CU147918 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU147918
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionABC transporter I family member 19
LocationChr7 : 13121703 .. 13121974 (-)
Sequence length273
The following sequences are available for this feature:

transcribed_cluster sequence

ACTTGGCTGCGCGCTGAAACCAAACTTGAGAAGAAGAAGAAGCTACCAATTCAACCTCCATCCAACAATCAGAAGATTGTTTCTCCTTTCGGTTCGTCTCCTTTCATGTCTTCCAGACATATGGCTTATTATCGTTAGCTTTCGATTTAGTAGTATTATTTTGGGCATAGAATCTAAGAACTGTATTATGATTGACTCTACTTTACCATTGTTTTAGATCGAAATTGATCTAAATTATAATGGTAAAAGTAAGAAAAAGTGAGGTTGATAACG
Library categoryESTs
gynoecious flower library1
BLAST of CU147918 vs. Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.4e-06
Identity = 27/45 (60.00%), Postives = 29/45 (64.44%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+E KL KKKK P+ P        SPF +SPF SSRHMAYYR
Sbjct: 251 SWLRSEIKLVKKKKKPVAPWKP-----SPFDNSPFRSSRHMAYYR 290

Query: 61  120
           
Sbjct: 311 290

Query: 121 136
           
Sbjct: 371 290

BLAST of CU147918 vs. TrEMBL
Match: L7Y071_CUCSA (ABC transporter I family member 19 OS=Cucumis sativus GN=ABCA19 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR
Sbjct: 262 TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 306

Query: 61  120
           
Sbjct: 322 306

Query: 121 136
           
Sbjct: 382 306

BLAST of CU147918 vs. TrEMBL
Match: B9H8P6_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0005s24830g PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.9e-09
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+ETK EKKK  P  PP+ NQK  SPFGSSPFMSSRHMAYYR
Sbjct: 233 SWLRSETKNEKKK--PTNPPAQNQK-TSPFGSSPFMSSRHMAYYR 274

Query: 61  120
           
Sbjct: 293 274

Query: 121 136
           
Sbjct: 353 274

BLAST of CU147918 vs. TrEMBL
Match: V4T9R0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021439mg PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-08
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+ETKLEKK+  P+ PP   QK  SPFGSSPFMSSRHMAYYR
Sbjct: 253 SWLRSETKLEKKR--PVDPPKQVQK-TSPFGSSPFMSSRHMAYYR 294

Query: 61  120
           
Sbjct: 313 294

Query: 121 136
           
Sbjct: 373 294

BLAST of CU147918 vs. TrEMBL
Match: A0A097P9U8_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCI19 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-08
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+ET+ EKKK  P  PP+ NQK  SPFG+SPFMSSRHMAYYR
Sbjct: 259 SWLRSETRHEKKK--PTNPPAQNQK-TSPFGTSPFMSSRHMAYYR 300

Query: 61  120
           
Sbjct: 319 300

Query: 121 136
           
Sbjct: 379 300

BLAST of CU147918 vs. TrEMBL
Match: B9GRP1_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0002s03760g PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-08
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR ETK EKKK  P  PP+ NQK  SP GSSPFMSSRHMAYYR
Sbjct: 233 SWLRHETKSEKKK--PTNPPAQNQK-TSPLGSSPFMSSRHMAYYR 274

Query: 61  120
           
Sbjct: 293 274

Query: 121 136
           
Sbjct: 353 274

BLAST of CU147918 vs. NCBI nr
Match: gi|525507322|ref|NP_001267701.1| (ABC transporter I family member 19-like [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.9e-17
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR
Sbjct: 262 TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 306

Query: 61  120
           
Sbjct: 322 306

Query: 121 136
           
Sbjct: 382 306

BLAST of CU147918 vs. NCBI nr
Match: gi|659116500|ref|XP_008458101.1| (PREDICTED: ABC transporter I family member 19-like isoform X1 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 2.4e-14
Identity = 43/46 (93.48%), Postives = 43/46 (93.48%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKL-PIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           TWLRAETKLEKKKK  PIQPPSNNQKIVSPFGSSPF SSRHMAYYR
Sbjct: 262 TWLRAETKLEKKKKKQPIQPPSNNQKIVSPFGSSPFTSSRHMAYYR 307

Query: 61  120
           
Sbjct: 322 307

Query: 121 136
           
Sbjct: 382 307

BLAST of CU147918 vs. NCBI nr
Match: gi|224082840|ref|XP_002306861.1| (ABC transporter family protein [Populus trichocarpa])

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-08
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+ETK EKKK  P  PP+ NQK  SPFGSSPFMSSRHMAYYR
Sbjct: 233 SWLRSETKNEKKK--PTNPPAQNQK-TSPFGSSPFMSSRHMAYYR 274

Query: 61  120
           
Sbjct: 293 274

Query: 121 136
           
Sbjct: 353 274

BLAST of CU147918 vs. NCBI nr
Match: gi|567902640|ref|XP_006443808.1| (hypothetical protein CICLE_v10021439mg [Citrus clementina])

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-08
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+ETKLEKK+  P+ PP   QK  SPFGSSPFMSSRHMAYYR
Sbjct: 253 SWLRSETKLEKKR--PVDPPKQVQK-TSPFGSSPFMSSRHMAYYR 294

Query: 61  120
           
Sbjct: 313 294

Query: 121 136
           
Sbjct: 373 294

BLAST of CU147918 vs. NCBI nr
Match: gi|743919987|ref|XP_011004029.1| (PREDICTED: ABC transporter I family member 19-like [Populus euphratica])

HSP 1 Score: 65.5 bits (158), Expect = 5.6e-08
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 1

Query: 1   TWLRAETKLEKKKKLPIQPPSNNQKIVSPFGSSPFMSSRHMAYYR 60
           +WLR+ETK EKKK  P  PP+ NQK  SPFGSSPFMSSRHMA+YR
Sbjct: 257 SWLRSETKNEKKK--PANPPAQNQK-TSPFGSSPFMSSRHMAFYR 298

Query: 61  120
           
Sbjct: 317 298

Query: 121 136
           
Sbjct: 377 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AB19I_ARATH1.4e-0660.00ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
L7Y071_CUCSA1.6e-17100.00ABC transporter I family member 19 OS=Cucumis sativus GN=ABCA19 PE=2 SV=1[more]
B9H8P6_POPTR7.9e-0975.56ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0005s24830g PE=4 ... [more]
V4T9R0_9ROSI1.3e-0873.33Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021439mg PE=4 SV=1[more]
A0A097P9U8_HEVBR3.9e-0871.11ABC transporter family protein OS=Hevea brasiliensis GN=ABCI19 PE=2 SV=1[more]
B9GRP1_POPTR6.7e-0873.33ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0002s03760g PE=4 ... [more]
Match NameE-valueIdentityDescription
gi|525507322|ref|NP_001267701.1|3.9e-17100.00ABC transporter I family member 19-like [Cucumis sativus][more]
gi|659116500|ref|XP_008458101.1|2.4e-1493.48PREDICTED: ABC transporter I family member 19-like isoform X1 [Cucumis melo][more]
gi|224082840|ref|XP_002306861.1|1.9e-0875.56ABC transporter family protein [Populus trichocarpa][more]
gi|567902640|ref|XP_006443808.1|3.3e-0873.33hypothetical protein CICLE_v10021439mg [Citrus clementina][more]
gi|743919987|ref|XP_011004029.1|5.6e-0873.33PREDICTED: ABC transporter I family member 19-like [Populus euphratica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G368750Csa7G368750gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0152983G0152983EST