Cla001627.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla001627
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Pathogenesis related protein-1 (AHRD V1 ***- E5FP99_POPTO); contains Interpro domain(s) IPR001283 Allergen V5/Tpx-1 related
Location	Chr2 : 8360826 .. 8361314 (-)
Sequence length	489

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTACGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCCGTGAAGGCATGGGCGGATGAAAAGAAGTTCTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

mRNA sequence

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTACGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCCGTGAAGGCATGGGCGGATGAAAAGAAGTTCTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

Coding sequence (CDS)

ATGTCGAAAATGGCACTCGCCAACGTTCTCTCCACCATTTGCATGTTTGCGCTAACCCTAACCCCCATCGTCATTGCTCAAAACACCCCTGACGACTTCGTCAACGAGCACAATGCAGTTCGAGCCAAGGTCGGGGCTGAACCCCTCTTTTGGGATGAAGAACTTGCAACTTACGCTAAAAATTACATCACGTCGAAGATTAAAACATGCGAGATGGTGCACTCCAATGGCCCTTACGGAGAGAACTTGGCCACAGTAAACGGCGAGTTGACCGCAGCAGCTGCCGTGAAGGCATGGGCGGATGAAAAGAAGTTCTATGACCACAATTCCAACAAATGTGTGGGGGGCGAGTGTCGACATTATACACAATTGGTGTGGAAGAAAAGTTTCTTGGTGGGTTGTGCTACTGTTAAATGCAAAAACAATTGGTCTTTACTCTCATGCAACTATAGTCCTTCTGGTAATGTTGTAGGTGAGCTACCTTATTAG

Protein sequence

MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY

Homology

[Close]

BLAST of Cla001627 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.5e-45
Identity = 76/137 (55.47%), Postives = 95/137 (69.34%), Query Frame = 1


Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQN+P D++N HNA R +VG  P+ WD  LA YA+NY   +I  C M+HS+GPYGENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKSFLVGCATVKCKNNWSL 145
              +L AA AVK W DEK+FYD+NSN CVGG C HYTQ+VW+ S  +GCA V+  N W  
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFF 142

Query: 146 LSCNYSPSGNVVGELPY 163
           ++CNY P GN +G+ P+
Sbjct: 143 ITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cla001627 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-42
Identity = 81/163 (49.69%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 2   SKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKN 61
           S+M    ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD  +A YA+N
Sbjct: 7   SQMPSFFLVSTLLLF-LIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQN 66

Query: 62  YITSKIKTCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CR 121
           Y++     C +VHS+G YGENLA  +G+ +TAA AV+ W DEK++YDH+SN C  G+ C 
Sbjct: 67  YVSQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCG 126

Query: 122 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQ+VW+ S  VGCA VKC N   ++SCNY P GNV+G+ PY
Sbjct: 127 HYTQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cla001627 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40
Identity = 78/156 (50.00%), Postives = 106/156 (67.95%), Query Frame = 1


Query: 9   VLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIK 68
           ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD+++A YA+NY +    
Sbjct: 14  LVSTLLLF-LVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 73

Query: 69  TCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CRHYTQLVW 128
            C +VHS+G YGENLA  +G+ +TAA AV+ W DEK++YDH+SN C  G+ C HYTQ+VW
Sbjct: 74  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 133

Query: 129 KKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           + S  VGCA V+C N   ++SCNY P GN  GE PY
Sbjct: 134 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cla001627 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-40
Identity = 79/163 (48.47%), Postives = 111/163 (68.10%), Query Frame = 1


Query: 2   SKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKN 61
           S+M+   ++ST+ +F L ++    AQN+  D+++ HN  RA VG EPL WD+++A YA+N
Sbjct: 7   SQMSSFFLVSTLLLF-LIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQN 66

Query: 62  YITSKIKTCEMVHSNGPYGENLATVNGE-LTAAAAVKAWADEKKFYDHNSNKCVGGE-CR 121
           Y +     C +VHS+G YGENLA  +G+ LTAA AV+ W +EK++Y H+SN C  G+ C 
Sbjct: 67  YASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCG 126

Query: 122 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQ+VW+ S  VGCA V+C N   ++SCNY P GNV+G+ PY
Sbjct: 127 HYTQVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Cla001627 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 69/133 (51.88%), Postives = 90/133 (67.67%), Query Frame = 1


Query: 26  AQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKTCEMVHSNGPYGENLAT 85
           AQ   ++F+N HNA R +VG  P+ WD+ LA YA+NY   +   C M+HS+GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 86  VNGELTAAAAVKAWADEKKFYDHNSNKCVGGE-CRHYTQLVWKKSFLVGCATVKCKNNWS 145
              +L AA AVK W DEK++YD+NSN C  G+ C HYTQ+VW+KS  +GCA V+C + W 
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 140

