CU148487 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU148487
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 15863702 .. 15865342 (+)
Sequence length274
The following sequences are available for this feature:

transcribed_cluster sequence

TTAGTTCCAGAGCCATTTGTCTTGTATTTCTTGAGATTTCGCTCCCGTTCCTTCTGTTCAGATCAGTTACACTACTTTTTTAAAAGTTGCTTTCTCAGGTTTCCATACGCTTCCATCTTTATTTTGAATCTTCCGCAGTTGTTGGAACTAGCATTAGTTTTCGAGGCCGTCCTCTCTTTCTTTTGTAACTGTTTTTACTAGCTTGTTGCTGCTCAATTTCCTGCATGATTTTACGAGGCCTTCCCCGCTTTCGTCTATCACTGTTTTCAGTAGC
Library categoryESTs
gynoecious flower library1
BLAST of CU148487 vs. TrEMBL
Match: A0A0A0K5U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412860 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-25
Identity = 69/84 (82.14%), Postives = 69/84 (82.14%), Query Frame = -1

Query: 32  ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSK*R---WKRM 91
           ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDS      WK  
Sbjct: 425 ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSNKDGSVWKP- 484

Query: 92  ET*ESNF*KSSVTDLNRRNGSEIS 151
              E    KSSVTDLNRRNGSEIS
Sbjct: 485 ---EKATLKSSVTDLNRRNGSEIS 504

Query: 152 211
           
Sbjct: 545 504

Query: 212 271
           
Sbjct: 605 504

Query: 272 275
           
Sbjct: 665 504

BLAST of CU148487 vs. TrEMBL
Match: A0A0A0K5U9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412860 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-08
Identity = 46/105 (43.81%), Postives = 56/105 (53.33%), Query Frame = -1

Query: 32  NSDRRKRGRPRKIMQEIEQQQASK------------------------NSYKRKRGRPRK 91
           + +   + + ++   E +QQ+A++                        NSYKRKRGRPRK
Sbjct: 404 DGEENSKNQTKEKGMEPQQQEATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRK 463

Query: 92  LMLVPTTAEDSK*R---WKRMET*ESNF*KSSVTDLNRRNGSEIS 151
           LMLVPTTAEDS      WK     E    KSSVTDLNRRNGSEIS
Sbjct: 464 LMLVPTTAEDSNKDGSVWKP----EKATLKSSVTDLNRRNGSEIS 504

Query: 152 211
           
Sbjct: 524 504

Query: 212 266
           
Sbjct: 584 504

BLAST of CU148487 vs. NCBI nr
Match: gi|778728305|ref|XP_011659404.1| (PREDICTED: uncharacterized protein LOC101218122 isoform X2 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 6.2e-23
Identity = 69/84 (82.14%), Postives = 69/84 (82.14%), Query Frame = -1

Query: 32  ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSK*R---WKRM 91
           ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDS      WK  
Sbjct: 425 ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSNKDGSVWKP- 484

Query: 92  ET*ESNF*KSSVTDLNRRNGSEIS 151
              E    KSSVTDLNRRNGSEIS
Sbjct: 485 ---EKATLKSSVTDLNRRNGSEIS 504

Query: 152 211
           
Sbjct: 545 504

Query: 212 271
           
Sbjct: 605 504

Query: 272 275
           
Sbjct: 665 504

BLAST of CU148487 vs. NCBI nr
Match: gi|659101137|ref|XP_008451446.1| (PREDICTED: uncharacterized protein LOC103492739 isoform X2 [Cucumis melo])

HSP 1 Score: 112.8 bits (281), Expect = 3.1e-22
Identity = 68/84 (80.95%), Postives = 68/84 (80.95%), Query Frame = -1

Query: 32  ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSK---*RWKRM 91
           ATENSDRRKRGRPRKI QEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDS      WK  
Sbjct: 425 ATENSDRRKRGRPRKITQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSNQDGSLWKP- 484

Query: 92  ET*ESNF*KSSVTDLNRRNGSEIS 151
              E    KSSVTDLNRRNGSEIS
Sbjct: 485 ---EKATLKSSVTDLNRRNGSEIS 504

Query: 152 211
           
Sbjct: 545 504

Query: 212 271
           
Sbjct: 605 504

Query: 272 275
           
Sbjct: 665 504

BLAST of CU148487 vs. NCBI nr
Match: gi|778728302|ref|XP_011659403.1| (PREDICTED: uncharacterized protein LOC101218122 isoform X1 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 3.2e-19
Identity = 69/105 (65.71%), Postives = 69/105 (65.71%), Query Frame = -1

