Bhi11G000463 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000463
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11 : 13857802 .. 13858355 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAACAACAAAAGGGTCGAATCGTGCTCAAACAACCAACTTATGCCAAAAGAATTTTGTCTCAGTTCGGAATGGCTGGCTGCAATGCCACGAAGTACCCGATGGAACCCAAGGCACAACTTCACAATGACATGGAAGGAGTACCAATTGATGCTACGGAGTACAGAAGCATCATTGGTTGTCTTAGATACTTGCTGAACACAAGATTGGATCTCTCGTATGTTTTTGGGATGGTGAGCGGGTATATGGAAAGGCCTACGGCCATGTATCACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCACTTTGGGCTCACTTATGTGAAAGGTCCCCGAGAAGTCGATATATTTGGCTACTCTGACAGCGATTTAGCCGGTGATCTCGACGGGAGGAAAAGCACAAGTGGAATGGCGTTCTACTTAAATGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCTGAGTTCATGGCAGCCACTACCGCGGCTTGTCAAGCGTTGTGGTTAAGAAGCCTT

mRNA sequence

TGGAACAACAAAAGGGTCGAATCGTGCTCAAACAACCAACTTATGCCAAAAGAATTTTGTCTCAGTTCGGAATGGCTGGCTGCAATGCCACGAAGTACCCGATGGAACCCAAGGCACAACTTCACAATGACATGGAAGGAGTACCAATTGATGCTACGGAGTACAGAAGCATCATTGGTTGTCTTAGATACTTGCTGAACACAAGATTGGATCTCTCGTATGTTTTTGGGATGGTGAGCGGGTATATGGAAAGGCCTACGGCCATGTATCACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCACTTTGGGCTCACTTATGTGAAAGGTCCCCGAGAAGTCGATATATTTGGCTACTCTGACAGCGATTTAGCCGGTGATCTCGACGGGAGGAAAAGCACAAGTGGAATGGCGTTCTACTTAAATGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCTGAGTTCATGGCAGCCACTACCGCGGCTTGTCAAGCGTTGTGGTTAAGAAGCCTT

Coding sequence (CDS)

TGGAACAACAAAAGGGTCGAATCGTGCTCAAACAACCAACTTATGCCAAAAGAATTTTGTCTCAGTTCGGAATGGCTGGCTGCAATGCCACGAAGTACCCGATGGAACCCAAGGCACAACTTCACAATGACATGGAAGGAGTACCAATTGATGCTACGGAGTACAGAAGCATCATTGGTTGTCTTAGATACTTGCTGAACACAAGATTGGATCTCTCGTATGTTTTTGGGATGGTGAGCGGGTATATGGAAAGGCCTACGGCCATGTATCACAAGGTGGTCAAGCAAATACTTAGGTATTTGAGAGGGACAATTCACTTTGGGCTCACTTATGTGAAAGGTCCCCGAGAAGTCGATATATTTGGCTACTCTGACAGCGATTTAGCCGGTGATCTCGACGGGAGGAAAAGCACAAGTGGAATGGCGTTCTACTTAAATGAAAGCTTGGTTTCATGGAATTCGCAAAAGCAAAAGACGGTGGCACTCTCATCTTGCGAAGCTGAGTTCATGGCAGCCACTACCGCGGCTTGTCAAGCGTTGTGGTTAAGAAGCCTT

Protein sequence

EQQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWLRSL

Homology

[Close]

BLAST of Bhi11G000463 vs. TAIR10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-27
Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 0


Query: 11  QPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLNTRLD 70
           Q  YA  +L + G+ GC  +  PM+P         G  +DA  YR +IG L YL  TRLD
Sbjct: 335 QRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLD 394

Query: 71  LSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSDLAGD 130
           +S+    +S + E P   + + V +IL Y++GT+  GL Y     E+ +  +SD+     
Sbjct: 395 ISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFY-SSQAEMQLQVFSDASFQSC 454

Query: 131 LDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWL 182
            D R+ST+G   +L  SL+SW S+KQ+ V+ SS EAE+ A + A  + +WL
Sbjct: 455 KDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504

[Close]

BLAST of Bhi11G000463 vs. TAIR10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.2e-25
Identity = 61/174 (35.06%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 7   IVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLN 66
           + L Q  YA++IL+  GM  C     P+  K          P D +++RSI+G L+YL  
Sbjct: 54  LFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTL 113

Query: 67  TRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSD 126
           TR D+SY   +V   M  PT     ++K++LRY++GTI  GL Y+    ++++  + DSD
Sbjct: 114 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL-YIHKNSKLNVQAFCDSD 173

