Cla003671.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla003671
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Receptor protein kinase-like protein (AHRD V1 ***- Q9LJU5_ARATH); contains Interpro domain(s) IPR017442 Serine/threonine protein kinase-related
Location	Chr8 : 8319744 .. 8320380 (-)
Sequence length	459

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGGGGTAGTTTGGAAAACCACTTGTTTCGAAGTAAGAATTCCAATTCTATCCTTCAAGTTCGAATTTTCCACTCTACATATTTATAAACTAATAAGATATTACAATTTTGAAATTGGCAGAAGGCGTAGAACCCCTATCATGGGAAACACGAATTAAGATAGCTACAGGAGCAGCATGTGGTTTGACGTTTCTTCACACGTCGGAGAAGAGTGTGATTTACCGTGATTTCAAAGCTTCGAATATTCTTCTGGATGGGGTAATAATAAATTATTTGCTAAGTACATTCATAGATTTGTGTAATGAATTTGATTACTGATTGTTTTAAATGATTAAATGTGAAATCAGAATTTTAACCCAAAGTTGTCAGATTTTGGGCTTGCGAAACTGGGCCCAGCCAATGGTAACTCCCATGTCAGCACAAATCCAGTTGGCACCTACGGCTATGCTGCCCCTGAGTACATTGCAACTGGTGATATAACCTTCCTCCCTCTTTCCTTTCATAAATCATTTTTTGTCGGTCATCGTTTTTTTTTTCTTTTCTTCTTTTTTTTTAATGTCAAAATTCATTTGTTTATATATAGGAAAAAAGGAATTGAAATGAATGAGATTTATATAATCTATTCCAAGTAG

mRNA sequence

ATGCAAAGGGGTAGTTTGGAAAACCACTTGTTTCGAAAAGGCGTAGAACCCCTATCATGGGAAACACGAATTAAGATAGCTACAGGAGCAGCATGTGGTTTGACGTTTCTTCACACGTCGGAGAAGAGTGTGATTTACCGTGATTTCAAAGCTTCGAATATTCTTCTGGATGGGAATTTTAACCCAAAGTTGTCAGATTTTGGGCTTGCGAAACTGGGCCCAGCCAATGGTAACTCCCATGTCAGCACAAATCCAGTTGGCACCTACGGCTATGCTGCCCCTGAGTACATTGCAACTGGTGATATAACCTTCCTCCCTCTTTCCTTTCATAAATCATTTTTTGTCGGTCATCGTTTTTTTTTTCTTTTCTTCTTTTTTTTTAATGTCAAAATTCATTTGTTTATATATAGGAAAAAAGGAATTGAAATGAATGAGATTTATATAATCTATTCCAAGTAG

Coding sequence (CDS)

ATGCAAAGGGGTAGTTTGGAAAACCACTTGTTTCGAAAAGGCGTAGAACCCCTATCATGGGAAACACGAATTAAGATAGCTACAGGAGCAGCATGTGGTTTGACGTTTCTTCACACGTCGGAGAAGAGTGTGATTTACCGTGATTTCAAAGCTTCGAATATTCTTCTGGATGGGAATTTTAACCCAAAGTTGTCAGATTTTGGGCTTGCGAAACTGGGCCCAGCCAATGGTAACTCCCATGTCAGCACAAATCCAGTTGGCACCTACGGCTATGCTGCCCCTGAGTACATTGCAACTGGTGATATAACCTTCCTCCCTCTTTCCTTTCATAAATCATTTTTTGTCGGTCATCGTTTTTTTTTTCTTTTCTTCTTTTTTTTTAATGTCAAAATTCATTTGTTTATATATAGGAAAAAAGGAATTGAAATGAATGAGATTTATATAATCTATTCCAAGTAG

Protein sequence

MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNFNPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDITFLPLSFHKSFFVGHRFFFLFFFFFNVKIHLFIYRKKGIEMNEIYIIYSK

Homology

[Close]

