Bhi04M001147 (mRNA) Wax gourd

NameBhi04M001147
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 36399932 .. 36401292 (-)
Sequence length1361
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCAATTTGAATAGATATATACAATTACTTTCATAAAACTTCTTTGGTTTACACACCAAATCGGTATTAGAGCGAGAATGATCTGATTCTAATGACAGGGAAGAAACCAACAAACAACAAGAATCTCGAGGCCTCGGACAAAGAAGCAGCTTCATCTGCTGCCCTATCACCAAGGGCTTCGACGAGACATGTGCAGTCCATTGAAGCATCCATTGGTGGTATTCATCGACTCCTGGAAAGAATGTCAATCCAGATGGAAGAGATAGCAGAGAGTGTGGCATTGGGTCAACAACTAAGAGAGCAAGGTAAACCAAGAAACAATAATCAACGGCAAGAATGAAAGAATATGAATGGTACAGAATCATCCAAGAAACATTCAAGAATTACCAATAACCATTCAGGAAAGACCAAGAATACAAGCTTTTCATCAAAGACGACAACAAAATAGTGATTCATTAAGCGAAGATGAAGAGAAGAATAATATTTAGATGGGGCGTTGAAGAGCAGGGGCTCATCATTAGCAACAACACCCACCGACAGGGGAAATGAACAAGTATAGAGTCAAATTGGACATTTCAACCTTCAGTGGTAAGAGAGATATCAAAGTGTTCTTGGAGTGGATAAAAAATGTTGAAGGGTTTTTCAAGTATGCCAATACTCCCTACCATAAGAAGGTTCAATTAGTGGCTCTCAAGTTCCGCAGGGGAGCTTCGGCTTGGTGGGAACAACGGGAAGTAAACCGATTTCGAAGCGAGAAAAAAATCCATTACTAGTTGGGAAAAACAAAAAAGAATGATGAAAGAAAGGTTTTTGCCAAATAACTATGAACAGATCCTCTACAATTAGTACCAAAACCTTAGACAAGGAACGAGGACAATAACAGAATACACCAAAGATTTTCATTGCTTAGGGGCTAGAACCAATCTATCCGATAGTGAATTGAAGGAACTGTTAAAGGTTCGGAGTGGAAGCGAGAATCCAACCCAAATCCCAATTTTTACAGAAAAAGAATTTTACAGAAAAATACAGTAATATTATGCATTTAAATTAATTACAACATGCTTATTAAGAAATTGAGAAAAGAGAGATAAAGATCACTCTTGAAGATCTAATCTTCTCGTAATTCCTTCTCCAAAATGACCACGAACTTGAAACTTTAATTTGGCCACCACTTGTATTATCTAGGATGAGAATCCAAAAAGTTGTGGGCTCTAGTATTTTGGAAGAAGGAGATAGAGTTTGTGAGAGGAGGAGGGTTGTGCTAGGAACTTTTCTCGGATGTTTTTTTTTTGTTTTTTGTTTTTTTTGTTTTGTTTTTTTCTCTGAAAGTCTCAAGGACAAAATGAATGAAGAAAAAAAAC

mRNA sequence

ATCAATTTGAATAGATATATACAATTACTTTCATAAAACTTCTTTGGTTTACACACCAAATCGGTATTAGAGCGAGAATGATCTGATTCTAATGACAGGGAAGAAACCAACAAACAACAAGAATCTCGAGGCCTCGGACAAAGAAGCAGCTTCATCTGCTGCCCTATCACCAAGGGCTTCGACGAGACATGTGCAGTCCATTGAAGCATCCATTGGTGGTATTCATCGACTCCTGGAAAGAATGTCAATCCAGATGGAAGAGATAGCAGAGAGTGTGGCATTGGGTCAACAACTAAGAGAGCAAGGTAAACCAAGAAACAATAATCAACGGCAAGAATGAAAGAATATGAATGGTACAGAATCATCCAAGAAACATTCAAGAATTACCAATAACCATTCAGGAAAGACCAAGAATACAAGCTTTTCATCAAAGACGACAACAAAATAGTGATTCATTAAGCGAAGATGAAGAGAAGAATAATATTTAGATGGGGCGTTGAAGAGCAGGGGCTCATCATTAGCAACAACACCCACCGACAGGGGAAATGAACAAGTATAGAGTCAAATTGGACATTTCAACCTTCAGTGGTAAGAGAGATATCAAAGTGTTCTTGGAGTGGATAAAAAATGTTGAAGGGTTTTTCAAGTATGCCAATACTCCCTACCATAAGAAGGTTCAATTAGTGGCTCTCAAGTTCCGCAGGGGAGCTTCGGCTTGGTGGGAACAACGGGAAGTAAACCGATTTCGAAGCGAGAAAAAAATCCATTACTAGTTGGGAAAAACAAAAAAGAATGATGAAAGAAAGGTTTTTGCCAAATAACTATGAACAGATCCTCTACAATTAGTACCAAAACCTTAGACAAGGAACGAGGACAATAACAGAATACACCAAAGATTTTCATTGCTTAGGGGCTAGAACCAATCTATCCGATAGTGAATTGAAGGAACTGTTAAAGGTTCGGAGTGGAAGCGAGAATCCAACCCAAATCCCAATTTTTACAGAAAAAGAATTTTACAGAAAAATACAGTAATATTATGCATTTAAATTAATTACAACATGCTTATTAAGAAATTGAGAAAAGAGAGATAAAGATCACTCTTGAAGATCTAATCTTCTCGTAATTCCTTCTCCAAAATGACCACGAACTTGAAACTTTAATTTGGCCACCACTTGTATTATCTAGGATGAGAATCCAAAAAGTTGTGGGCTCTAGTATTTTGGAAGAAGGAGATAGAGTTTGTGAGAGGAGGAGGGTTGTGCTAGGAACTTTTCTCGGATGTTTTTTTTTTGTTTTTTGTTTTTTTTGTTTTGTTTTTTTCTCTGAAAGTCTCAAGGACAAAATGAATGAAGAAAAAAAAC

Coding sequence (CDS)

ATGACAGGGAAGAAACCAACAAACAACAAGAATCTCGAGGCCTCGGACAAAGAAGCAGCTTCATCTGCTGCCCTATCACCAAGGGCTTCGACGAGACATGTGCAGTCCATTGAAGCATCCATTGGTGGTATTCATCGACTCCTGGAAAGAATGTCAATCCAGATGGAAGAGATAGCAGAGAGTGTGGCATTGGGTCAACAACTAAGAGAGCAAGGTAAACCAAGAAACAATAATCAACGGCAAGAATGA

Protein sequence

MTGKKPTNNKNLEASDKEAASSAALSPRASTRHVQSIEASIGGIHRLLERMSIQMEEIAESVALGQQLREQGKPRNNNQRQE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi04G001147Bhi04G001147gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M001147.utr3p1Bhi04M001147.utr3p1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi04M001147cds.Bhi04M001147CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M001147.exon1Bhi04M001147.exon1exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M001147.utr5p1Bhi04M001147.utr5p1five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi04M001147Bhi04M001147-proteinpolypeptide


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35