Cla002075.1 (mRNA) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCAAGCAATTCCTTACCGATCATGGCAATCAATTGACACAAAACAAACCGCATTATCAATCAGACCACCATGGGGCGGCGGCGGATCAGCATCGACGACGGCAGAGGGTGGCCCGGGAAGTAGAAGCGACGTGACTGCGTCGGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGTCTTCTTTTAGGACTGGGAGCCAATCCGGCCGTGTACGAGGTGGAGGAAGAACATGAATCTGGGGTCCTTAAGGAATTGGAAGCCTTTGCCAAATCTTCCAACGTTAAACTACAATTGCCGGCTGTGTTTATTGGAGGCACCTTGTTTGGGGGTTTGGATAAAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTGA ATGCAGCAAGCAATTCCTTACCGATCATGGCAATCAATTGACACAAAACAAACCGCATTATCAATCAGACCACCATGGGGCGGCGGCGGATCAGCATCGACGACGGCAGAGGGTGGCCCGGGAAGTAGAAGCGACGTGACTGCGTCGGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGTCTTCTTTTAGGACTGGGAGCCAATCCGGCCGTGTACGAGGTGGAGGAAGAACATGAATCTGGGGTCCTTAAGGAATTGGAAGCCTTTGCCAAATCTTCCAACGTTAAACTACAATTGCCGGCTGTGTTTATTGGAGGCACCTTGTTTGGGGGTTTGGATAAAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTGA ATGCAGCAAGCAATTCCTTACCGATCATGGCAATCAATTGACACAAAACAAACCGCATTATCAATCAGACCACCATGGGGCGGCGGCGGATCAGCATCGACGACGGCAGAGGGTGGCCCGGGAAGTAGAAGCGACGTGACTGCGTCGGTGTCGGAGAGTGCGGCCATAGTGTTTGCTAGAAGAGGGTGCTGTATGAGCCATGTGGTGAAGCGTCTTCTTTTAGGACTGGGAGCCAATCCGGCCGTGTACGAGGTGGAGGAAGAACATGAATCTGGGGTCCTTAAGGAATTGGAAGCCTTTGCCAAATCTTCCAACGTTAAACTACAATTGCCGGCTGTGTTTATTGGAGGCACCTTGTTTGGGGGTTTGGATAAAGTCATGGCTACTCATATTTCTGGGGATTTGGTTCCTATTTTGAAACAGGCCGGCGCTTTGTGGCTTTGA MQQAIPYRSWQSIDTKQTALSIRPPWGGGGSASTTAEGGPGSRSDVTASVSESAAIVFARRGCCMSHVVKRLLLGLGANPAVYEVEEEHESGVLKELEAFAKSSNVKLQLPAVFIGGTLFGGLDKVMATHISGDLVPILKQAGALWL
BLAST of Cla002075 vs. Swiss-Prot
Match: GRXC9_ARATH (Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30 Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = 1
BLAST of Cla002075 vs. Swiss-Prot
Match: GRXS9_ORYSJ (Monothiol glutaredoxin-S9 OS=Oryza sativa subsp. japonica GN=GRXS9 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 3.9e-27 Identity = 72/151 (47.68%), Postives = 88/151 (58.28%), Query Frame = 1
BLAST of Cla002075 vs. Swiss-Prot
Match: GRXS5_ORYSJ (Monothiol glutaredoxin-S5 OS=Oryza sativa subsp. japonica GN=GRXS5 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 3.3e-26 Identity = 72/156 (46.15%), Postives = 87/156 (55.77%), Query Frame = 1
BLAST of Cla002075 vs. Swiss-Prot
Match: GRXS3_ORYSJ (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.3e-24 Identity = 59/134 (44.03%), Postives = 75/134 (55.97%), Query Frame = 1
BLAST of Cla002075 vs. Swiss-Prot
Match: GRS13_ARATH (Monothiol glutaredoxin-S13 OS=Arabidopsis thaliana GN=GRXS13 PE=2 SV=2) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22 Identity = 61/134 (45.52%), Postives = 78/134 (58.21%), Query Frame = 1
BLAST of Cla002075 vs. TrEMBL
Match: U3RBI7_CUCSA (Glutaredoxin OS=Cucumis sativus GN=GRX6 PE=2 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 8.1e-64 Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 1
BLAST of Cla002075 vs. TrEMBL
Match: A0A0A0LT46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G412500 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.4e-52 Identity = 111/130 (85.38%), Postives = 116/130 (89.23%), Query Frame = 1
BLAST of Cla002075 vs. TrEMBL
Match: A0A0D2NFU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G198800 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-37 Identity = 90/149 (60.40%), Postives = 103/149 (69.13%), Query Frame = 1
BLAST of Cla002075 vs. TrEMBL
Match: C6T0K0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G119200 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.7e-37 Identity = 97/173 (56.07%), Postives = 110/173 (63.58%), Query Frame = 1
BLAST of Cla002075 vs. TrEMBL
Match: A0A0B2NRN2_GLYSO (Glutaredoxin-C9 OS=Glycine soja GN=glysoja_037278 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.7e-37 Identity = 97/173 (56.07%), Postives = 110/173 (63.58%), Query Frame = 1
BLAST of Cla002075 vs. NCBI nr
Match: gi|659111862|ref|XP_008455946.1| (PREDICTED: glutaredoxin-C9-like [Cucumis melo]) HSP 1 Score: 257.3 bits (656), Expect = 1.6e-65 Identity = 132/149 (88.59%), Postives = 137/149 (91.95%), Query Frame = 1
BLAST of Cla002075 vs. NCBI nr
Match: gi|564112188|ref|NP_001274138.1| (glutaredoxin-C9-like [Cucumis sativus]) HSP 1 Score: 251.1 bits (640), Expect = 1.2e-63 Identity = 130/151 (86.09%), Postives = 135/151 (89.40%), Query Frame = 1
BLAST of Cla002075 vs. NCBI nr
Match: gi|700208087|gb|KGN63206.1| (hypothetical protein Csa_2G412500 [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 3.5e-52 Identity = 111/130 (85.38%), Postives = 116/130 (89.23%), Query Frame = 1
BLAST of Cla002075 vs. NCBI nr
Match: gi|823159646|ref|XP_012479656.1| (PREDICTED: glutaredoxin-C9 [Gossypium raimondii]) HSP 1 Score: 164.5 bits (415), Expect = 1.4e-37 Identity = 90/149 (60.40%), Postives = 103/149 (69.13%), Query Frame = 1
BLAST of Cla002075 vs. NCBI nr
Match: gi|351727693|ref|NP_001235378.1| (uncharacterized protein LOC100306716 [Glycine max]) HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37 Identity = 97/173 (56.07%), Postives = 110/173 (63.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
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