 61  CMEDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 116
           CMEDFLPDEGGKQIPCGHVYHQSC+SSWLS+ DSCPLCR HIAPGDKTETSKTVQV
Sbjct: 61  CMEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|449466270|ref|XP_004150849.1| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis sativus])

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-23
Identity = 60/95 (63.16%), Postives = 67/95 (70.53%), Query Frame = 1 

Query: 15  IESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIP 74
           IE +FDLDTVLSGADD       + P    VAD PTV  D  CAVC++DF PDE GKQIP
Sbjct: 20  IEFLFDLDTVLSGADDLGCCQ--ITPSDSPVADFPTVVAD-VCAVCLDDFHPDEAGKQIP 79

Query: 75  CGHVYHQSCISSWLSVGDSCPLCRRHIA--PGDKT 108
           CGHVYH+SCISSWL+V D CPLCR  +A  P D T
Sbjct: 80  CGHVYHESCISSWLTVADCCPLCRCLVAGQPPDST 111

[Close]
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|731406754|ref|XP_003633119.2| (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Vitis vinifera])

HSP 1 Score: 92.0 bits (227), Expect = 7.1e-16
Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 1 

Query: 15  IESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCMEDFLPDEGGKQIP 74
           I+  FDLD  ++  DD     + ++    +V+ +PTV   DAC VC E F   EGGKQ+P
Sbjct: 82  IDLCFDLDLAITAVDDT----SEISKSTSMVSTMPTVTAVDACTVCREGFQSGEGGKQLP 141

Query: 75  CGHVYHQSCISSWLSVGDSCPLCRRHIAPGD 106
           CGH YH  CI+SWLS+ +SCPLCR  + PG+
Sbjct: 142 CGHFYHAGCIASWLSLRNSCPLCRCSV-PGE 167

[Close]
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|643724606|gb|KDP33807.1| (hypothetical protein JCGZ_07378 [Jatropha curcas])

HSP 1 Score: 90.1 bits (222), Expect = 2.7e-15
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 1 

Query: 15  IESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATD-DACAVCMEDFLPDEGGKQI 74
           I+  FD+D  L+   +F +    V+    ++AD+PTV+TD D C++CME F     GK++
Sbjct: 17  IDVSFDMDEALTLPPNFGH---QVSVSESLIADMPTVSTDHDTCSICMESFESGRAGKRV 76

Query: 75  PCGHVYHQSCISSWLSVGDSCPLCRRHIA 103
           PCGHVYH +CISSWLS  +SCPLCR +I+
Sbjct: 77  PCGHVYHAACISSWLSNCNSCPLCRCNIS 102

[Close]
BLAST of MELO3C004586 vs. NCBI nr
Match: gi|643724538|gb|KDP33739.1| (hypothetical protein JCGZ_07310 [Jatropha curcas])

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-15
Identity = 44/95 (46.32%), Postives = 57/95 (60.00%), Query Frame = 1 

Query: 13  MDIESMFDLDTVLSGADDFYYFHTAVAPPPV--VVADLPTVAT-DDACAVCMEDFLPDEG 72
           M +   FDL    SG D+        A   +  ++A +PTV+T D+ C VCME F    G
Sbjct: 19  MAVNISFDLHETPSGTDNLSRRSRITAASSINDLIAGMPTVSTNDEVCIVCMEGFRSSVG 78

Query: 73  GKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPG 105
           GK+IPCGH+YH  CISSWL   +SCPLCR +I+ G
Sbjct: 79  GKRIPCGHIYHSDCISSWLCRSNSCPLCRINISDG 113

