MELO3C009464T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C009464T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Guanine nucleotide-binding protein G(s) subunit alpha
Location	chr4 : 30727998 .. 30728342 (-)
Sequence length	345

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAGGCGTAGTACCTCCGGTGGAAATCGAAGAAGACGATGACCTCTTCGAGATCGATCTCGAGGCCGTCAACAGCATTACTTCACCGCCAAATTTCTCTGATGATCCTTGCGGTTTCTTCACAACTGCCGGTGGTGCCACGCTCCTCGCCAATTGTCTGTTGCCGATCACCGACGTGTCTAATGCCGTTCCGATAGGTGATTCCAACGAAGGCGAGATATTTTTGTTCGCGATGCCATCGGAGCCGACACACCTAGAGAAGGCTCTTCGGTTACCGTTGGGTTTGGGGCTTCATCGAGCTTTGATTGATTGTTTGGAGATGAAGATAACTAGCCGATGA

mRNA sequence

ATGGCCTCAGGCGTAGTACCTCCGGTGGAAATCGAAGAAGACGATGACCTCTTCGAGATCGATCTCGAGGCCGTCAACAGCATTACTTCACCGCCAAATTTCTCTGATGATCCTTGCGGTTTCTTCACAACTGCCGGTGGTGCCACGCTCCTCGCCAATTGTCTGTTGCCGATCACCGACGTGTCTAATGCCGTTCCGATAGGTGATTCCAACGAAGGCGAGATATTTTTGTTCGCGATGCCATCGGAGCCGACACACCTAGAGAAGGCTCTTCGGTTACCGTTGGGTTTGGGGCTTCATCGAGCTTTGATTGATTGTTTGGAGATGAAGATAACTAGCCGATGA

Coding sequence (CDS)

ATGGCCTCAGGCGTAGTACCTCCGGTGGAAATCGAAGAAGACGATGACCTCTTCGAGATCGATCTCGAGGCCGTCAACAGCATTACTTCACCGCCAAATTTCTCTGATGATCCTTGCGGTTTCTTCACAACTGCCGGTGGTGCCACGCTCCTCGCCAATTGTCTGTTGCCGATCACCGACGTGTCTAATGCCGTTCCGATAGGTGATTCCAACGAAGGCGAGATATTTTTGTTCGCGATGCCATCGGAGCCGACACACCTAGAGAAGGCTCTTCGGTTACCGTTGGGTTTGGGGCTTCATCGAGCTTTGATTGATTGTTTGGAGATGAAGATAACTAGCCGATGA

Protein sequence

MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITSR*

Homology

[Close]

BLAST of MELO3C009464T1 vs. TrEMBL
Match: A0A0A0LEJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G776340 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.4e-48
Identity = 99/114 (86.84%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60
           MASG+  P+EIEEDDDLFEIDLEAVNSI SPPNFSDD CGFFTTAG  TLLANCLLPITD
Sbjct: 1   MASGI-DPLEIEEDDDLFEIDLEAVNSIISPPNFSDDTCGFFTTAGDTTLLANCLLPITD 60

Query: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITSR 115
           VS+AVP+GDSNE EIFLFAMPSEPTHLEKAL+LPLG  LHRALIDCLEMKITS+
Sbjct: 61  VSSAVPVGDSNECEIFLFAMPSEPTHLEKALQLPLGFELHRALIDCLEMKITSQ 113

[Close]

BLAST of MELO3C009464T1 vs. TrEMBL
Match: A0A0L9TVC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g067800 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.2e-11
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 1


Query: 10  EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
           E+EE++DLFEIDL+AVN + SPP F +  C  +T+ G   LLANCLLP +DVS+AVP   
Sbjct: 21  ELEEEEDLFEIDLDAVNCV-SPPRFWESCC--YTSTGNIALLANCLLPKSDVSSAVPAVC 80

Query: 70  SNEGEIFLFAMPSEPTHLEKALRLP 95
           S+ G+  +  + +EP  L + LRLP
Sbjct: 81  SSAGKTSV-VLIAEPISLGEYLRLP 101

[Close]