Query: 127 LAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALW 181
            AG    R+ST+G   +L  +++SW++++Q TV+ SS E E+ A    A +  W
Sbjct: 174 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Bhi11G000463 vs. Swiss-Prot
Match: sp|P04146|COPIA_DROME (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-27
Identity = 79/189 (41.80%), Postives = 110/189 (58.20%), Query Frame = 0


Query: 1    EQQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKA--QLHNDMEGVPIDATEYRSII 60
            E Q+ +I L Q  Y K+ILS+F M  CNA   P+  K   +L N  E      T  RS+I
Sbjct: 1129 EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC---NTPCRSLI 1188

Query: 61   GCLRY-LLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKG-PRE 120
            GCL Y +L TR DL+    ++S Y  +  +   + +K++LRYL+GTI   L + K    E
Sbjct: 1189 GCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFE 1248

Query: 121  VDIFGYSDSDLAGDLDGRKSTSGMAFYLNE-SLVSWNSQKQKTVALSSCEAEFMAATTAA 180
              I GY DSD AG    RKST+G  F + + +L+ WN+++Q +VA SS EAE+MA   A 
Sbjct: 1249 NKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAV 1308

Query: 181  CQALWLRSL 185
             +ALWL+ L
Sbjct: 1309 REALWLKFL 1314

[Close]

BLAST of Bhi11G000463 vs. Swiss-Prot
Match: sp|Q9ZT94|POLR2_ARATH (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-25
Identity = 71/178 (39.89%), Postives = 97/178 (54.49%), Query Frame = 0


Query: 9    LKQPTYAKRILSQFGMAGCNATKYPM--EPKAQLHNDMEGVPIDATEYRSIIGCLRYLLN 68
            L Q  Y   +L++  M        PM   PK  LH+  + +P D TEYR I+G L+YL  
Sbjct: 1183 LSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTK-LP-DPTEYRGIVGSLQYLAF 1242

Query: 69   TRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSD 128
            TR DLSY    +S YM  PT  +   +K++LRYL GT   G+   KG   + +  YSD+D
Sbjct: 1243 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKG-NTLSLHAYSDAD 1302

Query: 129  LAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWLRSL 185
             AGD D   ST+G   YL    +SW+S+KQK V  SS EAE+ +    + +  W+ SL
Sbjct: 1303 WAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSL 1357

[Close]

BLAST of Bhi11G000463 vs. Swiss-Prot
Match: sp|Q94HW2|POLR1_ARATH (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.1e-25
Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 9    LKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLNTR 68
            L Q  Y   +L++  M        PM P  +L         D TEYR I+G L+YL  TR
Sbjct: 1200 LSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTR 1259

Query: 69   LDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSDLA 128
             D+SY    +S +M  PT  + + +K+ILRYL GT + G+   KG   + +  YSD+D A
Sbjct: 1260 PDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKG-NTLSLHAYSDADWA 1319

Query: 129  GDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWLRSL 185
            GD D   ST+G   YL    +SW+S+KQK V  SS EAE+ +    + +  W+ SL
Sbjct: 1320 GDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSL 1374

[Close]

BLAST of Bhi11G000463 vs. Swiss-Prot
Match: sp|P10978|POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-24
Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 1    EQQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPID------ATEY 60
            E+   ++ L Q  Y +R+L +F M        P+    +L   M    ++         Y
Sbjct: 1052 ERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPY 1111

Query: 61   RSIIGCLRY-LLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKG 120
             S +G L Y ++ TR D+++  G+VS ++E P   + + VK ILRYLRGT    L +  G
Sbjct: 1112 SSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCF--G 1171

Query: 121  PREVDIFGYSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATT 180
              +  + GY+D+D+AGD+D RKS++G  F  +   +SW S+ QK VALS+ EAE++AAT 
Sbjct: 1172 GSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATE 1231

Query: 181  AACQALWLR 183
               + +WL+
Sbjct: 1232 TGKEMIWLK 1238

[Close]

BLAST of Bhi11G000463 vs. Swiss-Prot
Match: sp|P92519|M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-24
Identity = 61/174 (35.06%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 7   IVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLN 66
           + L Q  YA++IL+  GM  C     P+  K          P D +++RSI+G L+YL  
Sbjct: 54  LFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTL 113

Query: 67  TRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSD 126
           TR D+SY   +V   M  PT     ++K++LRY++GTI  GL Y+    ++++  + DSD
Sbjct: 114 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL-YIHKNSKLNVQAFCDSD 173

