Cla015242 (gene) Watermelon (97103) v1

NameCla015242
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr9 : 3242637 .. 3245073 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTTTTATTTTCCCATGTTGCTATTTGTTATGGGAAGCACTAGAAAGAGAGCTTCATATCTTAAAACATCTGAAATTGTGTCAAATTCATGTCAGTCTATGCAACTAACGAATAGGCATATTTTCACCTTTTTAATAGCTCTATAGTCCTCTTTAGTAGGTTACCACTTACCAGATTGATATTTAGTTACTTTATACCATTTGAATTGTATGGCCTTTGTTGGTTGCAGTTCATTTCTATGGGAAAAATAAAACTGGGGAAGAAAAATTTCCTATCAAGACTGATCATGACACCTTGAGGGAGGGCTACCGGTATGAGCCCACTATTCTTTTTATGACAGTTATAATAAAGTTCCCCATGTTTGCAGTACGTGTTATGCCAGATTAGTGGTGTTTTCAGTAGAAATAAACTAGGTTGTAGTCATACTGATAGTGGCTTAGAAATAATTATTTATTATGGACATTGTAAAGTTGATGAAATACTGTGAAAATGTCAACTGTAGATGATAAGTGGATTATTTTTGGAAGATGCATTTTGCCTCATCATAGGATGTCCATTACTTTGGCTTACACAATGTGGATGTCTTACTCTATGCATTGATTAACTTTCTTCTACAATAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGACAAAAAAATTTTTTTTTTTTTTTTTTTAAGGTTCATTCGTTCTGAAGAAGATGATATGGATACATCATGGGAGCAGAAGCTGGTGAAGCGATATTATGATAAGCTTTTCAAAGAGTATCCTATGTATAATCTAATGCCATATTTTTTGGGCTTTAGCTGTTTGTTATATTGATTAGATAAAACTTAAATTTGGTTTTTATCTTTGATTTCTATTTGTCAATTTGGTTGTTGAACTCTTGAAGTTTGATTTTAGTCATTGAACTTTTTTCCTTTTTTTTTTTTTTTTTTTAAATTTAGTTCATTAATATTTAAAATATCAACTTTAGTCTTCAAACTTTTTTTTAAGAGCTGATGTTTAGTCTCTATTGTGTGTGTGTGTGGGGGATAGAGGACTAAAAATGAGATTTTAAAATTTAAATGACCAAAACAAATAGTGGGTAGAAAGTGAATAACCAAAATCAAAATTTAAAAGTCTAGGGGCCAAACTACCAGAGACTAGATAATAGTTTAAAGACAAAAACTACATTGAAATCCAAATAAATTACAGTGTGCCTTAGAACTACTTATAGCAGTTAAGGTTTTCTTTACGTGTAACCATCGAATAATTTTTTTGAATGTGTGTTTCTTGCTGTTAGAGAAGCTAGAACAGTTTAATTCGATTCCCCATTTAGTTACTTTTTTTAAGCATATGTGCAATGCTTCTGATTGCAAGAACAAAATTAATAATTTTTTATGCTTATGTGAGAGAAAATCAGATATTGTTGCCTTAAATTCATTGAAGATACTGCATAGCTGATATGACACAATACAAAAGTGGGAAGGTGAGCTATGAAGTCATTACTTCACTTTTATTTTCGGTTTCTTACTGAAATTGTCACTTGAAATTCAAACTACTAATAAAATTTTTCCTTATAGATTGGTCTCAGGTGGCGTACGGAGAAGGAAGTAATATCTGGGAAAGGTACAATTTTTTTTTTTTTTTTTTTTTAATTTTTTCTTTTTTTTTTTTAATTCAAACTACTAATAAAATTTTTCCTTATAGATTGGTCTCAGGTGGCGTACGGAGAAGGAAGTAATATCTGGGAAAGGTACAATTTTTTTTTTTTTTTTTTAATGTCCATTCTTTAGTTTCTGCCATCTTTTCTTTCTCCCCCCCTCCATTATTGCTAGTTGACTGTACAGTTAGTTGCCTTTTGATGATATCACCTTTTCATTTATTATCTACTTTAGTTTGAATTTCTGTTGCTCTGGCTAATTGACTGCGTGGTTAGGACTAGGAGCCTTCTTATAATAATTATTCCGCTTCTTTAAGTATCTTTTTCATTTTCTTTTTATTTTTGGATATTGGAACTACCTCCTCATTTTAAATGTGCATATTAGAAGTGTGTACGCTCTATCTTGCTTTCATAATTTATCTATTGACATTGTATAGTTGAAAAGTACCAATTTCCTGTAGGCTGTGATCTTTATCTTTTTCGTTGGAATTTATGCTTGAGCTTTTGCTTGACCACTTCTTCTTCTGTCAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAGGGTGGTTTAGCAAGCTATGAGGTAGTATTAATGTATATTTACATACCAGCTAAGCTACAACTAATTTACTACTTTCACATATCGGGTATAGGAACATATTAATTGGGACTTTGGCTGTTAACTGGGTACTGCTTTTATATTGAAAGACATAGGAAGACTTTTGTCTTCTGATTAAACTTTGAAGGGTTATTTGAGGGCAATCAGAGCAGAGTAG

