Cla021277 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGCCACTGTGCAATGCTGTCAAAAGTTGGAATCCCTCACGAACAACCTCGGTGTACTCTCCAATCAATGAACTTCGAGACCTCCTACTCCTTGATTGCAAGCTACTTCCAGACCATCTACCGCTGGGGTAGTCGAAAAGTACTCTGACGTGGACGAGCTAGCAAAAGGTGGATCAGGAATATAAAAGTTCTCAAAATTTTGGGGATTGGTTGTTCAGGATGTCCTCGTTCTCCTCTCCCATAACAGGTTCATATCCGATCTCTGCAGTGGTGGTTGCATGACTCCCTATGGCTCTGTCTTTGCCGAATACAATGGCCAAGTCATCATAGTATGGAAATGACTTATGGCGCAGTTCTTTTACACTCAGATGACTCTGTTAAAAGTGGCTTGTGTTATGTTATGGCCTATGCAAATTTAAACGAAGAAGAAATAAATAAAACATGTAATTAAATTACTTTGACCCATGCGTCAAATATCTCCGCCTCACAATTAATATATTTGCGCTCCACATTCCACCCAAACCCACTACAGTCTGGGCCAACATTTTAGCGATCGCACTGTAATGTCGTACTGTCTCTTCAGGGTGTTCCATACAGGTCAGCCCACATCTGGAGTCAAGGGTCAGGACCCTGAAGAGACAGTACAGTGGGTTTGGGTGGAATGTGGAGCGCAAATGTATTGATTGTGAGGCGGAGATATTTGACGCATGGGTCATTTCCATACTTAATTTAATTACATGTTTTATTTATTTCTTCTTCGTTTAAATTTGTATAGGCCATAACATAACACAAGCCACCTTTAACAGAGTCATCCGAGTGCAAAAGAACTGCGCCATAAGTCATTTTCATACTATGATGACTTGGCCATCGTATTCGGCAAAGATAGAGCCACAAGGAGTCATGCAACCACCACTGCAGAGATCAGATATGAACCTGTTATGGGAGAGGAGAACGAAGACATCCTGAACAACCAGTCCCTAGACTTTGAGAACTTTTATATTCCTGATCCACCTTTTGCTAGCTCGCCCACGTCAGAGGACTTTTCGACTACTCCCAGCGGTAGATGGTTTGGGAGTAGCTTGCCATCAAGGAGTAGTAGGTCCCGAAGTTCATCGATTGGAGAGTACAGCAAGGTGGTTCGTGAGGGATTCCAACTTCTGACGAAGTCTATTGACGGCATTGCACAGTGGCCTGTCATGAACGAGGACCTGGCAAGGCGTCGTCGTCGTTGA ATGACAAGCCACTGTGCAATGCTGTCAAAAGTTGGAATCCCTCACGAACAACCTCGGTGTACTCTCCAATCAATGAACTTCGAGACCTCCTACTCCTTGATTGCAAGCTACTTCCAGACCATCTACCGCTGGGGTAGTCGAAAAGTCAGCCCACATCTGGAGTCAAGGGTCAGGACCCTGAAGAGACAGTACAGTGGGTTTGGGTGGAATGTGGAGCGCAAATGTATTGATTGTGAGGCGGAGATATTTGACGCATGGAGTCATCCGAGTGCAAAAGAACTGCGCCATAAGTCATTTTCATACTATGATGACTTGGCCATCGTATTCGGCAAAGATAGAGCCACAAGGAGTCATGCAACCACCACTGCAGAGATCAGATATGAACCTGTTATGGGAGAGGAGAACGAAGACATCCTGAACAACCAGTCCCTAGACTTTGAGAACTTTTATATTCCTGATCCACCTTTTGCTAGCTCGCCCACGTCAGAGGACTTTTCGACTACTCCCAGCGGTAGATGGTTTGGGAGTAGCTTGCCATCAAGGAGTAGTAGGTCCCGAAGTTCATCGATTGGAGAGTACAGCAAGGTGGTTCGTGAGGGATTCCAACTTCTGACGAAGTCTATTGACGGCATTGCACAGTGGCCTGTCATGAACGAGGACCTGGCAAGGCGTCGTCGTCGTTGA ATGACAAGCCACTGTGCAATGCTGTCAAAAGTTGGAATCCCTCACGAACAACCTCGGTGTACTCTCCAATCAATGAACTTCGAGACCTCCTACTCCTTGATTGCAAGCTACTTCCAGACCATCTACCGCTGGGGTAGTCGAAAAGTCAGCCCACATCTGGAGTCAAGGGTCAGGACCCTGAAGAGACAGTACAGTGGGTTTGGGTGGAATGTGGAGCGCAAATGTATTGATTGTGAGGCGGAGATATTTGACGCATGGAGTCATCCGAGTGCAAAAGAACTGCGCCATAAGTCATTTTCATACTATGATGACTTGGCCATCGTATTCGGCAAAGATAGAGCCACAAGGAGTCATGCAACCACCACTGCAGAGATCAGATATGAACCTGTTATGGGAGAGGAGAACGAAGACATCCTGAACAACCAGTCCCTAGACTTTGAGAACTTTTATATTCCTGATCCACCTTTTGCTAGCTCGCCCACGTCAGAGGACTTTTCGACTACTCCCAGCGGTAGATGGTTTGGGAGTAGCTTGCCATCAAGGAGTAGTAGGTCCCGAAGTTCATCGATTGGAGAGTACAGCAAGGTGGTTCGTGAGGGATTCCAACTTCTGACGAAGTCTATTGACGGCATTGCACAGTGGCCTGTCATGAACGAGGACCTGGCAAGGCGTCGTCGTCGTTGA MTSHCAMLSKVGIPHEQPRCTLQSMNFETSYSLIASYFQTIYRWGSRKVSPHLESRVRTLKRQYSGFGWNVERKCIDCEAEIFDAWSHPSAKELRHKSFSYYDDLAIVFGKDRATRSHATTTAEIRYEPVMGEENEDILNNQSLDFENFYIPDPPFASSPTSEDFSTTPSGRWFGSSLPSRSSRSRSSSIGEYSKVVREGFQLLTKSIDGIAQWPVMNEDLARRRRR