Query: 127 LAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALW 181
            AG    R+ST+G   +L  +++SW++++Q TV+ SS E E+ A    A +  W
Sbjct: 174 WAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Bhi11G000463 vs. TrEMBL
Match: tr|A0A0A9FJ50|A0A0A9FJ50_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 120/183 (65.57%), Postives = 148/183 (80.87%), Query Frame = 0


Query: 2   QQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCL 61
           QQ+G + +KQ  YA+++L QFGM   N TKYPME KAQ+H D +G P+DATEYR ++GCL
Sbjct: 59  QQEGSVTIKQSAYARKVLKQFGMEDYNPTKYPMEHKAQVHKDSDGQPVDATEYRRVVGCL 118

Query: 62  RYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFG 121
           RYLL+TR DLS+  G+ S +MERPT M+ K+VKQ+LRYL+GTI  GL YV+G  +  + G
Sbjct: 119 RYLLHTRPDLSHAVGVASRHMERPTVMHQKLVKQMLRYLKGTIDLGLVYVQGTGKEVLTG 178

Query: 122 YSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWL 181
           ++DSDL GDLD RKST GMAFYLN +LVSW SQKQKTVALSSCEAEF+AA TAACQALWL
Sbjct: 179 FTDSDLGGDLDDRKSTGGMAFYLNNNLVSWTSQKQKTVALSSCEAEFIAAATAACQALWL 238

Query: 182 RSL 185
           +S+
Sbjct: 239 KSM 241

[Close]

BLAST of Bhi11G000463 vs. TrEMBL
Match: tr|Q0J8A6|Q0J8A6_ORYSJ (Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.8e-64
Identity = 123/183 (67.21%), Postives = 144/183 (78.69%), Query Frame = 0


Query: 2    QQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCL 61
            Q +  I +KQ  YAK+ILSQFGM GCN T  PMEP++ LH D +G PIDATEYR +IGCL
Sbjct: 1151 QGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCL 1210

Query: 62   RYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFG 121
            RYLL+TR DLSY  G+ S +MERPT M+ K VK ILRYL+GT+  GL +  G   +DI G
Sbjct: 1211 RYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITG 1270

Query: 122  YSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWL 181
            ++DSDLAGD+D R+ST GMAFY+N SLVSW SQKQKTVALSSCEAEFMAAT AAC ALWL
Sbjct: 1271 FTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWL 1330

Query: 182  RSL 185
            R+L
Sbjct: 1331 RAL 1333

[Close]

BLAST of Bhi11G000463 vs. TrEMBL
Match: tr|B8BDZ6|B8BDZ6_ORYSI (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.8e-64
Identity = 123/183 (67.21%), Postives = 144/183 (78.69%), Query Frame = 0


Query: 2    QQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCL 61
            Q +  I +KQ  YAK+ILSQFGM GCN T  PMEP++ LH D +G PIDATEYR +IGCL
Sbjct: 1151 QGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCL 1210

Query: 62   RYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFG 121
            RYLL+TR DLSY  G+ S +MERPT M+ K VK ILRYL+GT+  GL +  G   +DI G
Sbjct: 1211 RYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITG 1270

Query: 122  YSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWL 181
            ++DSDLAGD+D R+ST GMAFY+N SLVSW SQKQKTVALSSCEAEFMAAT AAC ALWL
Sbjct: 1271 FTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWL 1330

Query: 182  RSL 185
            R+L
Sbjct: 1331 RAL 1333

[Close]

BLAST of Bhi11G000463 vs. TrEMBL
Match: tr|Q10RM4|Q10RM4_ORYSJ (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os03g05850 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.4e-63
Identity = 121/184 (65.76%), Postives = 146/184 (79.35%), Query Frame = 0


Query: 1    EQQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGC 60
            +Q +    LKQ  YAK++LSQFGM  CN+   P++P++QL  D EG P+DATEYR IIG 
Sbjct: 1132 DQDESATTLKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGS 1191

Query: 61   LRYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIF 120
            LRYLL+TR DLSY  G+ S +MERPT M+ K VKQILRY++GT+ +GL Y  G   + I 
Sbjct: 1192 LRYLLHTRPDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKIT 1251

Query: 121  GYSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALW 180
            GY+DSDLAGDLD R+ST GMAFY+N+SLV+W+SQKQKTVALSSCEAEFMAATTAACQALW
Sbjct: 1252 GYTDSDLAGDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALW 1311

Query: 181  LRSL 185
            LR L
Sbjct: 1312 LRLL 1315

[Close]