Query: 146 LLSCNYSPSGNVV 158
            ++CNY P GN +
Sbjct: 141 FITCNYDPPGNYI 153

[Close]

BLAST of Cla001627 vs. TrEMBL
Match: A0A0A0K4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 5.2e-72
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 1


Query: 1   MSKMALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYA 60
           MS MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA
Sbjct: 1   MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 60

Query: 61  KNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
           +NY+ SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECR
Sbjct: 61  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 120

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNVVGELPY
Sbjct: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

[Close]

BLAST of Cla001627 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 1


Query: 9   VLSTICMFALT-LTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKI 68
           ++S + M  +T L  I +AQN+  DFVN HNA RAKVG  P+ W+  LA YA+ Y   KI
Sbjct: 8   LISFMMMGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKI 67

Query: 69  KTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWK 128
            TCEM HS GPYGENLA   GE+TA  AV  W  EKK+YDH+SN+C+G ECRHYTQ+VW+
Sbjct: 68  GTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWR 127

Query: 129 KSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
            +  VGCA VKC NNW  + CNY P  N VG+ PY
Sbjct: 128 GTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]

BLAST of Cla001627 vs. TrEMBL
Match: E5FP99_POPTO (Pathogenesis related protein-1 OS=Populus tomentosa PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 88/162 (54.32%), Postives = 115/162 (70.99%), Query Frame = 1


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           +SK +LA  ++ +  FA+T+ P+ +AQ++P D+VN HN  RA+VG   + WD  +A YA 
Sbjct: 3   ISKNSLA--IAFLIAFAITI-PLSLAQDSPQDYVNAHNNARAQVGVGNIVWDTNVAAYAS 62

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NYI      C +VHS GPYGENLA  +G+LT +AAVK W DEK  YD+NSN CVGGECRH
Sbjct: 63  NYIKRLTGDCRLVHSGGPYGENLAGGSGDLTGSAAVKLWVDEKPKYDYNSNSCVGGECRH 122

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQ+VW+ S  +GCA  KC N  +++SCNYSP GN VG+ PY
Sbjct: 123 YTQVVWRNSVRLGCAKAKCSNGGTVISCNYSPPGNYVGQRPY 161

[Close]

BLAST of Cla001627 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.4e-45
Identity = 85/153 (55.56%), Postives = 109/153 (71.24%), Query Frame = 1


Query: 11  STICMFALTL-TPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIKT 70
           STI + +  L T I  AQN+P DFV+ HN +RA VG  P+ WD+ LA YA++Y  SK+ T
Sbjct: 9   STIFLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDT 68

Query: 71  CEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKKS 130
           CEM HSNGPYGENLA    E+T   AV+ WA EKKFY+H+ N+CVG EC HYTQ+VW+ +
Sbjct: 69  CEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECGHYTQIVWRHT 128

Query: 131 FLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
             +GC  VKC+NNW  + CNY+P GN +G+ PY
Sbjct: 129 TNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 161

[Close]

BLAST of Cla001627 vs. TrEMBL
Match: A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 9.3e-45
Identity = 90/171 (52.63%), Postives = 112/171 (65.50%), Query Frame = 1


Query: 4   MALANVLSTICMFALTLTPIV----------IAQNTPDDFVNEHNAVRAKVGAEPLFWDE 63
           M  AN+LST+C+  LTLT  +          +A+++P ++++ HNAVRA VG EPL W+ 
Sbjct: 1   MGFANILSTLCLLGLTLTLTLTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNS 60

Query: 64  ELATYAKNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKC 123
            LA YA+NY  +KI TC+M HS GPYGENLA  N  +TA  AV  WADEKK YD+NSN C
Sbjct: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120

Query: 124 VG--GECRHYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
                 C HYTQLVW  +  VGCA VKC+NNW  L C+Y P GN  G+ PY
Sbjct: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]

BLAST of Cla001627 vs. NCBI nr
Match: gi|659110135|ref|XP_008455067.1| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-72
Identity = 122/162 (75.31%), Postives = 146/162 (90.12%), Query Frame = 1


Query: 1   MSKMALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAK 60
           MSKMAL+N+ S+IC+  LTL P+++A NTP ++V+ HNAVRA+VG +P+FWDEELA YA+
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRH 120
           NY+ SK+ TCEMVHSNGPYGENLAT++G LTAAAAV+AWADEKK+YDHNSN CVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           YTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNV GELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

[Close]

BLAST of Cla001627 vs. NCBI nr
Match: gi|778724761|ref|XP_004137082.2| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 7.5e-72
Identity = 126/163 (77.30%), Postives = 147/163 (90.18%), Query Frame = 1


Query: 1   MSKMALANVLSTICMFALTLT-PIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYA 60
           MS MAL+N  S+IC+  LTLT P+++A NTP ++V+ HNAVRA+VGA+P+FWDEELA YA
Sbjct: 1   MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 60

Query: 61  KNYITSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECR 120
           +NY+ SKI TCEMVHSNG YGENLAT++G LTAAAAVKAWADEKK+YDHNSNKCVGGECR
Sbjct: 61  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 120

Query: 121 HYTQLVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           HYTQLVWK SFL+GCA +KCKNNWSL+SCNYSP+GNVVGELPY
Sbjct: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

[Close]

BLAST of Cla001627 vs. NCBI nr
Match: gi|449438610|ref|XP_004137081.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 6.4e-71
Identity = 129/159 (81.13%), Postives = 137/159 (86.16%), Query Frame = 1


Query: 4   MALANVLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYI 63
           MALA  LS +C+ AL LTPIVIAQN+P DF + HNAVRAKVGAEPLFWDEEL  YAKNYI
Sbjct: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60

Query: 64  TSKIKTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQ 123
           TSKIKTCEMVH  GPYGENLAT N  LTAAA+V  WA EKK+Y+HNSNKC GGECRHY Q
Sbjct: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120

Query: 124 LVWKKSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           LVWK SFLVGCATVKCKNNWSL+SCNYSPSGNVVGE PY
Sbjct: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 159

[Close]

BLAST of Cla001627 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 7.6e-48
Identity = 89/154 (57.79%), Postives = 108/154 (70.13%), Query Frame = 1


Query: 9   VLSTICMFALTLTPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKIK 68
           ++S + M  +TL PI +AQN+  DFVN HN  RAKVG  P+ W+  LA YA+ Y   KI 
Sbjct: 8   LISFMMMGLITLAPITLAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTYANKKIG 67

Query: 69  TCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWKK 128
           TCEM HS GPYGENLA   GE+TA  AV  W  EKK+YDH+SN+C+G ECRHYTQ+VW+ 
Sbjct: 68  TCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRG 127

Query: 129 SFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
           +  VGCA VKC NNW  + CNY P GN VG+ PY
Sbjct: 128 TKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

[Close]

BLAST of Cla001627 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 89/155 (57.42%), Postives = 112/155 (72.26%), Query Frame = 1


Query: 9   VLSTICMFALTL-TPIVIAQNTPDDFVNEHNAVRAKVGAEPLFWDEELATYAKNYITSKI 68
           +LSTIC+ +  L T I  AQN+P DFV+ HN +RA VG  P+ WD+ LA YA++Y  SKI
Sbjct: 8   ILSTICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKI 67

Query: 69  KTCEMVHSNGPYGENLATVNGELTAAAAVKAWADEKKFYDHNSNKCVGGECRHYTQLVWK 128
            TCEM HSNGPYGENLA    E+T   AVK WA EKKFY+H+ N+CVG EC HYTQ+VW+
Sbjct: 68  DTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWR 127

Query: 129 KSFLVGCATVKCKNNWSLLSCNYSPSGNVVGELPY 163
            +  +GC  VKC+NNW  + CNY+P GN +G+ PY
Sbjct: 128 HTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

The following BLAST results are available for this feature:

BLAST of Cla001627 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	3.5e-45	55.47	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1B_TOBAC	8.1e-42	49.69	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]
PR1A_TOBAC	1.2e-40	50.00	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1C_TOBAC	1.5e-40	48.47	Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3	[more]
PR1A_SOLLC	1.1e-38	51.88	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of Cla001627 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4C6_CUCSA	5.2e-72	77.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1	[more]
A0A0A0K4C1_CUCSA	1.4e-45	56.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]
E5FP99_POPTO	1.4e-45	54.32	Pathogenesis related protein-1 OS=Populus tomentosa PE=2 SV=1	[more]
A0A0A0K6A0_CUCSA	5.4e-45	55.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1	[more]
A0A0A0K7N5_CUCSA	9.3e-45	52.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1	[more]

BLAST of Cla001627 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110135\|ref\|XP_008455067.1\|	2.6e-72	75.31	PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo]	[more]
gi\|778724761\|ref\|XP_004137082.2\|	7.5e-72	77.30	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|449438610\|ref\|XP_004137081.1\|	6.4e-71	81.13	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110143\|ref\|XP_008455071.1\|	7.6e-48	57.79	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|659110137\|ref\|XP_008455068.1\|	1.3e-47	57.42	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla001627	Cla001627	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla001627	Cla001627.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla001627.1.cds1	Cla001627.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 49..67 score: 1.4E-15coord: 145..158 score: 1.4E-15coord: 118..134 score: 1.4E-15coord: 95..108 score: 1.4
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 4..162 score: 4.1
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 22..162 score: 5.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 35..150 score: 1.4
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 28..158 score: 2.8
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 20..162 score: 1.19
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 145..156 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 4..162 score: 4.1