mRNA sequence

ATGGCTATCTTTTATTTTCCCATGTTGCTATTTGTTATGGGAAGCACTAGAAAGAGAGCTTCATATCTTAAAACATCTGAAATTGTGTCAAATTCATGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAGGGTGGTTTAGCAAGCTATGAGGGTTATTTGAGGGCAATCAGAGCAGAGTAG

Coding sequence (CDS)

ATGGCTATCTTTTATTTTCCCATGTTGCTATTTGTTATGGGAAGCACTAGAAAGAGAGCTTCATATCTTAAAACATCTGAAATTGTGTCAAATTCATGGCAGTTCATATGCGGTAACAAGCATTGTGATGAGAAGGGTGGTTTAGCAAGCTATGAGGGTTATTTGAGGGCAATCAGAGCAGAGTAG

Protein sequence

MAIFYFPMLLFVMGSTRKRASYLKTSEIVSNSWQFICGNKHCDEKGGLASYEGYLRAIRAE
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU08522watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU65995watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015242Cla015242.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU08522WMU08522transcribed_cluster
WMU65995WMU65995transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla015242Cucumber (Gy14) v2cgybwmB177
Cla015242Cucumber (Gy14) v2cgybwmB516
Cla015242Melon (DHL92) v3.6.1medwmB182
Cla015242Melon (DHL92) v3.6.1medwmB338
Cla015242Melon (DHL92) v3.6.1medwmB389
Cla015242Silver-seed gourdcarwmB0344
Cla015242Silver-seed gourdcarwmB0345
Cla015242Silver-seed gourdcarwmB0448
Cla015242Silver-seed gourdcarwmB0514
Cla015242Silver-seed gourdcarwmB0758
Cla015242Silver-seed gourdcarwmB0917
Cla015242Cucumber (Chinese Long) v3cucwmB197
Cla015242Cucumber (Chinese Long) v3cucwmB577
Cla015242Watermelon (97103) v2wmwmbB010
Cla015242Watermelon (97103) v2wmwmbB019
Cla015242Watermelon (97103) v2wmwmbB041
Cla015242Wax gourdwgowmB001
Cla015242Wax gourdwgowmB355
Cla015242Wax gourdwgowmB583
Cla015242Wax gourdwgowmB587
Cla015242Watermelon (97103) v1wmwmB006
Cla015242Watermelon (97103) v1wmwmB030
Cla015242Cucumber (Gy14) v1cgywmB213
Cla015242Cucurbita maxima (Rimu)cmawmB222
Cla015242Cucurbita maxima (Rimu)cmawmB328
Cla015242Cucurbita maxima (Rimu)cmawmB332
Cla015242Cucurbita maxima (Rimu)cmawmB414
Cla015242Cucurbita maxima (Rimu)cmawmB849
Cla015242Cucurbita moschata (Rifu)cmowmB209
Cla015242Cucurbita moschata (Rifu)cmowmB322
Cla015242Cucurbita moschata (Rifu)cmowmB326
Cla015242Cucurbita moschata (Rifu)cmowmB539
Cla015242Cucurbita moschata (Rifu)cmowmB838
Cla015242Wild cucumber (PI 183967)cpiwmB188
Cla015242Wild cucumber (PI 183967)cpiwmB571
Cla015242Melon (DHL92) v3.5.1mewmB186
Cla015242Melon (DHL92) v3.5.1mewmB397
Cla015242Watermelon (Charleston Gray)wcgwmB007
Cla015242Watermelon (Charleston Gray)wcgwmB046
Cla015242Cucumber (Chinese Long) v2cuwmB186
Cla015242Cucumber (Chinese Long) v2cuwmB554
Cla015242Cucurbita pepo (Zucchini)cpewmB131
Cla015242Cucurbita pepo (Zucchini)cpewmB136
Cla015242Cucurbita pepo (Zucchini)cpewmB318
Cla015242Cucurbita pepo (Zucchini)cpewmB535
Cla015242Bottle gourd (USVL1VR-Ls)lsiwmB047
Cla015242Bottle gourd (USVL1VR-Ls)lsiwmB171
Cla015242Bottle gourd (USVL1VR-Ls)lsiwmB232