MELO3C023193T3 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAGTATTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGCTTTCCATTTTGTTTTTCATGTTTAGGCTGAATGTTTCCTTCACAAGATCGCCAATAAAAGGTGATATCGTTAATTACTTTAGTTTTGACTGTCATTAGTCGCTCATCTTTTTGGCATGACATGAAAGAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTGAGTTCGCATTCCTTCTAGTTCTTTATTAGATCATCGAGACGCCTCCTCTATCTTATTTTTCTTTTTGTTCTTTTCCCCTTTAAATTTCGCCTTAACTACCTTTTTGGATTTTATGCAGGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATATCCTTTAATGTCGAGAGGGTTTGTCAGGCACACTATGTTGGAAATTGTGTCAAATTTCATTAATGCACGCACCCGTAAAACTCAACTCTAAATTAATGAAAGTTTTATCTTTGAATCTTTTGCATCTGTACCCCACCCCCCACCATTGCATTACTGGTATATTGACTTATGGAATCTGCAATCAAACCTTTTCATTATACGAGATACATGGTTTCCTACGATTCAGGCATTCTAAATACATTTGAGAGATTAATTTCAGTTCGTAGTTCATATTGTTCCCTTCTTTTACCAATATTCTGATTTTCCTTTGACTATTCACTACATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGGTAAGTTGGACATTTTTTCTTCTGTATCACTATTGTTATTGCTTGTGGTGCTTAGTGTGTGTATGTGTGTGTGTTTTTCAACAACACGCGGGGGAGTGTTGTGCTTAATTTTTCTATGTTATGTATATTATATTGGTTGATTGAAGTATATCTTAGTTGATTAAGTTACTTTTCCAAAGCTGGGAGGCATACTTTGATTCGGTCAGACATGAGTGGCATTCCCTTTTACTTATTTTCTTCGTTTAGAACCTGGTGGACATTGAAAAACTGATGTGTAACTTCCTTTGGGAAGAGGTGGAAGAAGGAAACAGACTGCAACGAGTTAGATGGGAGATCGATGAACTGGGGGAATTAAAATTTGTTATGAAAGCCCTATTAGCTAAATGGCTTTCGCATTTTGCTCTTGATTCTATTACCTTTTTGCACAAGGATATTGCTTGCAAGTTTGGGCCTCATCCCTTTGAGTGGTTGTCAGGTGGGATTAAAGGCATCGACTAGAATTTGTGGAAGGATATTTCTAACAAGCTGCCCTCTTTCTACCATTCTGTCTGTTGTGTGGTAGGGTAGAGGAGGGTGAGGAAGTATGATTCTGGGGTGATCAATGCTTGGGGATAGATAAACCTCTCTGCTTCCATTTCCTCATCTTTATCATTTATCCCTCTCTAGAAATCATTTTGTTTCTGGGTTTTTTGTTTGGTTGGGGAGCTTGGTTTCCTTTTTCTTCGGGTTTAACCGCTCTTTGACTGATAGGGAAGCTACAAATGTCATCTCTTTGCTGTCGTTGTTGGGGGAGTTTAACTTTAGATATGGGAGAAAGGATCTACTTGTCTGGAATCTCAATCCTCTTGAGGGATTCTTTTGTAATTCCAATTTTTTTTTTGTCTGGTGAATCCTTCTCCTTCCCATTAGTATGTCTTTTCAGCCCTTCAGAGGAATAAGATTCTTGAGAAGGATAGATTCTTTACCTGGCAAATTTTACATAAATGTGTGAACATTTTGGATAGGCTCTCGAGGAGGAAGAGGTTATTGTTGTTAGGGGGCCCTTTTTTGTATTATGTTGGAAGGTCGGTGAAAACTTGGATCACATACTTTGGAGAGTTGCACACTATGTCTAGAATTTGTTCTTCCAGAAATTTGGTCTTGTGGTTGCCCATCAAAAGGACTTCAGAGTTACGATCGGGTAGTTCCCTTCCTCCTCCATCCTCCTTTTGTGAGAAAGGTCATATGCCTTGTATTTTTTTTTTTTTTAATTCTATCTCAATGAAAGTGCTTGCAGTTGCATTATCTGAAAAAGAAGGAAAAAAAAAGGTTCTTGCTTAATGGAGTTATATATATATATATATGTAAAAACAGAACAGTTGTAAATAAGCAAATTGTATCACTCCAATATGAGCATAGATAAAAGGCATTAGTTATCATCTCAAAGGTCGATGATTTGATCTCACTTACAGTTGCTGAACTAAAAAAAAAAAGAAAAAGAAAAAAAGAAGAAGAAATAATAATAATAATAATAAATAAATAAATAAATTGCATTCCTCGAGTCCTGATTGTGTATATTCATCAAAAAGCGTAACGGGTTGATTTGTTACAAGATCAAGTTGTCATTGTGAATGAAACATGAGATGGTGGGTGGTGAGGTTGGTTTATCTTTTTGAGAGCCCTTGTTGTTTGGCCATGTCAGGTGCTCAGATTTAAGGCTCCTTTAGATCCCTCCTAAGTGTTATTATTGTTTCCGTAGCACTGGAATGTGACCTATATCTTCAAGGATAGTCCTTCAGACCTATTTCTTCTAGGAAAATTTAATTGGTTTTTGGAAATAAAATTGATAGATTGACTTGAAATCATGTGCTAGAGTTACAAAGTATTGTTATTATCTAGTAGTGGTACGTTTTTAATAAGTTATATTAATAACGATTGAGTTGTTGAATGAACTATTTGTAGAAAAACTATGTTTATGACATACCAAGATTGTTTCCCTCCGAAGTGTCCTTTAGTGTTATCCTTTGAATTGATTGCACCACATAGACAAAATGGCCTAGAATAAGCAATAACGATTTCATGGCTAAAAAAAAAAACGTAGCTCACCTAACATCTAACCCTGGGGTTCTAATCCCCCGAGTCCCTCTTGTACTCGAGTGTTAAATATTCATGTTAACTTGTCTCTCATCCTCTCCTGATTTTTATATCTATATTTTCTCTCTCTATTGGAGACTTTTTTCTTCCATTAGCCAATAAGACTTTTCCCGTCTAAGAAACCAATAAGCGTTTCTGTTTGAATAGAAGAAAAGTGGTGTAAACGGGAGTGTAATTCTTGTTCTGCTTACTTGTAACGGCTATCATAATAGTAGGTTCATGAGGGCCTCCCATCCCCAGCATTGTTTACGTTCTATTGGCAAAATTTCCCAATCAATGTAGGCTATTCTGCAACTGAAATTTAACTTTTCTTGATGATTCTAGTTTGATTTTACCCATTTGAAAACTTCTGTTACTACTCTCCTTGGTTGATTACTCTTTTGGATTTTAGCGCAGTTAGTATTCCTATCAAATTTTGCAAGTTTTCGTCAAGCTAGGATTTCAAGACCTTAAATTTCATTTTTCATGTTTGCCGTAACAGTAGATAAATAAAAGGTTTGGTACTTTGGTTTGATCACCTTCAGTCTACTCTCTAATTTTTGGAGCTTCATGGAAGATGCAACAGTGTTTTTGCAAAGATTTTGACTATAGTAAATAATTTTGAGGACTACTTGTCATATAATTTCATAATATTGTCCATTCCATTTGATAGGCAACGACAACAAGGGGCCTAAGCTCTGTATATAATGTTTCATAGTTAAGTATTTCCATGGATGTGATTTTTCGGCTTTGAATCAAACTTACTTGATACTCATCTATCGGAAGAATTATAAGTTAATCAATTCAAGACAATTAAACGCTGGGTAAGTCTTGGTTATTTGGTGGGCTTTGGTCTTCTATGTGTTCCCCCTGTTTTCAATGAATGGCTGTGGCATGAACCTTGTTGTGTTCCAGATATTTTTTCTGCATTGTTGCCCTGCACATGACTGAAATTGGCTTTGTGAATTTGCAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAGTCATCACCTTCATTGCAGACCAAATGTGCTTTCATGACAATGCTTCGAAGTTTATAGTAGCCCTAAGTTTTCTTTTAACTGTACAACATTTTAATCTTTGCCATTTGTGGTCCTGACATCAATCAATTCAGTAGTTAAATAATTCTCAATGTGTAATATTGACTTTGGAATGGCTTGGTTACGAGTTGGAATTGCACTTCACAGTAATGCGTTTTGCCCTTTTTACTCATCTTTTGTTGTAGAGAGTACTATCATTATTTGTTGTTATATTCTATAAGGCAGTGGATATGGGATATTAAAGTTGTGTAAAATATGCATTTTTTGAAAAGCTCAATAGACGGTCCATTCCTT AGAGACCTTCCGAATTGCTACTCAGAATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAGTCATCACCTTCATTGCAGACCAAATGTGCTTTCATGACAATGCTTCGAAGTTTATAGTAGCCCTAAGTTTTCTTTTAACTGTACAACATTTTAATCTTTGCCATTTGTGGTCCTGACATCAATCAATTCAGTAGTTAAATAATTCTCAATGTGTAATATTGACTTTGGAATGGCTTGGTTACGAGTTGGAATTGCACTTCACAGTAATGCGTTTTGCCCTTTTTACTCATCTTTTGTTGTAGAGAGTACTATCATTATTTGTTGTTATATTCTATAAGGCAGTGGATATGGGATATTAAAGTTGTGTAAAATATGCATTTTTTGAAAAGCTCAATAGACGGTCCATTCCTT ATGGCGAACACAGCTTGTTTCATCATCGTCAGTAGGAACAATATCCCAATTTATGAAGCTGAAGTCGGATCTGCTGTTAAAAGAGAGGATTCCGCCCAGCTGCATCAATTTATATTGCATGCGTCCCTTGACATTGTCCAAGACCTGGCATGGACTACTAGTGCCATGTTCTTGAAAGCAGTCGATAGGTTCAATGATTTGGTGGTGTCTGTCTATGTAACCGCTGGTCATACGCGATTGATGTTACTTCACGACTCTCGCAATGACGATGGAATCAAGAGTTTTTTTCAAGAGGTTCATGAGCTTTACATAAAGACTATACTCAATCCTCTCTACTTGCCTGGATCCCGCATCACGTCTTCACATTTTGACACAAAAGTTCGCGCACTCGCAAGGAAGTATCTCTAG MANTACFIIVSRNNIPIYEAEVGSAVKREDSAQLHQFILHASLDIVQDLAWTTSAMFLKAVDRFNDLVVSVYVTAGHTRLMLLHDSRNDDGIKSFFQEVHELYIKTILNPLYLPGSRITSSHFDTKVRALARKYL*
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_CANLF (Trafficking protein particle complex subunit 2 OS=Canis lupus familiaris GN=TRAPPC2 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_PIG (Trafficking protein particle complex subunit 2 OS=Sus scrofa GN=TRAPPC2 PE=2 SV=2) HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPPC2_MOUSE (Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.4e-31 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1
BLAST of MELO3C023193T3 vs. Swiss-Prot
Match: TPC2B_HUMAN (Trafficking protein particle complex subunit 2B OS=Homo sapiens GN=TRAPPC2B PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.4e-31 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TrEMBL
