MELO3C005997T1 (mRNA) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAATCTTCCTCGCTTTGGCCGTGCACGGCAACGTCTTCCTGCGGTGCCGCCGCCAGTTCCCGCCGCAGCACAGCCTGCTGTCGAACCCAGGTATCAAATTCTGCCGTTTGCTACGACCATCACTACGCCCGCCCCGGCTTCTCCTCGGAGAGAATCCCCTCGCCCGCTTTCTTCTCCACCGAAGAAAGCCACGTCACCGTTTGCATCACCAAAATATGGAGATTCTCGCACACGTTTGGACAGATCGCCGGCGGCGAAGGCCACAATGTCGCCTCCGGATTCGGTTAGAGATAAATATTTTGAGAGGAGGAATGGGGAAACAACCCCACCTCTGTCGCCGGCCAAGTCCCGGCGAGCAAAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTAACCAAGTGTTTACCGGGAACGGGACGACGGCTCAACCCAGGTATATTAACTTAATTCTCAATTAAATATATTTGTCTTTTCGTCGTTAAGCTCACTTTTGGAAATGTATATTTATTCAACTTTTGTCAATTGTTAGGCCAATTAATTGACTTTGACTTATTGACCATGGTTCATTTTCACATGTACCCATTATACTAAAAACACTTTCATATTTGTTACAAAATTTATGACTAAATTATAACGAATGTTCTTCAGAAAAATCTTTATACTTCCCATTTTGCAATATTAACTCCAAACCCAGTGAATATTTCAAAACTATCCTTAGGGTAGTGTAAGTTCTTTAGAAAATTTATACAAAAATCAAGATTTAGAATGGTATGTATGACTTAAAACAACGTTTATAAATTCAATTTTTTATTTCATATTACTTATCACACTTTTATATTAAAAAGTTTCGCTGCTTTTCTAAAACTTTTAAGAAACTTTTATTAATGATTCATATGGTCAATATCAGGGTTCAACCGGAGGTGGAGACCAAAGGCATTGTATACAACAAGACCGTTGAGAAGCCATCGAAGTCAAACCGGTCGTCGGGCGAGTACGGCTCCAGCAAGTCACACCAAAAGAAGCAGAAGCCGGAGGTTATAAAACTCAAAGGACATAACGTTGGCGCCGTCATGGAAATAAACAAGTCATCCACTGGCTATCGTTTGGGCGGAGAAACCTTAAAAAAGAACGAAACAGAAGACGTCGGCGATGTCCATGGATATGGACATGAAGATAAGAAAACGGAGACAAAGAAGAAGGAACCGCCGATAACCGCATTTATGAATAGTAATTTTCAGAGTGTAAACAATTCTCTTCTGTTCGACTCGTCGTGCAACCACCGTGATCCTGGCCTGCATCTCGCGTTTCCCGATGCGGTGGATGGTGATGGAGCCATTGTTGACGGCCAGAAGAGTTACAAGCCCAAGCGTCAGTGAGGTTGGACGGAGAGAAGTAGTACTATGTTATTATTATATGAAATAAGCCATTTAAGGGT ATGGCGAATCTTCCTCGCTTTGGCCGTGCACGGCAACGTCTTCCTGCGGTGCCGCCGCCAGTTCCCGCCGCAGCACAGCCTGCTGTCGAACCCAGGTATCAAATTCTGCCGTTTGCTACGACCATCACTACGCCCGCCCCGGCTTCTCCTCGGAGAGAATCCCCTCGCCCGCTTTCTTCTCCACCGAAGAAAGCCACGTCACCGTTTGCATCACCAAAATATGGAGATTCTCGCACACGTTTGGACAGATCGCCGGCGGCGAAGGCCACAATGTCGCCTCCGGATTCGGTTAGAGATAAATATTTTGAGAGGAGGAATGGGGAAACAACCCCACCTCTGTCGCCGGCCAAGTCCCGGCGAGCAAAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTAACCAAGTGTTTACCGGGAACGGGACGACGGCTCAACCCAGGGTTCAACCGGAGGTGGAGACCAAAGGCATTGTATACAACAAGACCGTTGAGAAGCCATCGAAGTCAAACCGGTCGTCGGGCGAGTACGGCTCCAGCAAGTCACACCAAAAGAAGCAGAAGCCGGAGGTTATAAAACTCAAAGGACATAACGTTGGCGCCGTCATGGAAATAAACAAGTCATCCACTGGCTATCGTTTGGGCGGAGAAACCTTAAAAAAGAACGAAACAGAAGACGTCGGCGATGTCCATGGATATGGACATGAAGATAAGAAAACGGAGACAAAGAAGAAGGAACCGCCGATAACCGCATTTATGAATAGTAATTTTCAGAGTGTAAACAATTCTCTTCTGTTCGACTCGTCGTGCAACCACCGTGATCCTGGCCTGCATCTCGCGTTTCCCGATGCGGTGGATGGTGATGGAGCCATTGTTGACGGCCAGAAGAGTTACAAGCCCAAGCGTCAGTGAGGTTGGACGGAGAGAAGTAGTACTATGTTATTATTATATGAAATAAGCCATTTAAGGGT ATGGCGAATCTTCCTCGCTTTGGCCGTGCACGGCAACGTCTTCCTGCGGTGCCGCCGCCAGTTCCCGCCGCAGCACAGCCTGCTGTCGAACCCAGGTATCAAATTCTGCCGTTTGCTACGACCATCACTACGCCCGCCCCGGCTTCTCCTCGGAGAGAATCCCCTCGCCCGCTTTCTTCTCCACCGAAGAAAGCCACGTCACCGTTTGCATCACCAAAATATGGAGATTCTCGCACACGTTTGGACAGATCGCCGGCGGCGAAGGCCACAATGTCGCCTCCGGATTCGGTTAGAGATAAATATTTTGAGAGGAGGAATGGGGAAACAACCCCACCTCTGTCGCCGGCCAAGTCCCGGCGAGCAAAGACGCCGCCGCTTTCTCCTCTTGCTCTGCCACGTAACCAAGTGTTTACCGGGAACGGGACGACGGCTCAACCCAGGGTTCAACCGGAGGTGGAGACCAAAGGCATTGTATACAACAAGACCGTTGAGAAGCCATCGAAGTCAAACCGGTCGTCGGGCGAGTACGGCTCCAGCAAGTCACACCAAAAGAAGCAGAAGCCGGAGGTTATAAAACTCAAAGGACATAACGTTGGCGCCGTCATGGAAATAAACAAGTCATCCACTGGCTATCGTTTGGGCGGAGAAACCTTAAAAAAGAACGAAACAGAAGACGTCGGCGATGTCCATGGATATGGACATGAAGATAAGAAAACGGAGACAAAGAAGAAGGAACCGCCGATAACCGCATTTATGAATAGTAATTTTCAGAGTGTAAACAATTCTCTTCTGTTCGACTCGTCGTGCAACCACCGTGATCCTGGCCTGCATCTCGCGTTTCCCGATGCGGTGGATGGTGATGGAGCCATTGTTGACGGCCAGAAGAGTTACAAGCCCAAGCGTCAGTGA MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSSPPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRRAKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIVDGQKSYKPKRQ*
BLAST of MELO3C005997T1 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 2.2e-132 Identity = 245/302 (81.13%), Postives = 263/302 (87.09%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.9e-44 Identity = 134/309 (43.37%), Postives = 172/309 (55.66%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31 Identity = 116/307 (37.79%), Postives = 153/307 (49.84%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.2e-22 Identity = 87/255 (34.12%), Postives = 123/255 (48.24%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TrEMBL
Match: A0A151TY38_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011256 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.0e-21 Identity = 94/313 (30.03%), Postives = 142/313 (45.37%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15 Identity = 80/321 (24.92%), Postives = 117/321 (36.45%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TAIR10
Match: AT4G00890.1 (AT4G00890.1 proline-rich family protein) HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10 Identity = 72/275 (26.18%), Postives = 102/275 (37.09%), Query Frame = 1
BLAST of MELO3C005997T1 vs. TAIR10
Match: AT1G75260.1 (AT1G75260.1 oxidoreductases, acting on NADH or NADPH) HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06 Identity = 44/173 (25.43%), Postives = 69/173 (39.88%), Query Frame = 1
BLAST of MELO3C005997T1 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo]) HSP 1 Score: 615.5 bits (1586), Expect = 4.8e-173 Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 1
BLAST of MELO3C005997T1 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus]) HSP 1 Score: 479.9 bits (1234), Expect = 3.2e-132 Identity = 245/302 (81.13%), Postives = 263/302 (87.09%), Query Frame = 1
BLAST of MELO3C005997T1 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 5.6e-44 Identity = 134/309 (43.37%), Postives = 172/309 (55.66%), Query Frame = 1
BLAST of MELO3C005997T1 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo]) HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41 Identity = 127/309 (41.10%), Postives = 166/309 (53.72%), Query Frame = 1
BLAST of MELO3C005997T1 vs. NCBI nr
Match: gi|778676797|ref|XP_011650663.1| (PREDICTED: gibberellin-regulated protein 14-like [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31 Identity = 116/307 (37.79%), Postives = 153/307 (49.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
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