Cla001639 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCCTCAATCATCGCACTAGTTAAAAATGAAAAACTAACCGGTGAAAACTACGCAACGTTAAAATCTAACCTGAATGTGATTCTAGTTATAGATGATCTACAGTTTGTCTTAACGGAGAAGTGTCCTCCTATCCCTGTTTATAATGCATCCCAATTTGTTAGGGATGCATATGATTGTTGGACAAAGGCCAATGACAAAACCCGAGTCTATATCTTGGCGAGTTTGTCTGACGTACTCAACAAGAAACATGAGGCCATGATGAATGCACGACAGATCATGGAGTCCCTCCAGGAAATGTTTGGACAACCGTTCTCATAG ATGTCTTCCTCAATCATCGCACTAGTTAAAAATGAAAAACTAACCGGTGAAAACTACGCAACGTTAAAATCTAACCTGAATGTGATTCTAGTTATAGATGATCTACAGTTTGTCTTAACGGAGAAGTGTCCTCCTATCCCTGTTTATAATGCATCCCAATTTGTTAGGGATGCATATGATTGTTGGACAAAGGCCAATGACAAAACCCGAGTCTATATCTTGGCGAGTTTGTCTGACGTACTCAACAAGAAACATGAGGCCATGATGAATGCACGACAGATCATGGAGTCCCTCCAGGAAATGTTTGGACAACCGTTCTCATAG ATGTCTTCCTCAATCATCGCACTAGTTAAAAATGAAAAACTAACCGGTGAAAACTACGCAACGTTAAAATCTAACCTGAATGTGATTCTAGTTATAGATGATCTACAGTTTGTCTTAACGGAGAAGTGTCCTCCTATCCCTGTTTATAATGCATCCCAATTTGTTAGGGATGCATATGATTGTTGGACAAAGGCCAATGACAAAACCCGAGTCTATATCTTGGCGAGTTTGTCTGACGTACTCAACAAGAAACATGAGGCCATGATGAATGCACGACAGATCATGGAGTCCCTCCAGGAAATGTTTGGACAACCGTTCTCATAG MSSSIIALVKNEKLTGENYATLKSNLNVILVIDDLQFVLTEKCPPIPVYNASQFVRDAYDCWTKANDKTRVYILASLSDVLNKKHEAMMNARQIMESLQEMFGQPFS
BLAST of Cla001639 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 5.0e-31 Identity = 66/105 (62.86%), Postives = 87/105 (82.86%), Query Frame = 1
BLAST of Cla001639 vs. TrEMBL
Match: E2GK52_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 6.4e-26 Identity = 58/105 (55.24%), Postives = 82/105 (78.10%), Query Frame = 1
BLAST of Cla001639 vs. TrEMBL
Match: W9SH28_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004989 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 7.1e-25 Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = 1
BLAST of Cla001639 vs. TrEMBL
Match: W9RVT2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006473 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.1e-24 Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 1
BLAST of Cla001639 vs. TrEMBL
Match: W9RMF3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014901 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-24 Identity = 56/105 (53.33%), Postives = 78/105 (74.29%), Query Frame = 1
BLAST of Cla001639 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica]) HSP 1 Score: 141.7 bits (356), Expect = 7.2e-31 Identity = 66/105 (62.86%), Postives = 87/105 (82.86%), Query Frame = 1
BLAST of Cla001639 vs. NCBI nr
Match: gi|659086056|ref|XP_008443743.1| (PREDICTED: uncharacterized protein LOC103487255, partial [Cucumis melo]) HSP 1 Score: 139.4 bits (350), Expect = 3.6e-30 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 1
BLAST of Cla001639 vs. NCBI nr
Match: gi|778697615|ref|XP_011654359.1| (PREDICTED: uncharacterized protein LOC105435361 [Cucumis sativus]) HSP 1 Score: 136.3 bits (342), Expect = 3.0e-29 Identity = 65/105 (61.90%), Postives = 85/105 (80.95%), Query Frame = 1
BLAST of Cla001639 vs. NCBI nr
Match: gi|659072276|ref|XP_008464721.1| (PREDICTED: uncharacterized protein LOC103502537 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 5.4e-26 Identity = 58/102 (56.86%), Postives = 79/102 (77.45%), Query Frame = 1
BLAST of Cla001639 vs. NCBI nr
Match: gi|659113933|ref|XP_008456826.1| (PREDICTED: uncharacterized protein LOC103496664 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 5.4e-26 Identity = 57/104 (54.81%), Postives = 82/104 (78.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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