The following BLAST results are available for this feature:
BLAST of MELO3C004586 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RN115_HUMAN6.9e-1136.47E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2[more]
RN115_MOUSE2.0e-1037.35E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1 SV=1[more]
PJA2_RAT5.8e-1032.81E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2 PE=2 SV=1[more]
PJA2_PONAB5.8e-1032.81E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2 SV=1[more]
PJA2_MOUSE5.8e-1032.81E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1 SV=2[more]
BLAST of MELO3C004586 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEZ1_CUCSA2.1e-5488.79Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000920 PE=4 SV=1[more]
A0A0A0LKR7_CUCSA8.5e-2463.16Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000930 PE=4 SV=1[more]
D7TBH2_VITVI5.0e-1647.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03190 PE=4 SV=... [more]
A0A067KCF7_JATCU1.9e-1548.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07378 PE=4 SV=1[more]
A0A067KPM6_JATCU4.2e-1546.32Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07310 PE=4 SV=1[more]
BLAST of MELO3C004586 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G26400.21.1e-1135.29 RING/U-box superfamily protein[more]
AT3G60080.11.5e-1143.08 RING/U-box superfamily protein[more]
AT2G39720.13.3e-1136.84 RING-H2 finger C2A[more]
AT1G68180.14.3e-1136.36 RING/U-box superfamily protein[more]
AT2G44330.15.6e-1146.30 RING/U-box superfamily protein[more]
BLAST of MELO3C004586 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778673949|ref|XP_011650093.1|3.0e-5488.79PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus][more]
gi|449466270|ref|XP_004150849.1|1.2e-2363.16PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis sativus][more]
gi|731406754|ref|XP_003633119.2|7.1e-1647.25PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Vitis vinifera][more]
gi|643724606|gb|KDP33807.1|2.7e-1548.31hypothetical protein JCGZ_07378 [Jatropha curcas][more]
gi|643724538|gb|KDP33739.1|6.0e-1546.32hypothetical protein JCGZ_07310 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C004586T1MELO3C004586T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 56..98
score: 6.3
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 57..97
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 57..98
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 53..101
score: 2.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 45..105
score: 1.1
NoneNo IPR availablePANTHERPTHR22763:SF87SUBFAMILY NOT NAMEDcoord: 45..105
score: 1.1
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 51..103
score: 1.79

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C004586Silver-seed gourdcarmeB0039
MELO3C004586Silver-seed gourdcarmeB0097
MELO3C004586Silver-seed gourdcarmeB0209
MELO3C004586Silver-seed gourdcarmeB0577
MELO3C004586Silver-seed gourdcarmeB0883
MELO3C004586Cucumber (Chinese Long) v3cucmeB142
MELO3C004586Watermelon (97103) v2mewmbB373
MELO3C004586Watermelon (97103) v2mewmbB380
MELO3C004586Watermelon (97103) v2mewmbB404
MELO3C004586Wax gourdmewgoB471
MELO3C004586Wax gourdmewgoB494
MELO3C004586Melon (DHL92) v3.5.1memeB105
MELO3C004586Melon (DHL92) v3.5.1memeB136
MELO3C004586Cucumber (Gy14) v1cgymeB172
MELO3C004586Cucumber (Gy14) v1cgymeB483
MELO3C004586Cucurbita maxima (Rimu)cmameB074
MELO3C004586Cucurbita maxima (Rimu)cmameB129
MELO3C004586Cucurbita maxima (Rimu)cmameB172
MELO3C004586Cucurbita maxima (Rimu)cmameB735
MELO3C004586Cucurbita moschata (Rifu)cmomeB067
MELO3C004586Cucurbita moschata (Rifu)cmomeB121
MELO3C004586Cucurbita moschata (Rifu)cmomeB161
MELO3C004586Cucurbita moschata (Rifu)cmomeB724
MELO3C004586Wild cucumber (PI 183967)cpimeB069
MELO3C004586Wild cucumber (PI 183967)cpimeB140
MELO3C004586Cucumber (Chinese Long) v2cumeB069
MELO3C004586Cucumber (Chinese Long) v2cumeB140
MELO3C004586Watermelon (Charleston Gray)mewcgB372
MELO3C004586Watermelon (Charleston Gray)mewcgB378
MELO3C004586Watermelon (Charleston Gray)mewcgB401
MELO3C004586Watermelon (97103) v1mewmB401
MELO3C004586Watermelon (97103) v1mewmB409
MELO3C004586Watermelon (97103) v1mewmB421
MELO3C004586Cucurbita pepo (Zucchini)cpemeB099
MELO3C004586Cucurbita pepo (Zucchini)cpemeB343
MELO3C004586Cucurbita pepo (Zucchini)cpemeB633
MELO3C004586Cucurbita pepo (Zucchini)cpemeB772
MELO3C004586Bottle gourd (USVL1VR-Ls)lsimeB116
MELO3C004586Bottle gourd (USVL1VR-Ls)lsimeB413
MELO3C004586Bottle gourd (USVL1VR-Ls)lsimeB442
MELO3C004586Cucumber (Gy14) v2cgybmeB063
MELO3C004586Cucumber (Gy14) v2cgybmeB121
MELO3C004586Cucumber (Gy14) v2cgybmeB199