CU151977 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU151977
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 8470724 .. 8470853 (-)
Sequence length129
The following sequences are available for this feature:

transcribed_cluster sequence

GGGGAATCTTCGGAGAAAAAGACGAGAAGAAGACCCATTCCCCAATTGTCACCGGCAGTGGATTTGGATTTTCCGGTGAGAGTGAGACCCATTCGTTTTTAGTTGTTCAATGGGGGATTTGGGATTGGC
Library categoryESTs
gynoecious flower library1
BLAST of CU151977 vs. TrEMBL
Match: A0A0A0KWA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G162850 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.0e-08
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -2

Query: 3  MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS 62
          MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS
Sbjct: 1  MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS 30

Query: 63 93
          
Sbjct: 61 30

BLAST of CU151977 vs. NCBI nr
Match: gi|449466873|ref|XP_004151150.1| (PREDICTED: uncharacterized protein LOC101208268 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-08
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -2

Query: 3  MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS 62
          MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS
Sbjct: 1  MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS 30

Query: 63 93
          
Sbjct: 61 30

BLAST of CU151977 vs. NCBI nr
Match: gi|659121692|ref|XP_008460778.1| (PREDICTED: uncharacterized protein LOC103499540 [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-07
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = -2

Query: 3  MGLTLTGKSKSTAGDNWGMGLLLVFFSEDS 62
          MGLTLTGKSKSTAG+NWGMGLLLVFFSEDS
Sbjct: 1  MGLTLTGKSKSTAGENWGMGLLLVFFSEDS 30

Query: 63 93
          
Sbjct: 61 30

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KWA6_CUCSA4.0e-08100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G162850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449466873|ref|XP_004151150.1|4.4e-08100.00PREDICTED: uncharacterized protein LOC101208268 [Cucumis sativus][more]
gi|659121692|ref|XP_008460778.1|1.3e-0796.67PREDICTED: uncharacterized protein LOC103499540 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G162850Csa4G162850gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0188294G0188294EST