CU149724 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU149724
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 20414176 .. 20414337 (-)
Sequence length167
The following sequences are available for this feature:

transcribed_cluster sequence

TAGTGGAAACTTTAGTAAGGGCCCAACAGATTGTCTAGTAAGTAGGTAACCGGTTGACAGAATGCGTCAGTGTAGAGAAGGAGGCAGACAAGGAACCAGAGACTGATATTCCAAAAGAACCTGCTGAACTACCAAAGAAAGAAGCTCCGGCAATTGAGGTAGTTCCA
Library categoryESTs
gynoecious flower library1
BLAST of CU149724 vs. TrEMBL
Match: A0A0A0LW81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560760 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.7e-12
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 3

Query: 54  LTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 113
           +TECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP
Sbjct: 265 VTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 302

Query: 114 168
           
Sbjct: 325 302

BLAST of CU149724 vs. NCBI nr
Match: gi|778662174|ref|XP_004135572.2| (PREDICTED: nestin-like isoform X2 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-10
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 3

Query: 54  LTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 113
           +TECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP
Sbjct: 265 VTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 302

Query: 114 168
           
Sbjct: 325 302

BLAST of CU149724 vs. NCBI nr
Match: gi|700210897|gb|KGN65993.1| (hypothetical protein Csa_1G560760 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-10
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 3

Query: 54  LTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 113
           +TECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP
Sbjct: 265 VTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 302

Query: 114 168
           
Sbjct: 325 302

BLAST of CU149724 vs. NCBI nr
Match: gi|778662171|ref|XP_011659466.1| (PREDICTED: nestin-like isoform X1 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 2.1e-10
Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 3

Query: 54  LTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 113
           +TECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP
Sbjct: 272 VTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 309

Query: 114 168
           
Sbjct: 332 309

BLAST of CU149724 vs. NCBI nr
Match: gi|659099260|ref|XP_008450510.1| (PREDICTED: titin-like isoform X2 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-07
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3

Query: 54  LTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 113
           +TECVSVEKEADK+PETDIPKEP EL KKEA A EVVP
Sbjct: 309 VTECVSVEKEADKKPETDIPKEPVELSKKEAQATEVVP 346

Query: 114 168
           
Sbjct: 369 346

BLAST of CU149724 vs. NCBI nr
Match: gi|659099258|ref|XP_008450509.1| (PREDICTED: titin-like isoform X1 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-07
Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 3

Query: 54  LTECVSVEKEADKEPETDIPKEPAELPKKEAPAIEVVP 113
           +TECVSVEKEADK+PETDIPKEP EL KKEA A EVVP
Sbjct: 316 VTECVSVEKEADKKPETDIPKEPVELSKKEAQATEVVP 353

Query: 114 168
           
Sbjct: 376 353

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LW81_CUCSA2.7e-1297.37Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778662174|ref|XP_004135572.2|2.1e-1097.37PREDICTED: nestin-like isoform X2 [Cucumis sativus][more]
gi|700210897|gb|KGN65993.1|2.1e-1097.37hypothetical protein Csa_1G560760 [Cucumis sativus][more]
gi|778662171|ref|XP_011659466.1|2.1e-1097.37PREDICTED: nestin-like isoform X1 [Cucumis sativus][more]
gi|659099260|ref|XP_008450510.1|4.9e-0784.21PREDICTED: titin-like isoform X2 [Cucumis melo][more]
gi|659099258|ref|XP_008450509.1|4.9e-0784.21PREDICTED: titin-like isoform X1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G560760Csa1G560760gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0169522G0169522EST