Bhi07G000919 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000919
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Proteasome subunit alpha type-5
Location	chr7 : 34931417 .. 34933457 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACATAGACAGGTATGAATGTAATTGATATTGTTTGGATACTATTGATAAGCATGAATGTTATGTGAATTAAGCAATTTTGAGGTATGATGCCATTTGCTTGTGACTGATATGTTTTCAGGTATGTAACATGATGTATAATGTGAATGTTATTGATGCTACAAAGTATGCCATGATTGTAAAGTGTTGGTTTGTCCTCCTAACACCATGATGTTATAGCTTTATGGGCCGATGGGTTCACCATTATTTTACAGCTTTATGGTTCACCATTATTTTATAGCTTCATGGACCGACAGGTTCACAATCATATTACAACTCCATTTTAGGATGGGTTAAACCGTTCACTAGACAACCATCTAAGGTTGGTTAGTTTTATGAGAGTCCCACCTAGCATGTTTGCATTTATTGGACATAAATACATAGCCTGACCCCAGTAATGGGGTTACGTACTGAGTTTTATACTCACTCTTTCTTATGTTATGTTTTTAGGTAAAGGCAAGGATAAGTTGGCAAACGACACGAGGAATCCGTGAGTTATGCCATTGGGACTTGTTTTCAATGCTTCCGCTTAAATTTCATGTTTTCCTATCATTTAATGTTTTGGGATTGGATCTTGATGTTGGACAGCATATTCTGATCTTTTTTTTTTTTTTAATATGGACGTTTTTAGGGAACCTCGATAAAATAATTTTCGTTTGTTTTAAATTTCTCGTTAGATAAACAGTTTCGATTTTTTCATATTGGTTTTTTTTACATATATATAAACTTATGCACTATGGTCATATATGTTACGATTTCAACTTTGTATGTCATGAGCTGATGGCCCTAGTAGAGTCCTTTAGAAGTTAGGTCGTTGCACGTTGACGTCTGGTCTTTTACCATTATTGGGTTAGAGCTTGCACATGGCCATGCTCCTTTCTCAAGATACCCTTGGATGAAGGTGCATTATTGTTCATCATATTGGGGCTTAGGCACAATTTTATGTTCTACAAATAGATTTATGTAACTTTTGTTTAGGAATCAAGTAGCATGGAAAAACTCATGGTAACTCATGAACTTATAGGATGTACAATGAATTAACTAATTGTTGATGCTCACACACTTGTTGAACATGCTTGAGTTGCATTTATAGTTATATTTCAAAGACAAACTGTTGAATTTTCAACTTCATATTCTGTAGAACCATCGGGTGAGCCAATGACTGTGCAATCTACAACACAAGCACTTTGTGATTTAATCCTAAGATTTGAAGAGGGTAATGAGGAGTCTATGATTCTAATACAACCTTTTTCTATTCATGTTACTCTATGTCTTCTCATGTTTTAGTTAAATTTATCTAAATTTTCTTTGAAATGACGATGACTTAACAATGTTTATTTTGTTATTAAGCATCCATTTAAAATATAACCTTCATATGTATTATTTGATTAGGGAATTATTTCATGCTTACTCTTTACAGATGTAGAAAATAATGTGAACTGACTTTTTTATGTTATTGACAGGAATTTTTTTTTCTCTTTAGTTGCTAACTAAAGGTCGCTCTTATTGTGATAGGGAAATAATAAACCTGCTCGTAAAGTGAAATAGTCAAAAGATTGTTGGACTGCTGCTTTTAAAATCACAGGAAGAGATATTGGATTAGTGTTGTTGTTTCAGCAATCTAGTGTTATTGAAAGGTAAGAAACTAACATTTTGAACATAATGTGAGAATTTGTGCGTATGTTTATCCTGCACTTGCTTTCCCCTCTTAGAAACATCGTGTTTTTTAATAGAACTTGGTAAACTATATTGATGAGCCTTCAATTAAAAAATTTATATTAGTATGGTTTGTATTCTTTAAAGATGTCTTGGTTTTCTCTTTAGTTTTTACCTAGTTTTAATTTCTAGCTTGTTATTAAGTAATCCAAAGCCATTTTTAATTGTAGGCAATCTCTTGGAGACACTCTACAGAATGGAAATGAATTTATTATACCCTATAGACAGAAAGCTATGGACAATCCTTATGTTTATGCTATAGTAGATGGTGCGTATTATGGATGA

mRNA sequence

ACAACATAGACAGGTAAAGGCAAGGATAAGTTGGCAAACGACACGAGGAATCCAACCATCGGGTGAGCCAATGACTGTGCAATCTACAACACAAGCACTTTGTGATTTAATCCTAAGATTTGAAGAGGGAAGAGATATTGGATTAGTGTTGTTGTTTCAGCAATCTAGTGTTATTGAAAGGCAATCTCTTGGAGACACTCTACAGAATGGAAATGAATTTATTATACCCTATAGACAGAAAGCTATGGACAATCCTTATGTTTATGCTATAGTAGATGGTGCGTATTATGGATGA

Coding sequence (CDS)

ACAACATAGACAGGTAAAGGCAAGGATAAGTTGGCAAACGACACGAGGAATCCAACCATCGGGTGAGCCAATGACTGTGCAATCTACAACACAAGCACTTTGTGATTTAATCCTAAGATTTGAAGAGGGAAGAGATATTGGATTAGTGTTGTTGTTTCAGCAATCTAGTGTTATTGAAAGGCAATCTCTTGGAGACACTCTACAGAATGGAAATGAATTTATTATACCCTATAGACAGAAAGCTATGGACAATCCTTATGTTTATGCTATAGTAGATGGTGCGTATTATGGATGA