BLAST of Cla021277 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.5e-19 Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1
BLAST of Cla021277 vs. TrEMBL
Match: A0A162AHN3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_009785 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14 Identity = 51/127 (40.16%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of Cla021277 vs. TrEMBL
Match: A0A161XV48_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018898 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14 Identity = 51/119 (42.86%), Postives = 64/119 (53.78%), Query Frame = 1
BLAST of Cla021277 vs. TrEMBL
Match: A0A0J8BIR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018220 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 7.0e-14 Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 1
BLAST of Cla021277 vs. TrEMBL
Match: A0A0A0M0S6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665930 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.1e-14 Identity = 53/153 (34.64%), Postives = 79/153 (51.63%), Query Frame = 1
BLAST of Cla021277 vs. NCBI nr
Match: gi|659111294|ref|XP_008455678.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 105.1 bits (261), Expect = 1.6e-19 Identity = 65/180 (36.11%), Postives = 93/180 (51.67%), Query Frame = 1
BLAST of Cla021277 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 104.0 bits (258), Expect = 3.5e-19 Identity = 64/194 (32.99%), Postives = 95/194 (48.97%), Query Frame = 1
BLAST of Cla021277 vs. NCBI nr
Match: gi|659125386|ref|XP_008462659.1| (PREDICTED: uncharacterized protein LOC103500963 [Cucumis melo]) HSP 1 Score: 101.7 bits (252), Expect = 1.8e-18 Identity = 58/159 (36.48%), Postives = 86/159 (54.09%), Query Frame = 1
BLAST of Cla021277 vs. NCBI nr
Match: gi|659071532|ref|XP_008460440.1| (PREDICTED: uncharacterized protein LOC103499248 [Cucumis melo]) HSP 1 Score: 99.4 bits (246), Expect = 8.7e-18 Identity = 58/154 (37.66%), Postives = 84/154 (54.55%), Query Frame = 1
BLAST of Cla021277 vs. NCBI nr
Match: gi|659125959|ref|XP_008462939.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 94.4 bits (233), Expect = 2.8e-16 Identity = 50/121 (41.32%), Postives = 70/121 (57.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |