Bhi01M000337 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTAATTTTCAGCCACACAAACAAAAAATTCATCCTGCTACATGTCACATTCTTATTGGTTGCAGATCATCAACCATTCCACCTCAGCACTCTGTTGCCAACAAACACAGAGCCCTCAAGCTAAGCCTTGTCATCCCCTCCATTCAATCATATCCCTACCAAAAAAACAATCAAATTGGCATGAACCCTTTACTTGTTATGGTTGTTGAAGCTCTCTCATCAATTTTCTGAGCTTCAGAAAGTTGCCATGGAGGCCCTTAATGCAGCAAGTTTAAGCCCCTTGGCTGTTCTTTCCGACAGAAAAAGAGAACCCAGAAAAATCTCCCCAATCCCATCTTCTTCCTCATTCAAGTTGCCAAATCTTGCTAGTTTTACCACAAATTTACCAGTCCCACAAGGGTTTTGTTCATCAAGAAGCTTACAAGGAAGTCTACTGCTCTTATCTTCGTTATTCAATGCTGGGGTTTCTGGAGCTCTTACATATGAGGAAGCTCTCCAACAATCTGTGAGCACTTCCTCATCTGGGGATTTAGATTTAAATGGGGTTCTTGATGGGATTATAAATTTTGGAACAGAGAATCCTGGAATCGTTGTTGGTGGTGTTTCCATTTTGGCTCTCCCTTTGATTTTCTCTCTTTTTCTTGGAAAATCTAAGCCATGGGGTGTTGAATCTGCTAAAAGTGCTTATGCAAAATTGGGTGAGGATTCTAATGCTCAGCTACTTGATATTAGATCGCCAGTTGAATTAAGGAAAGTGGGTGGCCCTGATCTTAAGGGCTTGGGTAAAAAACCTGTGTCCATTACTTACAATGGTGAAGATAAGCCAGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATTTTAGACAAGTAAGACTTTGCATTTGTTAACTTAGTCTTAGTTTAGAGCCTTGTTTGATGGTTTGTTAGAGTTAACTATTTAAACTACCAATCATGTATTTCCTTGTGATGGGTGTTAACTGAAAAGGCAACGACAAGTCTAATGGATACCCTCAAGCCATATCACTAATTTGAAGATAAGAATTGGTTTTTTTAGTTCACAAATCAATCAGGATGCATTTACCTGCACGCCAAACCGATAGGGAAATATATTGGTTGGTTAGTGAAAACAAGAATGTAGATCAATGAACTACATTTAGCAAATGTAAGGATCTTTTGTGATCTATGGAAGATTGAAACCATGTGGTTAGTCCAGAATCATAGTTACTCTGTAAGCATATGTATGAAAATGATCTGTCTACATTTTGTTGGAAGACAGATATGATGGGAATTCCGAACTCGTTGCTGAGTTGGTAACTGTTAATGGATTTAAAGCTGCTTTTGCTATTAATGATGGTGCAGAAGGACCTCGTGGATGGACGGTTATCACCATTCTTCTTAGTTTCCATATTTTCATTCAAAGATATCTTTGAGTATATTTAGGAGGTTCTTACTTGGATCTGTGTCTTGTGCAGAATAGTGGTCTTCCATGGTTAACACCGAAGTCAACTTTGAGTCTTAGCAGTCTAACAGATGCCATTGCTGGCGCATTTGGAGTATGCATTTCTATTTCAATTTATTTACTTATACCTTTTTTTACATACCAATGCTTAAATTGATAGGAAACAATAAGAGCCGATTACGATGAATTTCTCATGGCTCTAAACAGCACATTTAGGTGGGGAAAATGTATGTAGATATAGAAAGCAGCCATCATTCTGAAATATCATAATTACAATGAAAAGCATGATTGTTGTAGCAAATGTATTCCATATCTTGATAATATTCTTCATCTTCTTTGCTCAAAAGTGTCCTAAAAAGCATGAAATGAGCAAATTCTTGATTGAAATTTCTGTAGGAGGATTCTGAAGGTCTGCCTGCTGTTGCTACTGCTGTTGCTGCAGCAGCTACTGGAGTAGGTTTATTGGCTTTTACTGAGGTGGGCTCATATCCTTTGCCTATGAAATTGCAACAGAGAATCAATAATAACAAGTCTTAAATTACTTCTTTCAACAGATGGAGACGGTTCTCCAACTTCTGGGTTCAGCTGCAATCATTCAGTTTGTGAGCAGAAAACTCCTATATGCAGAGGTGAGTTGGATGTTTGTATCCTAATGCTGCTTTCACCACTAAGACGGCTTAGAAAGAGGATGTCAATCCTTTTCAAAGAACAAGAACTAGCCAGATGACAGTCAAAATTTTCCAAGATGTGTGCATCCTTTAGTTCTTCACCACTAAAATTAGACATCGAATGCATAATTCGAGACAGCATCATCATGTAGTTAATGTTATAATGTGATGACTATGTAGCCTTATACATTTTTCTACATCGTCTACTTTATATTGCCTACCTCTTGTGGGAAGTCGCTCTTTTATTCGAATTTCAGACGATAATACATCGTGCTATAACCTCACTGCCATTTCATTATGTGACATCGGAATTGGTTACTTAAGTATGATTGACCTCAATCCATTGGCAATAGGATCGGAAGAAAACTTTACAAGAAGTTGACGAGTTCTTAAACACCAAGGTCGCCCCACAAGAGCTCGTTGATGAGTTGAAGGTGCTTGATACTTAAGTTTTTTAAGTTCATTCTTTTAATCTGCCTACTTATAAATCTCAACATTGCTGCTACAGTTACAATCTCATAATCCCATCCGTTTTACAATCAAACTATCTATGAATTTCAGGACATTGGAAAGGCTCTATTACCATTACCTGCTACTGGCAAGGCACTTCCTGCACCAGCAGAGGTAGCTGTGGAGGCTGCAACATCCAGTGACACTGTACAGAAAGCAGAAGCTGTTGCAGAGCCTGCTCCCGAGATAAATTCGGTTGCCAAACAAGAAGTAAAGGCAGAATCATTGCCTAAAATCTCGCGGCCGCTTTCTCCATATCCTTCTGTAATTCTCATGTCCATGAGTATTTCTTTTCTTTGCTCTTTTCTTCCCAAGCTTCTAGTTGTAGATTGCATCTCATAAAAGTGGAAAAACTTGTCAACTTCCTAGATCAGCTTGGTCCATATGGCCATCTACATAAAGGCTTCCAACAAAACATCTTCTTGGAGGTGTTAGAGGCTAGGAATGGAGTTAGACATCTTTTAGGAGGTGTTAGAGGCTAGGAATGGAGTTGTGAACTTATGGAACCGATAGTGTAAAGAGTTAATAAGACATAAAATTGATGTTTTTTTTAGTCGTGGGGTTCACGAACGTCAAGCACCTCCTTATAGTTCGGCTTTAGCACGTAGGAGTAACTCAAGCCATGTTTTCTTTTACTCAAAACTCGAAGTTTGATGATATTCTTGACATCAAACATTATGGTTCTAATCTAAGACCAAAATGGGTGCTTTAATACTTAACTCTTGGCCGTAGGCACAAGAGTTATTTGTTGTCTGTCAATGACATTCATGATACATATATACTACCTCTAAATCTCCATGTTTTTATCTCTGGTTGCAGTATCCCGATTTCAGGCCTCCAACGTCTCCTACGCCATCACAGCCGTAATGGCAGAGTAATTTAGCTGGGAATTGCAGAGTCTATATTAGTGAGTTATGGTGGGTGAGCTCCATATTTTTTAGTGTTGAAAGAAGGTGTGGATGACAGACTGAGTCCGTGCTCTTAATCTCACCAAAAAGTATGCTGCTTTTTGCTTTGCTTTTCCTACTATAAGTCAAATGAAATTGTAGTTATTTGCTGAGTGTCTCTCAACATTGACCTCAAACTTTTCTAGTGAAGATTGAATTTTCCAAATCCAAAAACTCATACTTTTTCACCTTCACTAAAGAAACCAAAATGGGGAACAGATGTATGACATGAATCACTAGGAATTGATAGTTGGAATTTAATCAAGTGGTAATTGTATAAGAACATGGTTTCTGCCTAACTTTGAAGGGGGCCATGATTTCTTTCTTTTTTTCTTTTTAAATTCTTTTCCCTCAGGTTTTGAAATGTTCAAAACAACTGGAATCATTCATATAGAATAATGAGTGTCTTTTGCTTGGAGAGCTGGTTGTTGAGCATATCTGCTTGAGTTGAAGTCTTCTTCTGTGAGTTTAATGTTGAAATTAAATAAATCCATACCCAG CTCTAATTTTCAGCCACACAAACAAAAAATTCATCCTGCTACATGTCACATTCTTATTGGTTGCAGATCATCAACCATTCCACCTCAGCACTCTGTTGCCAACAAACACAGAGCCCTCAAGCTAAGCCTTGTCATCCCCTCCATTCAATCATATCCCTACCAAAAAAACAATCAAATTGGCATGAACCCTTTACTTGTTATGGTTGTTGAAGCTCTCTCATCAATTTTCTGAGCTTCAGAAAGTTGCCATGGAGGCCCTTAATGCAGCAAGTTTAAGCCCCTTGGCTGTTCTTTCCGACAGAAAAAGAGAACCCAGAAAAATCTCCCCAATCCCATCTTCTTCCTCATTCAAGTTGCCAAATCTTGCTAGTTTTACCACAAATTTACCAGTCCCACAAGGGTTTTGTTCATCAAGAAGCTTACAAGGAAGTCTACTGCTCTTATCTTCGTTATTCAATGCTGGGGTTTCTGGAGCTCTTACATATGAGGAAGCTCTCCAACAATCTGTGAGCACTTCCTCATCTGGGGATTTAGATTTAAATGGGGTTCTTGATGGGATTATAAATTTTGGAACAGAGAATCCTGGAATCGTTGTTGGTGGTGTTTCCATTTTGGCTCTCCCTTTGATTTTCTCTCTTTTTCTTGGAAAATCTAAGCCATGGGGTGTTGAATCTGCTAAAAGTGCTTATGCAAAATTGGGTGAGGATTCTAATGCTCAGCTACTTGATATTAGATCGCCAGTTGAATTAAGGAAAGTGGGTGGCCCTGATCTTAAGGGCTTGGGTAAAAAACCTGTGTCCATTACTTACAATGGTGAAGATAAGCCAGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATTTTAGACAAATATGATGGGAATTCCGAACTCGTTGCTGAGTTGGTAACTGTTAATGGATTTAAAGCTGCTTTTGCTATTAATGATGGTGCAGAAGGACCTCGTGGATGGACGAATAGTGGTCTTCCATGGTTAACACCGAAGTCAACTTTGAGTCTTAGCAGTCTAACAGATGCCATTGCTGGCGCATTTGGAGAGGATTCTGAAGGTCTGCCTGCTGTTGCTACTGCTGTTGCTGCAGCAGCTACTGGAGTAGGTTTATTGGCTTTTACTGAGATGGAGACGGTTCTCCAACTTCTGGGTTCAGCTGCAATCATTCAGTTTGTGAGCAGAAAACTCCTATATGCAGAGGATCGGAAGAAAACTTTACAAGAAGTTGACGAGTTCTTAAACACCAAGGTCGCCCCACAAGAGCTCGTTGATGAGTTGAAGGACATTGGAAAGGCTCTATTACCATTACCTGCTACTGGCAAGGCACTTCCTGCACCAGCAGAGGTAGCTGTGGAGGCTGCAACATCCAGTGACACTGTACAGAAAGCAGAAGCTGTTGCAGAGCCTGCTCCCGAGATAAATTCGGTTGCCAAACAAGAAGTAAAGGCAGAATCATTGCCTAAAATCTCGCGGCCGCTTTCTCCATATCCTTCTTATCCCGATTTCAGGCCTCCAACGTCTCCTACGCCATCACAGCCGTAATGGCAGAGTAATTTAGCTGGGAATTGCAGAGTCTATATTAGTGAGTTATGGTGGGTGAGCTCCATATTTTTTAGTGTTGAAAGAAGGTGTGGATGACAGACTGAGTCCGTGCTCTTAATCTCACCAAAAAGTATGCTGCTTTTTGCTTTGCTTTTCCTACTATAAGTCAAATGAAATTGTAGTTATTTGCTGAGTGTCTCTCAACATTGACCTCAAACTTTTCTAGTGAAGATTGAATTTTCCAAATCCAAAAACTCATACTTTTTCACCTTCACTAAAGAAACCAAAATGGGGAACAGATGTATGACATGAATCACTAGGAATTGATAGTTGGAATTTAATCAAGTGGTAATTGTATAAGAACATGGTTTCTGCCTAACTTTGAAGGGGGCCATGATTTCTTTCTTTTTTTCTTTTTAAATTCTTTTCCCTCAGGTTTTGAAATGTTCAAAACAACTGGAATCATTCATATAGAATAATGAGTGTCTTTTGCTTGGAGAGCTGGTTGTTGAGCATATCTGCTTGAGTTGAAGTCTTCTTCTGTGAGTTTAATGTTGAAATTAAATAAATCCATACCCAG ATGGAGGCCCTTAATGCAGCAAGTTTAAGCCCCTTGGCTGTTCTTTCCGACAGAAAAAGAGAACCCAGAAAAATCTCCCCAATCCCATCTTCTTCCTCATTCAAGTTGCCAAATCTTGCTAGTTTTACCACAAATTTACCAGTCCCACAAGGGTTTTGTTCATCAAGAAGCTTACAAGGAAGTCTACTGCTCTTATCTTCGTTATTCAATGCTGGGGTTTCTGGAGCTCTTACATATGAGGAAGCTCTCCAACAATCTGTGAGCACTTCCTCATCTGGGGATTTAGATTTAAATGGGGTTCTTGATGGGATTATAAATTTTGGAACAGAGAATCCTGGAATCGTTGTTGGTGGTGTTTCCATTTTGGCTCTCCCTTTGATTTTCTCTCTTTTTCTTGGAAAATCTAAGCCATGGGGTGTTGAATCTGCTAAAAGTGCTTATGCAAAATTGGGTGAGGATTCTAATGCTCAGCTACTTGATATTAGATCGCCAGTTGAATTAAGGAAAGTGGGTGGCCCTGATCTTAAGGGCTTGGGTAAAAAACCTGTGTCCATTACTTACAATGGTGAAGATAAGCCAGGTTTCTTGAAGAAGCTTGCTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATTTTAGACAAATATGATGGGAATTCCGAACTCGTTGCTGAGTTGGTAACTGTTAATGGATTTAAAGCTGCTTTTGCTATTAATGATGGTGCAGAAGGACCTCGTGGATGGACGAATAGTGGTCTTCCATGGTTAACACCGAAGTCAACTTTGAGTCTTAGCAGTCTAACAGATGCCATTGCTGGCGCATTTGGAGAGGATTCTGAAGGTCTGCCTGCTGTTGCTACTGCTGTTGCTGCAGCAGCTACTGGAGTAGGTTTATTGGCTTTTACTGAGATGGAGACGGTTCTCCAACTTCTGGGTTCAGCTGCAATCATTCAGTTTGTGAGCAGAAAACTCCTATATGCAGAGGATCGGAAGAAAACTTTACAAGAAGTTGACGAGTTCTTAAACACCAAGGTCGCCCCACAAGAGCTCGTTGATGAGTTGAAGGACATTGGAAAGGCTCTATTACCATTACCTGCTACTGGCAAGGCACTTCCTGCACCAGCAGAGGTAGCTGTGGAGGCTGCAACATCCAGTGACACTGTACAGAAAGCAGAAGCTGTTGCAGAGCCTGCTCCCGAGATAAATTCGGTTGCCAAACAAGAAGTAAAGGCAGAATCATTGCCTAAAATCTCGCGGCCGCTTTCTCCATATCCTTCTTATCCCGATTTCAGGCCTCCAACGTCTCCTACGCCATCACAGCCGTAA MEALNAASLSPLAVLSDRKREPRKISPIPSSSSFKLPNLASFTTNLPVPQGFCSSRSLQGSLLLLSSLFNAGVSGALTYEEALQQSVSTSSSGDLDLNGVLDGIINFGTENPGIVVGGVSILALPLIFSLFLGKSKPWGVESAKSAYAKLGEDSNAQLLDIRSPVELRKVGGPDLKGLGKKPVSITYNGEDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELVTVNGFKAAFAINDGAEGPRGWTNSGLPWLTPKSTLSLSSLTDAIAGAFGEDSEGLPAVATAVAAAATGVGLLAFTEMETVLQLLGSAAIIQFVSRKLLYAEDRKKTLQEVDEFLNTKVAPQELVDELKDIGKALLPLPATGKALPAPAEVAVEAATSSDTVQKAEAVAEPAPEINSVAKQEVKAESLPKISRPLSPYPSYPDFRPPTSPTPSQP
BLAST of Bhi01M000337 vs. TAIR10
Match: AT4G01050.1 (thylakoid rhodanese-like) HSP 1 Score: 416.8 bits (1070), Expect = 1.7e-116 Identity = 279/479 (58.25%), Postives = 339/479 (70.77%), Query Frame = 0
BLAST of Bhi01M000337 vs. TAIR10
Match: AT3G25480.1 (Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 113.2 bits (282), Expect = 4.0e-25 Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of Bhi01M000337 vs. Swiss-Prot
Match: sp|Q9M158|STR4_ARATH (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4 PE=1 SV=2) HSP 1 Score: 416.8 bits (1070), Expect = 3.1e-115 Identity = 279/479 (58.25%), Postives = 339/479 (70.77%), Query Frame = 0
BLAST of Bhi01M000337 vs. Swiss-Prot
Match: sp|Q6ETQ7|TROL_ORYSJ (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TROL PE=1 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 9.3e-80 Identity = 164/282 (58.16%), Postives = 207/282 (73.40%), Query Frame = 0
BLAST of Bhi01M000337 vs. Swiss-Prot
Match: sp|A2X345|TROL_ORYSI (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=TROL PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 1.6e-79 Identity = 163/282 (57.80%), Postives = 207/282 (73.40%), Query Frame = 0
BLAST of Bhi01M000337 vs. Swiss-Prot
Match: sp|Q56XR7|STR4A_ARATH (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4A PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 7.2e-24 Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 0
BLAST of Bhi01M000337 vs. TrEMBL
Match: tr|A0A0A0L8L6|A0A0A0L8L6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119690 PE=4 SV=1) HSP 1 Score: 714.5 bits (1843), Expect = 1.4e-202 Identity = 406/442 (91.86%), Postives = 419/442 (94.80%), Query Frame = 0
BLAST of Bhi01M000337 vs. TrEMBL
Match: tr|A0A1S3AUS3|A0A1S3AUS3_CUCME (rhodanese-like domain-containing protein 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483198 PE=4 SV=1) HSP 1 Score: 709.1 bits (1829), Expect = 6.0e-201 Identity = 408/442 (92.31%), Postives = 420/442 (95.02%), Query Frame = 0
BLAST of Bhi01M000337 vs. TrEMBL
Match: tr|A0A059C001|A0A059C001_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_E00068 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.1e-137 Identity = 281/459 (61.22%), Postives = 343/459 (74.73%), Query Frame = 0
BLAST of Bhi01M000337 vs. TrEMBL
Match: tr|A0A1U8AKG7|A0A1U8AKG7_NELNU (rhodanese-like domain-containing protein 4, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104603976 PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 1.4e-136 Identity = 278/461 (60.30%), Postives = 334/461 (72.45%), Query Frame = 0
BLAST of Bhi01M000337 vs. TrEMBL
Match: tr|A0A2P4KQ01|A0A2P4KQ01_QUESU (Rhodanese-like domain-containing protein 4, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_15124 PE=4 SV=1) HSP 1 Score: 494.6 bits (1272), Expect = 2.3e-136 Identity = 259/389 (66.58%), Postives = 318/389 (81.75%), Query Frame = 0
BLAST of Bhi01M000337 vs. NCBI nr
Match: XP_011650694.1 (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Cucumis sativus] >KGN56436.1 hypothetical protein Csa_3G119690 [Cucumis sativus]) HSP 1 Score: 714.5 bits (1843), Expect = 2.2e-202 Identity = 406/442 (91.86%), Postives = 419/442 (94.80%), Query Frame = 0
BLAST of Bhi01M000337 vs. NCBI nr
Match: XP_008437912.1 (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Cucumis melo]) HSP 1 Score: 709.1 bits (1829), Expect = 9.1e-201 Identity = 408/442 (92.31%), Postives = 420/442 (95.02%), Query Frame = 0
BLAST of Bhi01M000337 vs. NCBI nr
Match: XP_022924264.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita moschata]) HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191 Identity = 399/454 (87.89%), Postives = 416/454 (91.63%), Query Frame = 0
BLAST of Bhi01M000337 vs. NCBI nr
Match: XP_023527607.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 652.9 bits (1683), Expect = 7.8e-184 Identity = 388/454 (85.46%), Postives = 403/454 (88.77%), Query Frame = 0
BLAST of Bhi01M000337 vs. NCBI nr
Match: XP_022979639.1 (rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 652.5 bits (1682), Expect = 1.0e-183 Identity = 388/454 (85.46%), Postives = 404/454 (88.99%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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