Query: 32  ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSK*R---WKRM 91
           ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDS      WK  
Sbjct: 425 ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSNKDGSVWKP- 484

Query: 92  ET*ESNF*KSSVT---------------------DLNRRNGSEIS 151
              E    KSSVT                     DLNRRNGSEIS
Sbjct: 485 ---EKATLKSSVTAKRTKRKKGFRIMPICFVDFQDLNRRNGSEIS 525

Query: 152 211
           
Sbjct: 545 525

Query: 212 271
           
Sbjct: 605 525

Query: 272 275
           
Sbjct: 665 525

BLAST of CU148487 vs. NCBI nr
Match: gi|659101135|ref|XP_008451445.1| (PREDICTED: uncharacterized protein LOC103492739 isoform X1 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18
Identity = 68/105 (64.76%), Postives = 68/105 (64.76%), Query Frame = -1

Query: 32  ATENSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSK---*RWKRM 91
           ATENSDRRKRGRPRKI QEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDS      WK  
Sbjct: 425 ATENSDRRKRGRPRKITQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSNQDGSLWKP- 484

Query: 92  ET*ESNF*KSSVT---------------------DLNRRNGSEIS 151
              E    KSSVT                     DLNRRNGSEIS
Sbjct: 485 ---EKATLKSSVTAKRTKRKKGFRKMPMYFVDFQDLNRRNGSEIS 525

Query: 152 211
           
Sbjct: 545 525

Query: 212 271
           
Sbjct: 605 525

Query: 272 275
           
Sbjct: 665 525

BLAST of CU148487 vs. NCBI nr
Match: gi|778728309|ref|XP_011659405.1| (PREDICTED: uncharacterized protein LOC101218122 isoform X3 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 8.7e-09
Identity = 51/102 (50.00%), Postives = 57/102 (55.88%), Query Frame = -1

Query: 32  NSDRRKRGRPRKIMQEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSK*R---WKRMET* 91
           + +   + + ++   EIEQQQASKNSYKRKRGRPRKLMLVPTTAEDS      WK     
Sbjct: 404 DGEENSKNQTKEKGMEIEQQQASKNSYKRKRGRPRKLMLVPTTAEDSNKDGSVWKP---- 463

Query: 92  ESNF*KSSVT---------------------DLNRRNGSEIS 151
           E    KSSVT                     DLNRRNGSEIS
Sbjct: 464 EKATLKSSVTAKRTKRKKGFRIMPICFVDFQDLNRRNGSEIS 501

Query: 152 211
           
Sbjct: 524 501

Query: 212 266
           
Sbjct: 584 501

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K5U9_CUCSA3.5e-2582.14Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412860 PE=4 SV=1[more]
A0A0A0K5U9_CUCSA2.3e-0843.81Uncharacterized protein OS=Cucumis sativus GN=Csa_7G412860 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778728305|ref|XP_011659404.1|6.2e-2382.14PREDICTED: uncharacterized protein LOC101218122 isoform X2 [Cucumis sativus][more]
gi|659101137|ref|XP_008451446.1|3.1e-2280.95PREDICTED: uncharacterized protein LOC103492739 isoform X2 [Cucumis melo][more]
gi|778728302|ref|XP_011659403.1|3.2e-1965.71PREDICTED: uncharacterized protein LOC101218122 isoform X1 [Cucumis sativus][more]
gi|659101135|ref|XP_008451445.1|1.6e-1864.76PREDICTED: uncharacterized protein LOC103492739 isoform X1 [Cucumis melo][more]
gi|778728309|ref|XP_011659405.1|8.7e-0950.00PREDICTED: uncharacterized protein LOC101218122 isoform X3 [Cucumis sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR017956AT_hook_DNA-bd_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G412860Csa7G412860gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0158064G0158064EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017956AT hook, DNA-binding motifSMARTSM00384AT_hook_2coord: 7..19
score: 1.0coord: 31..43
score: