Cla003494 (gene) Watermelon (97103) v1

NameCla003494
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr3 : 12605842 .. 12608794 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGAGAGACGAAGAGAGGTAGGAAAACATGTCTATGGTAAAGTTGTGGAGAGTTCGGGTCGTTTTCATGGTGAAACCGAAGCTGGAATAGAGAGCTTGGCTGCTATCGCGCAATCCGAGCATGGTCTGGCATTTGGAAAAGAGCAAGCTAAGGAGATCAAGTTTCAAGCTAAAATTTTGAGGTTAGTAAGTTAACTCAATTTCTAACAACTCTTATGAAGGATGGTTGAGCTAATAATAAGGAGAAACATATAAACTTTTAGGCGGAAGTGACTAATACAGAATTACTGTGCAGTCTGGAGCAGCACAAGGTAATCTTGAAATATCTGACTAACGAGAAGAAGTTAAGCCTCGAAAATTTAAGGTAAGCTGGAAAAAATATTTCTTTACAAGTTTTTAGAAGGAAAGAAGTTCTAAATTTGGCTAGAAATGCAACTTTTAACAGATAGAAGTGAGAACAAAAAGGAAAGGAGGAAACTCTGCTGTCGAGTGTCGCTAGGAAGCGGGTGTCGCTGAGTAATTGAAGTGTAAGTAGCGGATGAGTGTCGCTGGGGCCCAGGGGGGTTTTCTGTCTCACAAATCTCGCTGGGTCTCGCTAGGTCTCGTTCCTCAGGTAAATCTCGCTGGTCTGCTCATCCTGGTGTCGCTAGTTCCATGTCCTGTTGTGTGTTTTCGCTAGTAATCTCGCTAGAAATGTGGAATCTCGCTGGTAATCTCGCTAGTGATACAAAATCTAGCTTATTATGATTACTTTGGGAAATAGGAGGGTCTTGGTGATAAATCATGATTAGAGTTTAATTTTGCACTTAATGATCATGGAAAGGAAGTTTAAGGAAAGCTTATCGTGAGAAATGTGTATTTACAGGCCAAGAAGAGCTCGAAAAGGCATATAATCCGCTCACGGCCTAGGACAAGTCGTGAGTGATTTTCTATTTTATATAATGATTACTCTTAGCATGTTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGGCTCTCACGTCGGAATTCGAAGGGCACCAAGACTATCTCGAACTCTTTTCCTCTTCCTTGCAACTAACTCACCCTTTGAACTCTCACTTAATACTATTCTTTTTGTGCCTCTTTAGGTCTGTAACTTCCTTGATTTGCTTTGATTTTCTTTTCTGATTTGGGCTGCTGGAAACCCCCAAATTTCATTTAAGAAAAGTTGGCGCCGCGGCGCTAGGGCTGCATCAGAAAAGTTTGCTCTCGGGTTTTAGCATCGCGACGCTGTGATGCGTTTCAGAAATATTGTTCCCGGGCATTAGCGTCGCAACAACGCCGTCCAAGTGTCGCGACGCTGTCATGCGTTCAACAAGGATGCGTCGAGGTAGCGCCATCTCGGCACCGCAGTGCTACTATGAGTCCAAAATGATGCGTTTATGTTTTAGCGTCACAGCAGCGCCCTCCTGGCGCCGCGACGCTATCCCAAAATTCGCCCTTTTGAGTTTTTCAGCTCTTTTTTGCCGTATTCTTGCTCGGTTTTGATCTTTTAGTCGTTTCTTCTAATTTTTCTCGTTTTAACCTGAAAATCACTAGCAAACAAGTGAAATCTAATATAAACTCCCTTAATTTGAGAGAATAGAAAGCACTTTTCAAGTGCTTATCAGCAAGTTATGTTAATTTTTATTAAGAAATCTTCCTTTGCGTTATACTCTTGTATTTTTAGGATGATAAATGATTTTACCACTTTTTGAGCTTAAAACGCATGTTCTGGCCGAGGGACCACGTATGAAGGCAAATGGGGAATACGTTATATGATACTCAGTGCTGAGGGACCACGTGTGAAGGCACTTGAGTAGTTAAATGAAATGGATTCCAATGCCGAGGGACCTTGTGAGAAGGCATATGGAAATCCAATACATGATAGCTCAGTGCTAAGGGACCACGAGTGAAGGCACTTGAGCAGTGGATTGATATGGAACCCAGTGCCGAGGGACCACGTGAGAAGGCATATGGGAACTTCGATATAGTGAAACTCAGTGCCAAGGGACAATATGAGAAGGCACTTGAGGGTTTGAAATGCCGAGGGACGATATGTGAAGGCATTTGTGCCGAGGGACTCGTGTGA

mRNA sequence

ATGGTTGAGAGACGAAGAGAGGTAGGAAAACATGTCTATGGTAAAGTTGTGGAGAGTTCGGGTCGTTTTCATGGTGAAACCGAAGCTGGAATAGAGAGCTTGGCTGCTATCGCGCAATCCGAGCATGGTCTGGCATTTGGAAAAGAGCAAGCTAAGGAGATCAAGTTTCAAGCTAAAATTTTGAGTCTGGAGCAGCACAAGGTAATCTTGAAATATCTGACTAACGAGAAGAAGTTAAGCCTCGAAAATTTAAGTGCTAAGGGACCACGAGTGAAGGCACTTGAGCAGTGGATTGATATGGAACCCAGTGCCGAGGGACCACGTGAGAAGGCATATGGGAACTTCGATATAGTGAAACTCAGTGCCAAGGGACAATATGAGAAGGCACTTGAGGGTTTGAAATGCCGAGGGACGATATGTGAAGGCATTTGTGCCGAGGGACTCGTGTGA

Coding sequence (CDS)

ATGGTTGAGAGACGAAGAGAGGTAGGAAAACATGTCTATGGTAAAGTTGTGGAGAGTTCGGGTCGTTTTCATGGTGAAACCGAAGCTGGAATAGAGAGCTTGGCTGCTATCGCGCAATCCGAGCATGGTCTGGCATTTGGAAAAGAGCAAGCTAAGGAGATCAAGTTTCAAGCTAAAATTTTGAGTCTGGAGCAGCACAAGGTAATCTTGAAATATCTGACTAACGAGAAGAAGTTAAGCCTCGAAAATTTAAGTGCTAAGGGACCACGAGTGAAGGCACTTGAGCAGTGGATTGATATGGAACCCAGTGCCGAGGGACCACGTGAGAAGGCATATGGGAACTTCGATATAGTGAAACTCAGTGCCAAGGGACAATATGAGAAGGCACTTGAGGGTTTGAAATGCCGAGGGACGATATGTGAAGGCATTTGTGCCGAGGGACTCGTGTGA

Protein sequence

MVERRREVGKHVYGKVVESSGRFHGETEAGIESLAAIAQSEHGLAFGKEQAKEIKFQAKILSLEQHKVILKYLTNEKKLSLENLSAKGPRVKALEQWIDMEPSAEGPREKAYGNFDIVKLSAKGQYEKALEGLKCRGTICEGICAEGLV
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003494Cla003494.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla003494ClCG03G009650Watermelon (Charleston Gray)wcgwmB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla003494Cucurbita maxima (Rimu)cmawmB674
Cla003494Watermelon (Charleston Gray)wcgwmB231
Cla003494Cucurbita pepo (Zucchini)cpewmB401
Cla003494Bottle gourd (USVL1VR-Ls)lsiwmB010
Cla003494Watermelon (97103) v2wmwmbB131