Match: M5XZB8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013209mg PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 6.1e-66 Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TrEMBL
Match: A0A067FL79_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032720mg PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.4e-65 Identity = 127/135 (94.07%), Postives = 131/135 (97.04%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TrEMBL
Match: A0A061EJF7_THECC (SNARE-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.3e-65 Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TrEMBL
Match: A0A061EID8_THECC (SNARE-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_019945 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 3.0e-65 Identity = 126/135 (93.33%), Postives = 131/135 (97.04%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TrEMBL
Match: F4HTY0_ARATH (SNARE-like protein OS=Arabidopsis thaliana GN=At1g80500 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 4.0e-65 Identity = 125/135 (92.59%), Postives = 132/135 (97.78%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TAIR10
Match: AT1G80500.1 (AT1G80500.1 SNARE-like superfamily protein) HSP 1 Score: 255.4 bits (651), Expect = 2.0e-68 Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 1
BLAST of MELO3C023193T3 vs. TAIR10
Match: AT2G20930.1 (AT2G20930.1 SNARE-like superfamily protein) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08 Identity = 37/138 (26.81%), Postives = 66/138 (47.83%), Query Frame = 1
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|659121801|ref|XP_008460820.1| (PREDICTED: trafficking protein particle complex subunit 2 [Cucumis melo]) HSP 1 Score: 268.9 bits (686), Expect = 5.0e-69 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|449459192|ref|XP_004147330.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X2 [Cucumis sativus]) HSP 1 Score: 266.2 bits (679), Expect = 3.2e-68 Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 1
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|778670342|ref|XP_011649448.1| (PREDICTED: transport protein particle 20 kDa subunit isoform X1 [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 8.0e-67 Identity = 133/136 (97.79%), Postives = 134/136 (98.53%), Query Frame = 1
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|596289200|ref|XP_007226059.1| (hypothetical protein PRUPE_ppa013209mg [Prunus persica]) HSP 1 Score: 258.1 bits (658), Expect = 8.8e-66 Identity = 126/135 (93.33%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of MELO3C023193T3 vs. NCBI nr
Match: gi|568882443|ref|XP_006494040.1| (PREDICTED: trafficking protein particle complex subunit 2 [Citrus sinensis]) HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65 Identity = 127/135 (94.07%), Postives = 132/135 (97.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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