Bhi04M000981 (mRNA) Wax gourd

Overview
NameBhi04M000981
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionDNA polymerase delta subunit 4
Locationchr4 : 30127845 .. 30131802 (-)
Sequence length339
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTCTTTTTCTTTTGTGCTAATCAATGATGCTTGCTTCCATGTTATTATGAGGAACGTATACTCCGGGGCTACTAGGAATAATTGTCCATGGATAAGTGATCTTTGGGTTTGGTATTTGCTTGTTCTGAAACGTGCACGTGCTTTTAAAGGTGAAATTGTTTCTGTAAGTATAGACAACCACACCCTTTCTTTGTAAGTATTGGTTTTTTTTTTTTTTTTTTATGAAATTGAAAGTATAGAAACTATAAGACAATATGTGGATCAAAATTTTGTTATTTTGGATTTCAATACAAATATTGAGAATAGAGACGATCACTGATGATGTTGCTCGTGAATGCAAAAACTAAATGTACTAAACTATTTTAGAGTAAGGTTCTTTTGGAAACTAGTTGAATTAGAACTTTTTAGCTAACTCATTTAAGCAATAATGAAATGATTTTGAGTGAAGTTTTTCATTTATTAGGTTCAAGTTTGATGTGTAAGGCTTTTGATTCTTGGGGATTTGGAAGGAAGATATGAAGATTGCATTGGACATATTTTAAGAAGGTTGAAAAGTGGAGAAGGTGCACCCAACACAAAAAGGATTTCATAACAACATTAATAACAAGTACAAGGTAATATTTATAAGATGCTTATCTTAAAAGTCTATTTGTTCTAAAGTCTTGGATTAGATTTAGTGTTGGAATGCTATGACTATCCTTCCGTTAATTGCGCTCGTGTATATTCACTTCAATCTTCATTGCCATTGCTAGTTTATTCATGTGTTCTCCGGTCGTTTTCGGTTGGTTTCCGTCAGCATGTGGGCTTTCTTGGAGTGTTCTTTGTTCTCTCCATACATTTTTCATTACTCTCTCAGATCAGAGGTTTGAAAGTTTTTCTCCTCGTACGTTCATTCTAGATCTATTCATGTTTTACTTGCTTTTTTTCTCTGTTAGATTATGGGAAGATTTTGTCACAATTTGATGTTAGTAGTGATGCAGTTACCCCATGATGCCAATCACAAAGAAGAGGCTCTTCCTCAACATTTGTGCCTTGCAAAATAAAAGAGAACATGAAATCCTCATATGAGGTCAGAGAAAGAATGGAATTCCTATTTATACTTATCTCTGCTAGGGTTGTCAATACTGTTTATAAATATTTATAAATACCCGATTGGAAAGCTGAGGGTACAACCAGTAGGCATTATTGTATTTGCTGCTGTCATGGCTACACTAGGTATGTCTTGTTTTGTAAACCAGTTTGAAAGTGCATTGATTTTCTCATTCAGTCATTTGAACCATGATCGAGGAGTACGAAAGTCTAGTAATTCTATTGCCTATCTACCTCATATTCCTGCTAGAAATGAAGGCCCCTTTCTCAATTATAACAAGTGAAAATATTGACATCCACTATTGATGGTTATTACATCGATGTCTTGTAATTAGCAAAGACCATGTCTTTCAATTTTCTATTCATATTTGTATTCTAGGATCTTTAATTGTTGGATCAACTTGGTTACGTCAAAATTTCATATTACTTTTATTGGTAGCAAAGCATGATTATATATGATTTGGGTTTCTTTAACAATGCGGAGTGGCTAAATCGTTTGGATTTCTTGTTTAGGCTTTCAGGTATTGCTTCAACCAGTAGAAAAACTAATTCAAGATAAACCTTGAAAGTCTATCGTCAGAACAATTCATCTGGTTTTGTGCAATTATGACCTTTGCCACAGTAGTAAAACTTGCCCTCTGCTTATACTACAAAACCTCAAGAAATGATCTTTTGGATTCATTGCTGAGTGAAAACAGGTTTTAAATGATTAATCCGTTGTATACTAATATGAAGAAAGATGGGTTAATTCCTAATGTCTTTACATATAATATACTTTTGAAGGCGCTGTGCAAGAATGATCGTGTTGATGCTGCACACAAGCTATTTGTCGAAATGTCAAGTAAGGGCTGCCTACCTGTCGTGGTTAGCTATACGACTATGGTGTCTTCACTGTGTAAAGCAGATAAGATTGATGATGCTAGAGAGCTAGCGGGAAGATTTAATGCAAATGTCTAGATAGAATCCTTCAGCATAATGCAAATGTTTAGAACTATATGAAACGCTATCGTGCCTAATGGAGATGACATTTAGTTTAATTAGGGCATTTAGTCTTTAATTAATAGTTGGATCTCGTCTACTAATTTATTGTTGGATGTTTAGATTTTGTTATTGCTCCATAGAACTACATGTTGGATTTGTGATATGTTTCCATTTGTTAGGTATTTTATTCATTGTTAACTTTTCTTCAAGTATTTATAGAAAGAGTCTAACTTTAAGGAAGAGTTCTCCTTTCTTTTGCTAACTACTTGTGTTTGTTGGCTTTTGAAATCACTTCTTTCTGTAGATTTTGTGGTTTATTGAGACATTTGTTTAGATCGATGGAACTTAGAACTTTGCTGAGTTTTTGTGTTTTGGCTTTTCTTTTCATTGATAGGAACCGAGTCCATGAATCTAGAGGTAAAAGATTGAATGCCCATGTGACAACTTTTGATAATTGAAGTGAAGTGAATAATCAGATTTGAGTTTTTGTAAAACATTGTTATTTATGTTTGAATGTCTGAAGAAACCTACAAGGAGAGTTTTTGTAAATCATTGTTATACTTTTTGTGACAAATTTTGAGATTTGAAGTACATTGTGAGCTAAATTTGCTTATTGATATATGTGTTCTTGAATATTCATTTTTTTGAGAATTCTGATAGTTTTATTTAGAACAAGTGGTTGTGGAAAATTATTGGGAGTGTGTTTCTTTGAACAGGTTCAAGGTAAATTTTTAGTTTTATTGTGGTAGCATCGTTATGCTACCGAAAATTTTCCATCGTCTTCGTAGCTCATATCTAGGTAACCAAGCTTCTCTTCTTCAAGATCTTGAAAAAGAAGATTCTCTCATCCATTGATATCAACTCTTGAGATCTATCTGTTTTTCTTGGGAAAATATGTTTAAATTGGCTATTTCCTATTTTTTTCCTTCTTGTGTATGAGCTAAGAAAGAAATATTACTAAAATAATGTCATCTTTTGTTGTTTCTTCTTCAATATTTAAGACATCTTTGGAAGAGACATGGAAGGCATTGTCGTCGTTCGCATGTCTCCGCCACACGTGCTGCCAGATTCATTCTACCCTTTACTTTTAATGATGTTGTTTGTGTGTTTTTAGGTGTTTGGAAGAGGCGGGGAGGAGAAGGATTTATTGTAACAACAAGGGATTCACGTAAAAATTGTTCTTGGTAAGTACATTTTTGAATGCTTGCAGTTTTAAGAACAATTAATAAGTTTTTTCAAGTGACTCTAATGATATGAAAATTCCTGTTTGAGAAGTTATAGTGTGTTTAGTTCTCTTTGGACCATATTGGATTAAAATGTAACACCCGTTTATGACTCATGGACGAGAATTGAAACTTCTTACTATATTCCGTTATTGCAAGAATGTATAGATAGGAATTTAGCTGCAGAAGCGGAAATTATCCATGGACATATCGTTAAGTTCACGTATATAGGAAGGATTTGGACCATATAGGAAGGATTATGCATGTTGGAGTGAGAATGTTGTGGGGATACCAGTTACAGTTAAGTTCTACGTTTTGCTATATATCTATTTTAATAATACTTCTTTGCCCAATGTTAGTTTTCTTTTAGTTTTTAGGGTAAAAAAAAGAATCTACATTTTGCTATATATCAATTTTAATAATCTGCATTTTGTTTTCATTTTGAACGTTGAATTTTGTTTTAGATGATTATGGCGCATATGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACTAGAATGGCTCGGTGGGAGCGTGCCTGTAATCTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAA

mRNA sequence

ATGGATTATGGGAAGATTTTGTCACAATTTGATGCGCTGTGCAAGAATGATCGTGTTGATGCTGCACACAAGCTATTTGTCGAAATGTCAAGTGTTTGGAAGAGGCGGGGAGGAGAAGGATTTATTGTAACAACAAGGGATTCACATGATTATGGCGCATATGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACTAGAATGGCTCGGTGGGAGCGTGCCTGTAATCTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAA

Coding sequence (CDS)

ATGGATTATGGGAAGATTTTGTCACAATTTGATGCGCTGTGCAAGAATGATCGTGTTGATGCTGCACACAAGCTATTTGTCGAAATGTCAAGTGTTTGGAAGAGGCGGGGAGGAGAAGGATTTATTGTAACAACAAGGGATTCACATGATTATGGCGCATATGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACTAGAATGGCTCGGTGGGAGCGTGCCTGTAATCTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAA

Protein sequence

MDYGKILSQFDALCKNDRVDAAHKLFVEMSSVWKRRGGEGFIVTTRDSHDYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWDSRV
Homology
[Close]
BLAST of Bhi04M000981 vs. Swiss-Prot
Match: sp|Q3T0X9|DPOD4_BOVIN (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-08
Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 57  MLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKA--GKVQLEC-LW 109
           +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +L++  G  + +C LW
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWHRAEQMGLKPPPEVHQVLQSHPGDPRFQCSLW 102

[Close]
BLAST of Bhi04M000981 vs. Swiss-Prot
Match: sp|Q9HCU8|DPOD4_HUMAN (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 57  MLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKA--GKVQLEC-LW 109
           +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +LK   G  + +C LW
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLKTHPGDPRFQCSLW 102

[Close]
BLAST of Bhi04M000981 vs. Swiss-Prot
Match: sp|Q9CWP8|DPOD4_MOUSE (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 57  MLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKA 100
           +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +LKA
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLKA 90

[Close]
BLAST of Bhi04M000981 vs. Swiss-Prot
Match: sp|O59835|DPOD4_SCHPO (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-07
Identity = 29/82 (35.37%), Postives = 41/82 (50.00%), Query Frame = 0 

Query: 16  NDRVDAAHKLFVEMSSVWKRRGGEGFIVTTRDSHDYGAYENMLRQFDMNMAYGPCLGMTR 75
           ++R+    +L  E+   W +   E  I       +    E +L  FD    YGP LGMTR
Sbjct: 56  DERIKEDDELSKEVEEAWNQIMAER-ISEPIHCENITKVEFILHHFDTTARYGPYLGMTR 115

Query: 76  MARWERACNLGLNPPKDIETLL 98
           M RW+RA N  LNPP+ +  +L
Sbjct: 116 MQRWKRAKNFNLNPPETVGKIL 136

[Close]
BLAST of Bhi04M000981 vs. TAIR10
Match: AT1G09815.1 (polymerase delta 4)

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0 

Query: 48  SHDYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECL 107
           + DY   E MLRQFDMN+ YGPCLGMTR+ RWERA  LG+NPP +IE LLK GKVQ +CL
Sbjct: 60  NEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCL 119

Query: 108 WDSRV 113
           W  RV
Sbjct: 120 WQGRV 124

[Close]
BLAST of Bhi04M000981 vs. TrEMBL
Match: tr|A0A1S3CT23|A0A1S3CT23_CUCME (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DYG  ENMLRQFDMNMAYGPCLGMTRMARWERAC+LGLNPPKDI TLLKAGKVQLECLWD
Sbjct: 63  DYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWD 122

Query: 110 SRV 113
           SRV
Sbjct: 123 SRV 125

[Close]
BLAST of Bhi04M000981 vs. TrEMBL
Match: tr|A0A0A0KND6|A0A0A0KND6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-26
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DYG  EN LRQFDMN AYGPCLGMTRMARWERAC+LGLNPPKDI TLLKAGKVQLECLWD
Sbjct: 63  DYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWD 122

Query: 110 SRV 113
           SRV
Sbjct: 123 SRV 125

[Close]
BLAST of Bhi04M000981 vs. TrEMBL
Match: tr|A0A067L638|A0A067L638_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02579 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 48/63 (76.19%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DY   E++LRQFDMNMAYGPCLGMTR+ARWERA  LG+NPPK+IE +LK+GKV LECLWD
Sbjct: 61  DYDKQEDVLRQFDMNMAYGPCLGMTRLARWERAQRLGMNPPKEIEGMLKSGKVSLECLWD 120

Query: 110 SRV 113
            RV
Sbjct: 121 GRV 123

[Close]
BLAST of Bhi04M000981 vs. TrEMBL
Match: tr|A0A200R6L6|A0A200R6L6_9MAGN (DNA polymerase delta OS=Macleaya cordata OX=56857 GN=BVC80_1833g35 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.1e-21
Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 0 

Query: 45  TRDSHDYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQL 104
           ++ ++DY   E MLRQFDMNMAYGPC+GMTR+ARWERA NLG+NPPK+IE+ LK GKV L
Sbjct: 23  SKSNNDYDESEEMLRQFDMNMAYGPCIGMTRLARWERANNLGMNPPKEIESFLKGGKVGL 82

Query: 105 ECLWDSRV 113
           E LW+ RV
Sbjct: 83  ESLWEGRV 90

[Close]
BLAST of Bhi04M000981 vs. TrEMBL
Match: tr|A0A2P4JN32|A0A2P4JN32_QUESU (Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_79408 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20
Identity = 46/63 (73.02%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DY   E+MLR+FDMNMAYGPCLGMTR+ARWERA +LGLNPP++IE LLKAGK + +CLWD
Sbjct: 61  DYDENEDMLRKFDMNMAYGPCLGMTRLARWERARSLGLNPPEEIEGLLKAGKARSDCLWD 120

Query: 110 SRV 113
            R+
Sbjct: 121 GRI 123

[Close]
BLAST of Bhi04M000981 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo])

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27
Identity = 59/63 (93.65%), Postives = 60/63 (95.24%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DYG  ENMLRQFDMNMAYGPCLGMTRMARWERAC+LGLNPPKDI TLLKAGKVQLECLWD
Sbjct: 63  DYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWD 122

Query: 110 SRV 113
           SRV
Sbjct: 123 SRV 125

[Close]
BLAST of Bhi04M000981 vs. NCBI nr
Match: XP_004143634.1 (PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_5G172885 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 3.8e-26
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DYG  EN LRQFDMN AYGPCLGMTRMARWERAC+LGLNPPKDI TLLKAGKVQLECLWD
Sbjct: 63  DYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWD 122

Query: 110 SRV 113
           SRV
Sbjct: 123 SRV 125

[Close]
BLAST of Bhi04M000981 vs. NCBI nr
Match: XP_022156193.1 (DNA polymerase delta subunit 4 [Momordica charantia])

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-23
Identity = 53/63 (84.13%), Postives = 54/63 (85.71%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DY   ENMLRQFDMN AYGPCLGMTRM RWERA   GLNPPKDIETLLKAG+VQLECLWD
Sbjct: 58  DYSESENMLRQFDMNSAYGPCLGMTRMERWERARKFGLNPPKDIETLLKAGEVQLECLWD 117

Query: 110 SRV 113
            RV
Sbjct: 118 GRV 120

[Close]
BLAST of Bhi04M000981 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 116.3 bits (290), Expect = 6.6e-23
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DYG  EN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+IETLLK GKVQLECLW 
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 110 SRV 113
           SR+
Sbjct: 121 SRI 123

[Close]
BLAST of Bhi04M000981 vs. NCBI nr
Match: XP_022995740.1 (uncharacterized protein LOC111491182 [Cucurbita maxima])

HSP 1 Score: 116.3 bits (290), Expect = 6.6e-23
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 50  DYGAYENMLRQFDMNMAYGPCLGMTRMARWERACNLGLNPPKDIETLLKAGKVQLECLWD 109
           DYG  EN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+IETLLK GKVQLECLW 
Sbjct: 61  DYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECLWA 120

Query: 110 SRV 113
           SR+
Sbjct: 121 SRI 123

The following BLAST results are available for this feature:
BLAST of Bhi04M000981 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q3T0X9|DPOD4_BOVIN5.4e-0845.45DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1[more]
sp|Q9HCU8|DPOD4_HUMAN1.2e-0747.27DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1[more]
sp|Q9CWP8|DPOD4_MOUSE1.2e-0753.49DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1[more]
sp|O59835|DPOD4_SCHPO5.9e-0735.37DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
BLAST of Bhi04M000981 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09815.11.1e-2267.69polymerase delta 4[more]
BLAST of Bhi04M000981 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CT23|A0A1S3CT23_CUCME1.3e-2793.65DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1[more]
tr|A0A0A0KND6|A0A0A0KND6_CUCSA2.5e-2690.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1[more]
tr|A0A067L638|A0A067L638_JATCU1.1e-2176.19Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02579 PE=4 SV=1[more]
tr|A0A200R6L6|A0A200R6L6_9MAGN4.1e-2169.12DNA polymerase delta OS=Macleaya cordata OX=56857 GN=BVC80_1833g35 PE=4 SV=1[more]
tr|A0A2P4JN32|A0A2P4JN32_QUESU1.6e-2073.02Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_79408 PE=4 SV=... [more]
BLAST of Bhi04M000981 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008467236.12.0e-2793.65PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo][more]
XP_004143634.13.8e-2690.48PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hy... [more]
XP_022156193.12.3e-2384.13DNA polymerase delta subunit 4 [Momordica charantia][more]
XP_022957680.16.6e-2382.54uncharacterized protein LOC111459143 [Cucurbita moschata][more]
XP_022995740.16.6e-2382.54uncharacterized protein LOC111491182 [Cucurbita maxima][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007218DNA_pol_delta_4
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006261 DNA-dependent DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0043625 delta DNA polymerase complex
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi04G000981Bhi04G000981gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi04M000981Bhi04M000981-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M000981.exon5Bhi04M000981.exon5exon
Bhi04M000981.exon4Bhi04M000981.exon4exon
Bhi04M000981.exon3Bhi04M000981.exon3exon
Bhi04M000981.exon2Bhi04M000981.exon2exon
Bhi04M000981.exon1Bhi04M000981.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi04M000981cds.Bhi04M000981CDS


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 11..31
e-value: 9.4E-4
score: 17.2
IPR007218DNA polymerase delta, subunit 4PFAMPF04081DNA_pol_delta_4coord: 49..98
e-value: 7.9E-20
score: 71.4
IPR007218DNA polymerase delta, subunit 4PANTHERPTHR14303DNA POLYMERASE DELTA SUBUNIT 4coord: 46..110