BLAST of Cla003671 vs. Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-36
Identity = 70/103 (67.96%), Postives = 83/103 (80.58%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           M +GSLENHLFR+G +PL+W  R+K+A GAA GLTFLH ++  VIYRDFKA+NILLD +F
Sbjct: 172 MPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADF 231

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDIT 104
           N KLSDFGLAK GP   N+HVST  +GT+GYAAPEY+ATG +T
Sbjct: 232 NAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLT 274

[Close]

BLAST of Cla003671 vs. Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-35
Identity = 69/103 (66.99%), Postives = 81/103 (78.64%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           M +GSLENHLFR+G +PL+W  R+K+A GAA GLTFLH ++  VIYRDFKA+NILLD  F
Sbjct: 169 MPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEF 228

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDIT 104
           N KLSDFGLAK GP    +HVST  +GT+GYAAPEY+ATG +T
Sbjct: 229 NSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLT 271

[Close]

BLAST of Cla003671 vs. Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 9.0e-35
Identity = 73/105 (69.52%), Postives = 80/105 (76.19%), Query Frame = 1


Query: 1   MQRGSLENHLFRKG--VEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDG 60
           M RGSLENHLFR+G   +PLSW  R+K+A GAA GL FLH +E SVIYRDFK SNILLD 
Sbjct: 155 MPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDS 214

Query: 61  NFNPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDIT 104
            +N KLSDFGLAK GP    SHVST  +GTYGYAAPEY+ATG +T
Sbjct: 215 EYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLT 259

[Close]

BLAST of Cla003671 vs. Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34
Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGV--EPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDG 60
           M RGSLENHLFR+G   +PLSW TR+++A GAA GL FLH ++  VIYRDFKASNILLD 
Sbjct: 154 MTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDS 213

Query: 61  NFNPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDIT 104
           N+N KLSDFGLA+ GP   NSHVST  +GT GYAAPEY+ATG ++
Sbjct: 214 NYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLS 258

[Close]

BLAST of Cla003671 vs. Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-34
Identity = 72/105 (68.57%), Postives = 82/105 (78.10%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGV--EPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDG 60
           M RGSLENHLFR+G+  +PLSW+ R+K+A GAA GL FLH+SE  VIYRDFK SNILLD 
Sbjct: 154 MPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDS 213

Query: 61  NFNPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDIT 104
            +N KLSDFGLAK GP    SHVST  +GT+GYAAPEY+ATG +T
Sbjct: 214 EYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLT 258

[Close]

BLAST of Cla003671 vs. TrEMBL
Match: E5GBY8_CUCME (Serine/threonine-protein kinase cx32 OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-50
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF
Sbjct: 137 MQKGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 196

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           NPKLSDFGLAKLGP+NGNSHVSTNPVGTYGYAAPEYIATG +
Sbjct: 197 NPKLSDFGLAKLGPSNGNSHVSTNPVGTYGYAAPEYIATGHL 238

[Close]

BLAST of Cla003671 vs. TrEMBL
Match: A0A0A0KGQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G356490 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.9e-50
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQRGSLENHLFRKGVEPL WETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF
Sbjct: 137 MQRGSLENHLFRKGVEPLPWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 196

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           NPKLSDFGLAKLGP+NGNSHVSTNPVGTYGYAAPEYIATG +
Sbjct: 197 NPKLSDFGLAKLGPSNGNSHVSTNPVGTYGYAAPEYIATGHL 238

[Close]

BLAST of Cla003671 vs. TrEMBL
Match: W9QWV5_9ROSA (Putative serine/threonine-protein kinase Cx32 OS=Morus notabilis GN=L484_024856 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.3e-40
Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKG EPLSW TR+KIA GAA GL FLH SEKSVIYRDFK SNILLDGN+
Sbjct: 197 MQKGSLENHLFRKGAEPLSWSTRLKIAIGAARGLAFLHNSEKSVIYRDFKTSNILLDGNY 256

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           + KLSDFGLAKLGP NGNSHV+T  +GTYGYAAPEY+ATG +
Sbjct: 257 SAKLSDFGLAKLGPVNGNSHVTTRVMGTYGYAAPEYVATGHL 298

[Close]

BLAST of Cla003671 vs. TrEMBL
Match: B9R8N8_RICCO (Serine/threonine-protein kinase cx32, putative OS=Ricinus communis GN=RCOM_1601170 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.4e-40
Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKG EPL W  R+K+A GAA GL FLHTSEKSVIYRDFK SNILLDG++
Sbjct: 176 MQKGSLENHLFRKGAEPLPWHVRLKVAIGAAQGLAFLHTSEKSVIYRDFKTSNILLDGDY 235

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           N KLSDFGLAKLGP NGNSHV+T  +GTYGYAAPEY+ATG +
Sbjct: 236 NAKLSDFGLAKLGPINGNSHVTTRVMGTYGYAAPEYVATGHL 277

[Close]

BLAST of Cla003671 vs. TrEMBL
Match: F6I6T4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01260 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-39
Identity = 80/102 (78.43%), Postives = 92/102 (90.20%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFR G EPL+WE R+KIA GAA GL FLHTSEK+VIYRDFK+SN+LLDG++
Sbjct: 167 MQKGSLENHLFRVGAEPLTWEIRLKIAIGAARGLAFLHTSEKTVIYRDFKSSNVLLDGDY 226

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           N KLSDFGLAKLGP+NG+SHV+T  VGTYGYAAPEYIATG +
Sbjct: 227 NAKLSDFGLAKLGPSNGDSHVTTRIVGTYGYAAPEYIATGHL 268

[Close]

BLAST of Cla003671 vs. NCBI nr
Match: gi|659131370|ref|XP_008465651.1| (PREDICTED: probable serine/threonine-protein kinase NAK, partial [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 5.8e-50
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF
Sbjct: 127 MQKGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 186

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           NPKLSDFGLAKLGP+NGNSHVSTNPVGTYGYAAPEYIATG +
Sbjct: 187 NPKLSDFGLAKLGPSNGNSHVSTNPVGTYGYAAPEYIATGHL 228

[Close]

BLAST of Cla003671 vs. NCBI nr
Match: gi|307136143|gb|ADN33987.1| (serine/threonine-protein kinase cx32 [Cucumis melo subsp. melo])

HSP 1 Score: 205.7 bits (522), Expect = 5.8e-50
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF
Sbjct: 137 MQKGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 196

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           NPKLSDFGLAKLGP+NGNSHVSTNPVGTYGYAAPEYIATG +
Sbjct: 197 NPKLSDFGLAKLGPSNGNSHVSTNPVGTYGYAAPEYIATGHL 238

[Close]

BLAST of Cla003671 vs. NCBI nr
Match: gi|449452989|ref|XP_004144241.1| (PREDICTED: probable serine/threonine-protein kinase NAK [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 9.9e-50
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQRGSLENHLFRKGVEPL WETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF
Sbjct: 137 MQRGSLENHLFRKGVEPLPWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 196

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           NPKLSDFGLAKLGP+NGNSHVSTNPVGTYGYAAPEYIATG +
Sbjct: 197 NPKLSDFGLAKLGPSNGNSHVSTNPVGTYGYAAPEYIATGHL 238

[Close]

BLAST of Cla003671 vs. NCBI nr
Match: gi|703092190|ref|XP_010094560.1| (putative serine/threonine-protein kinase Cx32 [Morus notabilis])

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-40
Identity = 82/102 (80.39%), Postives = 90/102 (88.24%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKG EPLSW TR+KIA GAA GL FLH SEKSVIYRDFK SNILLDGN+
Sbjct: 197 MQKGSLENHLFRKGAEPLSWSTRLKIAIGAARGLAFLHNSEKSVIYRDFKTSNILLDGNY 256

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           + KLSDFGLAKLGP NGNSHV+T  +GTYGYAAPEY+ATG +
Sbjct: 257 SAKLSDFGLAKLGPVNGNSHVTTRVMGTYGYAAPEYVATGHL 298

[Close]

BLAST of Cla003671 vs. NCBI nr
Match: gi|255539232|ref|XP_002510681.1| (PREDICTED: probable serine/threonine-protein kinase NAK [Ricinus communis])

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39
Identity = 80/102 (78.43%), Postives = 89/102 (87.25%), Query Frame = 1


Query: 1   MQRGSLENHLFRKGVEPLSWETRIKIATGAACGLTFLHTSEKSVIYRDFKASNILLDGNF 60
           MQ+GSLENHLFRKG EPL W  R+K+A GAA GL FLHTSEKSVIYRDFK SNILLDG++
Sbjct: 176 MQKGSLENHLFRKGAEPLPWHVRLKVAIGAAQGLAFLHTSEKSVIYRDFKTSNILLDGDY 235

Query: 61  NPKLSDFGLAKLGPANGNSHVSTNPVGTYGYAAPEYIATGDI 103
           N KLSDFGLAKLGP NGNSHV+T  +GTYGYAAPEY+ATG +
Sbjct: 236 NAKLSDFGLAKLGPINGNSHVTTRVMGTYGYAAPEYVATGHL 277

The following BLAST results are available for this feature:

BLAST of Cla003671 vs. Swiss-Prot


Match Name	E-value	Identity	Description
APK2A_ARATH	2.1e-36	67.96	Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1	[more]
APK2B_ARATH	3.1e-35	66.99	Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=2 SV=1	[more]
APK1B_ARATH	9.0e-35	69.52	Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2	[more]
NAK_ARATH	1.5e-34	67.62	Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=1...	[more]
APK1A_ARATH	1.5e-34	68.57	Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1	[more]

BLAST of Cla003671 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBY8_CUCME	4.0e-50	96.08	Serine/threonine-protein kinase cx32 OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A0A0KGQ6_CUCSA	6.9e-50	96.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G356490 PE=3 SV=1	[more]
W9QWV5_9ROSA	1.3e-40	80.39	Putative serine/threonine-protein kinase Cx32 OS=Morus notabilis GN=L484_024856 ...	[more]
B9R8N8_RICCO	8.4e-40	78.43	Serine/threonine-protein kinase cx32, putative OS=Ricinus communis GN=RCOM_16011...	[more]
F6I6T4_VITVI	1.9e-39	78.43	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g01260 PE=3 SV=...	[more]

BLAST of Cla003671 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131370\|ref\|XP_008465651.1\|	5.8e-50	96.08	PREDICTED: probable serine/threonine-protein kinase NAK, partial [Cucumis melo]	[more]
gi\|307136143\|gb\|ADN33987.1\|	5.8e-50	96.08	serine/threonine-protein kinase cx32 [Cucumis melo subsp. melo]	[more]
gi\|449452989\|ref\|XP_004144241.1\|	9.9e-50	96.08	PREDICTED: probable serine/threonine-protein kinase NAK [Cucumis sativus]	[more]
gi\|703092190\|ref\|XP_010094560.1\|	1.9e-40	80.39	putative serine/threonine-protein kinase Cx32 [Morus notabilis]	[more]
gi\|255539232\|ref\|XP_002510681.1\|	1.2e-39	78.43	PREDICTED: probable serine/threonine-protein kinase NAK [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR008271	Ser/Thr_kinase_AS
IPR011009	Kinase-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla003671	Cla003671	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla003671	Cla003671.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla003671.1.cds3	Cla003671.1.cds3	CDS
Cla003671.1.cds2	Cla003671.1.cds2	CDS
Cla003671.1.cds1	Cla003671.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 1..99 score: 1.6
IPR000719	Protein kinase domain	PROFILE	PS50011	PROTEIN_KINASE_DOM	coord: 1..152 score:
IPR008271	Serine/threonine-protein kinase, active site	PROSITE	PS00108	PROTEIN_KINASE_ST	coord: 44..56 scor
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 1..135 score: 9.04
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 4..102 score: 5.2
None	No IPR available	PANTHER	PTHR27001	FAMILY NOT NAMED	coord: 1..102 score: 1.3
None	No IPR available	PANTHER	PTHR27001:SF5	SUBFAMILY NOT NAMED	coord: 1..102 score: 1.3