WMU54984 (transcribed_cluster) Watermelon (97103) v1

NameWMU54984
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr7 : 13374891 .. 13402640 (-)
Sequence length330
The following sequences are available for this feature:

transcribed_cluster sequence

AGAATGCGTGCTGGGCTTGCAGCATCTGCCATCGCCTTAGTTAAAGTTGCAATTCCACTCATTCTCTGCATAAAGTTCAGTGCCACCTTTCAGCTACAAGGATGCTTTTGTGCTTGCCCAAAGTCAGCAGAATCTTCTGCAAGGGCTAACTGGATGATGCCACACAGATCATAGGTAGGGTGAGATGGAGGCTGGATTGCTACTGATGCAACTGATATCCCAGAATCTTTGGATACAGATGTAGACATTGCAATAATTTTCCTGGAACCTAAGCCGTGAGCAGTAGAGATTGGAATGTGTGTTAACCCTCTAGAACAGCCACGCAATCCT
BLAST of WMU54984 vs. TAIR10
Match: AT2G01350.1 (AT2G01350.1 quinolinate phoshoribosyltransferase)

HSP 1 Score: 51.6 bits (122), Expect = 3.5e-07
Identity = 28/39 (71.79%), Postives = 29/39 (74.36%), Query Frame = -2

Query: 3   GQAQKHPCS*KVALNFMQRMSGIATLTKAMADAASPARI 62
           G A K   + +V LNFMQRMSGIATLTK MADAASPA I
Sbjct: 129 GNAHKIVVAERVLLNFMQRMSGIATLTKLMADAASPACI 167

Query: 63  120
           
Sbjct: 189 167


HSP 2 Score: 48.5 bits (114), Expect = 3.0e-06
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = -2

Query: 117 RKIIAMSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQLALAEDSADFG 176
           R  + MS S ++ +G    S+ I+PPSHPTYDL  +I+LALAED+   G
Sbjct: 17  RSFVKMSASATQTAG--EVSMGIKPPSHPTYDLKAVIKLALAEDAGHTG 63

Query: 177 236
           
Sbjct: 77  63

Query: 237 264
           
Sbjct: 137 63

BLAST of WMU54984 vs. Swiss-Prot
Match: NADC_ARATH (Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Arabidopsis thaliana GN=QPT PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 6.3e-06
Identity = 28/39 (71.79%), Postives = 29/39 (74.36%), Query Frame = -2

Query: 3   GQAQKHPCS*KVALNFMQRMSGIATLTKAMADAASPARI 62
           G A K   + +V LNFMQRMSGIATLTK MADAASPA I
Sbjct: 129 GNAHKIVVAERVLLNFMQRMSGIATLTKLMADAASPACI 167

Query: 63  120
           
Sbjct: 189 167


HSP 2 Score: 48.5 bits (114), Expect = 5.3e-05
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = -2

Query: 117 RKIIAMSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQLALAEDSADFG 176
           R  + MS S ++ +G    S+ I+PPSHPTYDL  +I+LALAED+   G
Sbjct: 17  RSFVKMSASATQTAG--EVSMGIKPPSHPTYDLKAVIKLALAEDAGHTG 63

Query: 177 236
           
Sbjct: 77  63

Query: 237 264
           
Sbjct: 137 63

BLAST of WMU54984 vs. NCBI nr
Match: gi|659109569|ref|XP_008454775.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-24
Identity = 63/70 (90.00%), Postives = 64/70 (91.43%), Query Frame = -2

Query: 117 LRGCSRGLTHIPISTAHGLGSRKIIAMSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQL 176
           L GCSRGLTHIPISTA  LGSRKIIAMS SVS DSGISVASVAIQPPSHPTYDL GII+L
Sbjct: 23  LWGCSRGLTHIPISTARCLGSRKIIAMSASVSNDSGISVASVAIQPPSHPTYDLRGIIKL 82

Query: 177 ALAEDSADFG 236
           ALAEDSADFG
Sbjct: 83  ALAEDSADFG 92

Query: 237 296
           
Sbjct: 143 92

Query: 297 327
           
Sbjct: 203 92

BLAST of WMU54984 vs. NCBI nr
Match: gi|659109573|ref|XP_008454777.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-24
Identity = 62/71 (87.32%), Postives = 64/71 (90.14%), Query Frame = -2

Query: 114 LRGCSRGLTHIPISTAHGLGSRKIIAMSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQL 173
           L GCSRGLTHIPISTA  LGSRKIIAMS SVS DSGISVASVAIQPPSHPTYDL GII+L
Sbjct: 23  LWGCSRGLTHIPISTARCLGSRKIIAMSASVSNDSGISVASVAIQPPSHPTYDLRGIIKL 82

Query: 174 ALAEDSADFGQ 233
           ALAEDSADF +
Sbjct: 83  ALAEDSADFAK 93

Query: 234 293
           
Sbjct: 143 93

Query: 294 327
           
Sbjct: 203 93

BLAST of WMU54984 vs. NCBI nr
Match: gi|778730689|ref|XP_011659842.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 112.8 bits (281), Expect = 3.7e-22
Identity = 61/70 (87.14%), Postives = 62/70 (88.57%), Query Frame = -2

Query: 117 LRGCSRGLTHIPISTAHGLGSRKIIAMSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQL 176
           L G SRGLT IPISTA  LGSRKIIAMS SVSKDSGISVAS AIQPPSHPTYDL GII+L
Sbjct: 23  LCGYSRGLTRIPISTARCLGSRKIIAMSASVSKDSGISVASAAIQPPSHPTYDLRGIIKL 82

Query: 177 ALAEDSADFG 236
           ALAEDSADFG
Sbjct: 83  ALAEDSADFG 92

Query: 237 296
           
Sbjct: 143 92

Query: 297 327
           
Sbjct: 203 92

BLAST of WMU54984 vs. NCBI nr
Match: gi|659109575|ref|XP_008454778.1| (PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating])

HSP 1 Score: 78.6 bits (192), Expect = 7.7e-12
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = -2

Query: 117 MSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQLALAEDSADFG 176
           MS SVS DSGISVASVAIQPPSHPTYDL GII+LALAEDSADFG
Sbjct: 1   MSASVSNDSGISVASVAIQPPSHPTYDLRGIIKLALAEDSADFG 44

Query: 177 236
           
Sbjct: 61  44

Query: 237 249
           
Sbjct: 121 44

BLAST of WMU54984 vs. NCBI nr
Match: gi|661896179|emb|CDP00757.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07
Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = -2

Query: 51  RKIIAMSTSVSKDSGISVASVAIQPPSHPTYDLCGIIQLALAEDSADFGQA---QKHPCS 110
           R ++ MS   +K++GI+ AS+ ++PP+HPTYDL G+IQLAL+ED+ D G        P  
Sbjct: 20  RYVVKMSAIATKNTGIAAASLGVKPPAHPTYDLKGVIQLALSEDAGDLGDVTCKATIPVD 79

Query: 111 *KVALNFMQRMSGI 170
            +V  +F+ +  GI
Sbjct: 80  MEVEAHFLAKEDGI 93

Query: 171 230
           
Sbjct: 140 93

Query: 231 264
           
Sbjct: 200 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G01350.13.5e-0771.79 quinolinate phoshoribosyltransferase[more]
Match NameE-valueIdentityDescription
NADC_ARATH6.3e-0671.79Nicotinate-nucleotide pyrophosphorylase [carboxylating], chloroplastic OS=Arabid... [more]
Match NameE-valueIdentityDescription
gi|659109569|ref|XP_008454775.1|3.0e-2490.00PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating][more]
gi|659109573|ref|XP_008454777.1|8.7e-2487.32PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating][more]
gi|778730689|ref|XP_011659842.1|3.7e-2287.14PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating][more]
gi|659109575|ref|XP_008454778.1|7.7e-1290.91PREDICTED: nicotinate-nucleotide pyrophosphorylase [carboxylating][more]
gi|661896179|emb|CDP00757.1|1.5e-0741.89unnamed protein product [Coffea canephora][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla001944Cla001944gene
Cla001945Cla001945gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0109405S1_0109405EST