MELO3C023193T2 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCTTTCCATTTTGTTTTTCATGTTTAGGCTGAATGTTTCCTTCACAAGATCGCCAATAAAAGGTGATATCGTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCATGACATGAAAGAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTGAGTTCGCATTCCTTCTAGTTCTTTATTAGATCATCGAGACGCCTCCTCTATCTTATTTTTCTTTTTGTTCTTTTCCCCTTTAAATTTCGCCTTAACTACCTTTTTGGATTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATATCCTTTAATGTCGAGAGGGTTTGTCAGGCACACTATGTTGGAAATTGTGTCAAATTTCATTAATGCACGCACCCGTAAAACTCAACTCTAAATTAATGAAAGTTTTATCTTTGAATCTTTTGCATCTGTACCCCACCCCCCACCATTGCATTACTGGTATATTGACTTATGGAATCTGCAATCAAACCTTTTCATTATACGAGATACATGGTTTCCTACGATTCAGGCATTCTAAATACATTTGAGAGATTAATTTCAGTTCGTAGTTCATATTGTTCCCTTCTTTTACCAATATTCTGATTTTCCTTTGACTATTCACTACATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTGGACATTTTTTCTTCTGTATCACTATTGTTATTGCTTGTGGTGCTTAGTGTGTGTATGTGTGTGTGTTTTTCAACAACACGCGGGGGAGTGTTGTGCTTAATTTTTCTATGTTATGTATATTATATTGGTTGATTGAAGTATATCTTAGTTGATTAAGTTACTTTTCCAAAGCTGGGAGGCATACTTTGATTCGGTCAGACATGAGTGGCATTCCCTTTTACTTATTTTCTTCGTTTAGAACCTGGTGGACATTGAAAAACTGATGTGTAACTTCCTTTGGGAAGAGGTGGAAGAAGGAAACAGACTGCAACGAGTTAGATGGGAGATCGATGAACTGGGGGAATTAAAATTTGTTATGAAAGCCCTATTAGCTAAATGGCTTTCGCATTTTGCTCTTGATTCTATTACCTTTTTGCACAAGGATATTGCTTGCAAGTTTGGGCCTCATCCCTTTGAGTGGTTGTCAGGTGGGATTAAAGGCATCGACTAGAATTTGTGGAAGGATATTTCTAACAAGCTGCCCTCTTTCTACCATTCTGTCTGTTGTG AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTGGACATTTTTTCTTCTGTATCACTATTGTTATTGCTTGTGGTGCTTAGTGTGTGTATGTGTGTGTGTTTTTCAACAACACGCGGGGGAGTGTTGTGCTTAATTTTTCTATGTTATGTATATTATATTGGTTGATTGAAGTATATCTTAGTTGATTAAGTTACTTTTCCAAAGCTGGGAGGCATACTTTGATTCGGTCAGACATGAGTGGCATTCCCTTTTACTTATTTTCTTCGTTTAGAACCTGGTGGACATTGAAAAACTGATGTGTAACTTCCTTTGGGAAGAGGTGGAAGAAGGAAACAGACTGCAACGAGTTAGATGGGAGATCGATGAACTGGGGGAATTAAAATTTGTTATGAAAGCCCTATTAGCTAAATGGCTTTCGCATTTTGCTCTTGATTCTATTACCTTTTTGCACAAGGATATTGCTTGCAAGTTTGGGCCTCATCCCTTTGAGTGGTTGTCAGGTGGGATTAAAGGCATCGACTAGAATTTGTGGAAGGATATTTCTAACAAGCTGCCCTCTTTCTACCATTCTGTCTGTTGTG ATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTGGACATTTTTTCTTCTGTATCACTATTGTTATTGCTTGTGGTGCTTAGTGTGTGTATGTGTGTGTGTTTTTCAACAACACGCGGGGGAGTGTTGTGCTTAA MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKVSWTFFLLYHYCYCLWCLVCVCVCVFQQHAGECCA*
BLAST of MELO3C023193T2 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-23 Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of MELO3C023193T2 vs. Swiss-Prot
Match: TPPC2_PONAB (Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-23 Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of MELO3C023193T2 vs. Swiss-Prot
Match: TPC2A_HUMAN (Trafficking protein particle complex subunit 2 OS=Homo sapiens GN=TRAPPC2 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-23 Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of MELO3C023193T2 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2) HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23 Identity = 51/114 (44.74%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of MELO3C023193T2 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23 Identity = 51/114 (44.74%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of MELO3C023193T2 vs. TrEMBL
Match: A0A067FL79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.2e-49 Identity = 99/106 (93.40%), Postives = 103/106 (97.17%), Query Frame = 1
BLAST of MELO3C023193T2 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.4e-49 Identity = 99/106 (93.40%), Postives = 103/106 (97.17%), Query Frame = 1
BLAST of MELO3C023193T2 vs. TrEMBL
Match: A0A061EID8_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 7.1e-49 Identity = 98/106 (92.45%), Postives = 103/106 (97.17%), Query Frame = 1
BLAST of MELO3C023193T2 vs. TrEMBL
Match: R0IGD2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021128mg PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 9.2e-49 Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 1
BLAST of MELO3C023193T2 vs. TrEMBL
Match: F4HTY0_ARATH (SNARE-like protein OS=Arabidopsis thaliana GN=At1g80500 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 9.2e-49 Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 1
BLAST of MELO3C023193T2 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein) HSP 1 Score: 201.1 bits (510), Expect = 4.7e-52 Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 1
BLAST of MELO3C023193T2 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 2.2e-51 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1
BLAST of MELO3C023193T2 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 1.1e-50 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 1
BLAST of MELO3C023193T2 vs. NCBI nr
Match: gi|743818138|ref|XP_011020593.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Populus euphratica]) HSP 1 Score: 206.5 bits (524), Expect = 3.2e-50 Identity = 102/125 (81.60%), Postives = 112/125 (89.60%), Query Frame = 1
BLAST of MELO3C023193T2 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus]) HSP 1 Score: 203.4 bits (516), Expect = 2.7e-49 Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 1
BLAST of MELO3C023193T2 vs. NCBI nr
Match: gi|641845077|gb|KDO63966.1| (hypothetical protein CISIN_1g032720mg [Citrus sinensis]) HSP 1 Score: 202.6 bits (514), Expect = 4.6e-49 Identity = 99/106 (93.40%), Postives = 103/106 (97.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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