Protein sequence

QHRQVKARISWQTTRGIQPSGEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVIERQSLGDTLQNGNEFIIPYRQKAMDNPYVYAIVDGAYYG

Homology

[Close]

BLAST of Bhi07G000919 vs. Swiss-Prot
Match: sp|O81149|PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana OX=3702 GN=PAE1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.1e-04
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 21  GEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVI 59
           GEPMTV+STTQALCDL LRF EG +  +   F  S +I
Sbjct: 104 GEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLI 141

[Close]

BLAST of Bhi07G000919 vs. Swiss-Prot
Match: sp|Q42134|PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana OX=3702 GN=PAE2 PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 3.1e-04
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 21  GEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVI 59
           GEPMTV+STTQALCDL LRF EG +  +   F  S +I
Sbjct: 104 GEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLI 141

[Close]

BLAST of Bhi07G000919 vs. Swiss-Prot
Match: sp|Q9M4T8|PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max OX=3847 GN=PAE1 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.3e-04
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 21  GEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVI 59
           GEPMTV+STTQALCDL LRF EG +  +   F  S +I
Sbjct: 104 GEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLI 141

[Close]

BLAST of Bhi07G000919 vs. Swiss-Prot
Match: sp|Q9LSU1|PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica OX=39947 GN=PAE1 PE=2 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 9.1e-04
Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 21  GEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVI 59
           GEPMTV+STTQA+CDL LRF EG +  +   F  S +I
Sbjct: 104 GEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLI 141

[Close]

BLAST of Bhi07G000919 vs. TAIR10
Match: AT1G53850.1 (20S proteasome alpha subunit E1)

HSP 1 Score: 45.8 bits (107), Expect = 1.7e-05
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 21  GEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVI 59
           GEPMTV+STTQALCDL LRF EG +  +   F  S +I
Sbjct: 104 GEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLI 141

[Close]

BLAST of Bhi07G000919 vs. TAIR10
Match: AT3G14290.1 (20S proteasome alpha subunit E2)

HSP 1 Score: 45.8 bits (107), Expect = 1.7e-05
Identity = 23/38 (60.53%), Postives = 27/38 (71.05%), Query Frame = 0


Query: 21  GEPMTVQSTTQALCDLILRFEEGRDIGLVLLFQQSSVI 59
           GEPMTV+STTQALCDL LRF EG +  +   F  S +I
Sbjct: 104 GEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLI 141

The following BLAST results are available for this feature:

BLAST of Bhi07G000919 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81149\|PSA5A_ARATH	3.1e-04	60.53	Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana OX=3702 GN=PAE1 PE=1 S...	[more]
sp\|Q42134\|PSA5B_ARATH	3.1e-04	60.53	Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana OX=3702 GN=PAE2 PE=1 S...	[more]
sp\|Q9M4T8\|PSA5_SOYBN	5.3e-04	60.53	Proteasome subunit alpha type-5 OS=Glycine max OX=3847 GN=PAE1 PE=2 SV=1	[more]
sp\|Q9LSU1\|PSA5_ORYSJ	9.1e-04	57.89	Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica OX=39947 GN=PAE1...	[more]

BLAST of Bhi07G000919 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53850.1	1.7e-05	60.53	20S proteasome alpha subunit E1	[more]
AT3G14290.1	1.7e-05	60.53	20S proteasome alpha subunit E2	[more]

BLAST of Bhi07G000919 vs. TrEMBL


Match Name	E-value	Identity	Description

BLAST of Bhi07G000919 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000919	Bhi07M000919	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000919	Cucumber (Gy14) v1	cgywgoB565
Bhi07G000919	Cucumber (Gy14) v2	cgybwgoB478
Bhi07G000919	Cucumber (Gy14) v2	cgybwgoB480
Bhi07G000919	Cucurbita maxima (Rimu)	cmawgoB0892
Bhi07G000919	Cucurbita maxima (Rimu)	cmawgoB0905
Bhi07G000919	Cucurbita moschata (Rifu)	cmowgoB0891
Bhi07G000919	Cucurbita moschata (Rifu)	cmowgoB0905
Bhi07G000919	Cucurbita pepo (Zucchini)	cpewgoB0556
Bhi07G000919	Cucurbita pepo (Zucchini)	cpewgoB0570
Bhi07G000919	Wild cucumber (PI 183967)	cpiwgoB507
Bhi07G000919	Wild cucumber (PI 183967)	cpiwgoB510
Bhi07G000919	Cucumber (Chinese Long) v3	cucwgoB514
Bhi07G000919	Cucumber (Chinese Long) v3	cucwgoB516
Bhi07G000919	Cucumber (Chinese Long) v2	cuwgoB502
Bhi07G000919	Cucumber (Chinese Long) v2	cuwgoB504
Bhi07G000919	Bottle gourd (USVL1VR-Ls)	lsiwgoB382
Bhi07G000919	Melon (DHL92) v3.6.1	medwgoB072
Bhi07G000919	Melon (DHL92) v3.5.1	mewgoB074
Bhi07G000919	Watermelon (Charleston Gray)	wcgwgoB320
Bhi07G000919	Watermelon (97103) v2	wgowmbB527
Bhi07G000919	Watermelon (97103) v1	wgowmB563
Bhi07G000919	Silver-seed gourd	carwgoB0981
Bhi07G000919	Silver-seed gourd	carwgoB0984