Bhi07M000937 (mRNA) Wax gourd

NameBhi07M000937
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionReverse transcriptase
Locationchr7 : 35344811 .. 35345163 (-)
Sequence length353
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAGAAGAAATTGGATCGAAGGGATTTTATGATGCAGGGGTTTGGAAAGAAAAAGAGGAGGATGTAACTAAGTTGATCTCTAACTATTTCAAATCTATTTTCCAAACCTGTAATCCAAGCTCTGAGGAGATTAATAGAATTTTGAAGGGGGTCCCAAGGAGGGTCTCAGATAAAGAGAATCAAGAGTTGATCAAACTATTTACAAGGGGTGAGATCGAAGCGATTATTAAAACTATGAACCCGTTAAAAGCTCATGGCCTTGATAGAGCCTATGCAATGTTTTTTCAAACATATTGGGACAATGTTGATGATGAAACAATGAATATTTGTCTTAGTGTTCTCAATGAGGGG

mRNA sequence

GGAAAGAAGAAATTGGATCGAAGGGATTTTATGATGCAGGGGTTTGGAAAGAAAAAGAGGAGGATGTAACTAAGTTGATCTCTAACTATTTCAAATCTATTTTCCAAACCTGTAATCCAAGCTCTGAGGAGATTAATAGAATTTTGAAGGGGGTCCCAAGGAGGGTCTCAGATAAAGAGAATCAAGAGTTGATCAAACTATTTACAAGGGGTGAGATCGAAGCGATTATTAAAACTATGAACCCGTTAAAAGCTCATGGCCTTGATAGAGCCTATGCAATGTTTTTTCAAACATATTGGGACAATGTTGATGATGAAACAATGAATATTTGTCTTAGTGTTCTCAATGAGGGG

Coding sequence (CDS)

GGAAAGAAGAAATTGGATCGAAGGGATTTTATGATGCAGGGGTTTGGAAAGAAAAAGAGGAGGATGTAACTAAGTTGATCTCTAACTATTTCAAATCTATTTTCCAAACCTGTAATCCAAGCTCTGAGGAGATTAATAGAATTTTGAAGGGGGTCCCAAGGAGGGTCTCAGATAAAGAGAATCAAGAGTTGATCAAACTATTTACAAGGGGTGAGATCGAAGCGATTATTAAAACTATGAACCCGTTAAAAGCTCATGGCCTTGATAGAGCCTATGCAATGTTTTTTCAAACATATTGGGACAATGTTGATGATGAAACAATGAATATTTGTCTTAGTGTTCTCAATGAGGGG

Protein sequence

KEEIGSKGFYDAGVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRGEIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG
BLAST of Bhi07M000937 vs. TrEMBL
Match: tr|A0A2N9GPZ7|A0A2N9GPZ7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.7e-14
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 0

Query: 13  GVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRGEI 72
           GVW+ ++  + ++  +YF+ IF + NPS+E I  +L+G+   V++  N +L   FT+ E+
Sbjct: 249 GVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDEV 308

Query: 73  EAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
              +K M P KA G D   A+F+QTYWD V  E     LS+L+ G
Sbjct: 309 SLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSG 353

BLAST of Bhi07M000937 vs. TrEMBL
Match: tr|A0A2N9IPS8|A0A2N9IPS8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.7e-14
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 0

Query: 13  GVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRGEI 72
           GVW+ ++  + ++  +YF+ IF + NPS+E I  +L+G+   V++  N +L   FT+ E+
Sbjct: 824 GVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDEV 883

Query: 73  EAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
              +K M P KA G D   A+F+QTYWD V  E     LS+L+ G
Sbjct: 884 SLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSG 928

BLAST of Bhi07M000937 vs. TrEMBL
Match: tr|A0A2N9HPU0|A0A2N9HPU0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44029 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-13
Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = 0

Query: 11  DAGVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRG 70
           D GVW+E++ +VT LI  +F+SIF+T  P  E I   +  VP  +S + N  L   FT  
Sbjct: 396 DQGVWREEKSEVTGLIMQHFESIFRTSIP--ENIEEAVAHVPNLISQEVNTSLTSEFTAR 455

Query: 71  EIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
           E+E  +K M PLKA G D    +FFQTYW  V  E     LS LN G
Sbjct: 456 EVELALKQMAPLKAPGPDGMPPLFFQTYWKVVGPEVTQGVLSCLNSG 500

BLAST of Bhi07M000937 vs. TrEMBL
Match: tr|A0A2N9G552|A0A2N9G552_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25688 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.5e-13
Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 0

Query: 11  DAGVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRG 70
           DAGVW+ ++  + K+  NYF++IF +  P+ E +N  L+G+   V+D+ N  L+K FT  
Sbjct: 218 DAGVWQTEKSRMAKIAVNYFQNIFTSIRPTEESVNSCLEGMEGLVTDEMNTALLKDFTEK 277

Query: 71  EIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETM 108
           E+   +K M P KA G D   A+F+QTYW+ V  E +
Sbjct: 278 EVTQALKQMYPTKAPGPDGMSAIFYQTYWEVVGPEVL 314

BLAST of Bhi07M000937 vs. TrEMBL
Match: tr|A0A2N9ES30|A0A2N9ES30_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5362 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12
Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 0

Query: 11  DAGVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRG 70
           D GVW+E++ + T LI  +F+SIF+T  P  E I   +  VP  +S + N  LI  FT  
Sbjct: 732 DQGVWREEKSEFTGLIMQHFESIFRTSIP--ENIEEAVAHVPNLISQEVNTFLISEFTAQ 791

Query: 71  EIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
           E+E  +K M PLKA G D    +FFQ YW  V  E     LS LN G
Sbjct: 792 EVELALKQMAPLKAPGPDGMPPLFFQKYWKLVGPEVTQGVLSCLNSG 836