BLAST of MELO3C009464T1 vs. TrEMBL
Match: A0A0S3STB9_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.08G296900 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.2e-11
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 1


Query: 10  EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
           E+EE++DLFEIDL+AVN + SPP F +  C  +T+ G   LLANCLLP +DVS+AVP   
Sbjct: 20  ELEEEEDLFEIDLDAVNCV-SPPRFWESCC--YTSTGNIALLANCLLPKSDVSSAVPAVC 79

Query: 70  SNEGEIFLFAMPSEPTHLEKALRLP 95
           S+ G+  +  + +EP  L + LRLP
Sbjct: 80  SSAGKTSV-VLIAEPISLGEYLRLP 100

[Close]

BLAST of MELO3C009464T1 vs. TrEMBL
Match: A0A0B2Q124_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_038745 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.0e-10
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 10 EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
          E+EE+++LFEIDLEAVN I  PP+F +  C ++T+ G   LLANCLLPI+DVS A+P   
Sbjct: 19 ELEEEEELFEIDLEAVNCIP-PPHFLES-C-YYTSTGNIALLANCLLPISDVSKAIPAVS 78

Query: 70 SNEGEIFLFAMPSEPTHLEKALRLP 95
            E    +  + +EPT L + LRLP
Sbjct: 79 FEERTNVV--LITEPTSLGEYLRLP 98

[Close]

BLAST of MELO3C009464T1 vs. TrEMBL
Match: K7LHW8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G071300 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.0e-10
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 10 EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
          E+EE+++LFEIDLEAVN I  PP+F +  C ++T+ G   LLANCLLPI+DVS A+P   
Sbjct: 19 ELEEEEELFEIDLEAVNCIP-PPHFLES-C-YYTSTGNIALLANCLLPISDVSKAIPAVS 78

Query: 70 SNEGEIFLFAMPSEPTHLEKALRLP 95
            E    +  + +EPT L + LRLP
Sbjct: 79 FEERTNVV--LITEPTSLGEYLRLP 98

[Close]

BLAST of MELO3C009464T1 vs. TAIR10
Match: AT2G36295.1 (AT2G36295.1 unknown protein)

HSP 1 Score: 52.8 bits (125), Expect = 1.7e-07
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = 1


Query: 10 EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVP 67
          E + +DDLFEI+LEAV+   + P +    C       G+ LLANCLLP  ++SNAVP
Sbjct: 32 EEDGEDDLFEINLEAVSDTATSPPYD---CQRLPARTGSVLLANCLLPAAEISNAVP 85

[Close]

BLAST of MELO3C009464T1 vs. NCBI nr
Match: gi|659084334|ref|XP_008442832.1| (PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 5.7e-58
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 1


Query: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60
           MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD
Sbjct: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60

Query: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITSR 115
           VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITSR
Sbjct: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITSR 114

[Close]

BLAST of MELO3C009464T1 vs. NCBI nr
Match: gi|700203989|gb|KGN59122.1| (hypothetical protein Csa_3G776340 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 9.1e-48
Identity = 99/114 (86.84%), Postives = 105/114 (92.11%), Query Frame = 1


Query: 1   MASGVVPPVEIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITD 60
           MASG+  P+EIEEDDDLFEIDLEAVNSI SPPNFSDD CGFFTTAG  TLLANCLLPITD
Sbjct: 1   MASGI-DPLEIEEDDDLFEIDLEAVNSIISPPNFSDDTCGFFTTAGDTTLLANCLLPITD 60

Query: 61  VSNAVPIGDSNEGEIFLFAMPSEPTHLEKALRLPLGLGLHRALIDCLEMKITSR 115
           VS+AVP+GDSNE EIFLFAMPSEPTHLEKAL+LPLG  LHRALIDCLEMKITS+
Sbjct: 61  VSSAVPVGDSNECEIFLFAMPSEPTHLEKALQLPLGFELHRALIDCLEMKITSQ 113

[Close]

BLAST of MELO3C009464T1 vs. NCBI nr
Match: gi|965609597|dbj|BAT96088.1| (hypothetical protein VIGAN_08296900, partial [Vigna angularis var. angularis])

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-11
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 1