BLAST of Bhi07M000937 vs. NCBI nr
Match: XP_024044510.1 (uncharacterized protein LOC112100177 [Citrus clementina])

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 0

Query: 13  GVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRGEI 72
           GVW E  E V +L  +YF +IF T +PS  ++N  L+ VP +VS + N +L +LFT+ EI
Sbjct: 241 GVWTEDAEVVERLFGDYFTNIFTTSSPSPTQLNAALEAVPVKVSGEMNNQLDQLFTKEEI 300

Query: 73  EAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
              +  M P KA GLD   A FFQ +W +V++  ++ CL +LNEG
Sbjct: 301 AEALAQMCPTKAPGLDGLPAAFFQKHWSSVNEGVVSTCLHILNEG 345

BLAST of Bhi07M000937 vs. NCBI nr
Match: XP_023874626.1 (uncharacterized protein LOC111987155 [Quercus suber])

HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13
Identity = 40/107 (37.38%), Postives = 66/107 (61.68%), Query Frame = 0

Query: 11  DAGVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRG 70
           D GVW E +E + ++I +YF +IF++ NPSS   ++ L  +  RVS++ N +L+ +F   
Sbjct: 182 DQGVWVEDQEGIDRIILDYFSTIFKSGNPSS--FDKSLSAISSRVSEEMNGDLLAVFKAE 241

Query: 71  EIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
           E+   ++ M+P KA G D    +F+Q YW+ VD + +   L+VLN G
Sbjct: 242 EVRVALQQMHPTKAPGPDGMSPIFYQKYWEIVDPDVIECVLAVLNSG 286

BLAST of Bhi07M000937 vs. NCBI nr
Match: XP_023901742.1 (uncharacterized protein LOC112013579 [Quercus suber])

HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13
Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 0

Query: 6   SKGFYDAGVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIK 65
           S+ + + G+W + +E ++    +YF++I+ + +P+   IN ++  +PRRV+D+ N EL K
Sbjct: 218 SRLWNEDGIWCDSKESISATALSYFENIYTSSSPTG--INEVINAIPRRVTDEMNSELSK 277

Query: 66  LFTRGEIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLN 116
            FT  E+   +K ++P KA G D   A FF  YWD V     N+ L+VLN
Sbjct: 278 TFTSEEVLKALKQLHPTKAPGPDGMSATFFHNYWDIVGPSITNMVLNVLN 325

BLAST of Bhi07M000937 vs. NCBI nr
Match: XP_023896927.1 (uncharacterized protein LOC112008817 [Quercus suber])

HSP 1 Score: 83.6 bits (205), Expect = 5.0e-13
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 0

Query: 8   GFYDA-GVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKL 67
           G  DA G W E EE + +++++Y+ ++F T NP+  E++ +L GV  RVSD  N EL+K 
Sbjct: 344 GLEDAQGEWMEGEEKIGEMLTSYYSNLFATVNPT--ELDTVLSGVQPRVSDSMNTELLKP 403

Query: 68  FTRGEIEAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLNEG 118
           F   E+   +K M P  A G D    +F++ +WD V  E     LS+LN G
Sbjct: 404 FRMEEVHTALKQMKPGTAPGPDGLPPLFYKNFWDKVGGEVSEAVLSMLNSG 452

BLAST of Bhi07M000937 vs. NCBI nr
Match: XP_023912601.1 (uncharacterized protein LOC112024185 [Quercus suber])

HSP 1 Score: 83.2 bits (204), Expect = 6.5e-13
Identity = 39/103 (37.86%), Postives = 62/103 (60.19%), Query Frame = 0

Query: 13  GVWKEKEEDVTKLISNYFKSIFQTCNPSSEEINRILKGVPRRVSDKENQELIKLFTRGEI 72
           G+W + +E +T    +YF++I+ + +P+   IN ++  +PRRV+D+ N EL K FT  E+
Sbjct: 157 GIWCDSKESITATALSYFENIYTSSSPTG--INEVINAIPRRVTDEMNSELTKTFTSEEV 216

Query: 73  EAIIKTMNPLKAHGLDRAYAMFFQTYWDNVDDETMNICLSVLN 116
              +K ++P KA   D   A+FF  YWD V     N+ L+VLN
Sbjct: 217 LKALKQLHPTKAPRPDGMSAIFFHNYWDIVGPSITNMVLNVLN 257

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A2N9GPZ7|A0A2N9GPZ7_FAGSY8.7e-1438.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1[more]
tr|A0A2N9IPS8|A0A2N9IPS8_FAGSY8.7e-1438.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1[more]
tr|A0A2N9HPU0|A0A2N9HPU0_FAGSY1.1e-1343.93Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44029 PE=4 SV=1[more]
tr|A0A2N9G552|A0A2N9G552_FAGSY2.5e-1340.21Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25688 PE=4 SV=1[more]
tr|A0A2N9ES30|A0A2N9ES30_FAGSY1.3e-1242.99Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5362 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_024044510.12.2e-1643.81uncharacterized protein LOC112100177 [Citrus clementina][more]
XP_023874626.12.2e-1337.38uncharacterized protein LOC111987155 [Quercus suber][more]
XP_023901742.13.8e-1336.36uncharacterized protein LOC112013579 [Quercus suber][more]
XP_023896927.15.0e-1338.74uncharacterized protein LOC112008817 [Quercus suber][more]
XP_023912601.16.5e-1337.86uncharacterized protein LOC112024185 [Quercus suber][more]

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi07G000937Bhi07G000937gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi07M000937cds.Bhi07M000937CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi07M000937.exon1Bhi07M000937.exon1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi07M000937Bhi07M000937-proteinpolypeptide