Query: 10  EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
           E+EE++DLFEIDL+AVN + SPP F +  C  +T+ G   LLANCLLP +DVS+AVP   
Sbjct: 20  ELEEEEDLFEIDLDAVNCV-SPPRFWESCC--YTSTGNIALLANCLLPKSDVSSAVPAVC 79

Query: 70  SNEGEIFLFAMPSEPTHLEKALRLP 95
           S+ G+  +  + +EP  L + LRLP
Sbjct: 80  SSAGKTSV-VLIAEPISLGEYLRLP 100

[Close]

BLAST of MELO3C009464T1 vs. NCBI nr
Match: gi|920691303|gb|KOM34528.1| (hypothetical protein LR48_Vigan02g067800 [Vigna angularis])

HSP 1 Score: 75.1 bits (183), Expect = 8.9e-11
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 1


Query: 10  EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
           E+EE++DLFEIDL+AVN + SPP F +  C  +T+ G   LLANCLLP +DVS+AVP   
Sbjct: 21  ELEEEEDLFEIDLDAVNCV-SPPRFWESCC--YTSTGNIALLANCLLPKSDVSSAVPAVC 80

Query: 70  SNEGEIFLFAMPSEPTHLEKALRLP 95
           S+ G+  +  + +EP  L + LRLP
Sbjct: 81  SSAGKTSV-VLIAEPISLGEYLRLP 101

[Close]

BLAST of MELO3C009464T1 vs. NCBI nr
Match: gi|571485417|ref|XP_006589849.1| (PREDICTED: uncharacterized protein LOC102669210 [Glycine max])

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-10
Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 1


Query: 10 EIEEDDDLFEIDLEAVNSITSPPNFSDDPCGFFTTAGGATLLANCLLPITDVSNAVPIGD 69
          E+EE+++LFEIDLEAVN I  PP+F +  C ++T+ G   LLANCLLPI+DVS A+P   
Sbjct: 19 ELEEEEELFEIDLEAVNCIP-PPHFLES-C-YYTSTGNIALLANCLLPISDVSKAIPAVS 78

Query: 70 SNEGEIFLFAMPSEPTHLEKALRLP 95
            E    +  + +EPT L + LRLP
Sbjct: 79 FEERTNVV--LITEPTSLGEYLRLP 98

The following BLAST results are available for this feature:

BLAST of MELO3C009464T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEJ9_CUCSA	6.4e-48	86.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G776340 PE=4 SV=1	[more]
A0A0L9TVC2_PHAAN	6.2e-11	50.59	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g067800 PE=4 SV=1	[more]
A0A0S3STB9_PHAAN	6.2e-11	50.59	Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.08...	[more]
A0A0B2Q124_GLYSO	4.0e-10	50.59	Uncharacterized protein OS=Glycine soja GN=glysoja_038745 PE=4 SV=1	[more]
K7LHW8_SOYBN	4.0e-10	50.59	Uncharacterized protein OS=Glycine max GN=GLYMA_10G071300 PE=4 SV=1	[more]

BLAST of MELO3C009464T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G36295.1	1.7e-07	47.37	unknown protein	[more]

BLAST of MELO3C009464T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084334\|ref\|XP_008442832.1\|	5.7e-58	100.00	PREDICTED: uncharacterized protein LOC103486601 [Cucumis melo]	[more]
gi\|700203989\|gb\|KGN59122.1\|	9.1e-48	86.84	hypothetical protein Csa_3G776340 [Cucumis sativus]	[more]
gi\|965609597\|dbj\|BAT96088.1\|	8.9e-11	50.59	hypothetical protein VIGAN_08296900, partial [Vigna angularis var. angularis]	[more]
gi\|920691303\|gb\|KOM34528.1\|	8.9e-11	50.59	hypothetical protein LR48_Vigan02g067800 [Vigna angularis]	[more]
gi\|571485417\|ref\|XP_006589849.1\|	5.8e-10	50.59	PREDICTED: uncharacterized protein LOC102669210 [Glycine max]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C009464	MELO3C009464	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C009464T1	MELO3C009464T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C009464T1.cds1	MELO3C009464T1.cds1	CDS