BLAST of Bhi11G000463 vs. TrEMBL
Match: tr|Q7XMW3|Q7XMW3_ORYSJ (OSJNBb0040D15.11 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0040D15.11 PE=4 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 118/178 (66.29%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 7   IVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLN 66
           I +KQ  YA++IL+QFGM  CN+T  P+E ++QLH D EG  +D TEYR +IGCLRYLL+
Sbjct: 78  IAIKQAAYARKILTQFGMLDCNSTSIPIEHRSQLHKDAEGSTVDPTEYRRLIGCLRYLLH 137

Query: 67  TRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSD 126
           TR DLSY  G+VS +MERPT M+ K +KQILRYL+GTI+ GL +  G   V+I G++DSD
Sbjct: 138 TRPDLSYAVGVVSRFMERPTVMHFKALKQILRYLKGTINCGLMFSGGNGAVEITGFTDSD 197

Query: 127 LAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWLRSL 185
           LAGD D  +STSGMAFY N SLVSW+SQKQKTVALSSCEAEFMAAT AAC ALWLR L
Sbjct: 198 LAGDSDDSRSTSGMAFYFNGSLVSWSSQKQKTVALSSCEAEFMAATAAACHALWLRGL 255

[Close]

BLAST of Bhi11G000463 vs. NCBI nr
Match: BAF22809.1 (Os08g0125300 [Oryza sativa Japonica Group] >BAG92574.1 unnamed protein product [Oryza sativa Japonica Group] >BAT03649.1 Os08g0125300 [Oryza sativa Japonica Group])

HSP 1 Score: 253.4 bits (646), Expect = 5.7e-64
Identity = 123/183 (67.21%), Postives = 144/183 (78.69%), Query Frame = 0


Query: 2    QQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCL 61
            Q +  I +KQ  YAK+ILSQFGM GCN T  PMEP++ LH D +G PIDATEYR +IGCL
Sbjct: 1151 QGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCL 1210

Query: 62   RYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFG 121
            RYLL+TR DLSY  G+ S +MERPT M+ K VK ILRYL+GT+  GL +  G   +DI G
Sbjct: 1211 RYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITG 1270

Query: 122  YSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWL 181
            ++DSDLAGD+D R+ST GMAFY+N SLVSW SQKQKTVALSSCEAEFMAAT AAC ALWL
Sbjct: 1271 FTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWL 1330

Query: 182  RSL 185
            R+L
Sbjct: 1331 RAL 1333

[Close]

BLAST of Bhi11G000463 vs. NCBI nr
Match: EEC84282.1 (hypothetical protein OsI_30754 [Oryza sativa Indica Group])

HSP 1 Score: 253.4 bits (646), Expect = 5.7e-64
Identity = 123/183 (67.21%), Postives = 144/183 (78.69%), Query Frame = 0


Query: 2    QQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCL 61
            Q +  I +KQ  YAK+ILSQFGM GCN T  PMEP++ LH D +G PIDATEYR +IGCL
Sbjct: 1151 QGENGIAIKQAAYAKKILSQFGMQGCNPTSIPMEPRSLLHKDADGNPIDATEYRRVIGCL 1210

Query: 62   RYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFG 121
            RYLL+TR DLSY  G+ S +MERPT M+ K VK ILRYL+GT+  GL +  G   +DI G
Sbjct: 1211 RYLLHTRPDLSYAVGVASRFMERPTTMHLKAVKMILRYLKGTLDSGLVFASGSGSLDITG 1270

Query: 122  YSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWL 181
            ++DSDLAGD+D R+ST GMAFY+N SLVSW SQKQKTVALSSCEAEFMAAT AAC ALWL
Sbjct: 1271 FTDSDLAGDMDDRRSTGGMAFYVNSSLVSWCSQKQKTVALSSCEAEFMAATAAACHALWL 1330

Query: 182  RSL 185
            R+L
Sbjct: 1331 RAL 1333

[Close]

BLAST of Bhi11G000463 vs. NCBI nr
Match: ABF94034.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 250.8 bits (639), Expect = 3.7e-63
Identity = 121/184 (65.76%), Postives = 146/184 (79.35%), Query Frame = 0


Query: 1    EQQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGC 60
            +Q +    LKQ  YAK++LSQFGM  CN+   P++P++QL  D EG P+DATEYR IIG 
Sbjct: 1132 DQDESATTLKQTAYAKKLLSQFGMMECNSVSIPIDPRSQLSKDPEGHPVDATEYRRIIGS 1191

Query: 61   LRYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIF 120
            LRYLL+TR DLSY  G+ S +MERPT M+ K VKQILRY++GT+ +GL Y  G   + I 
Sbjct: 1192 LRYLLHTRPDLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKIT 1251

Query: 121  GYSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALW 180
            GY+DSDLAGDLD R+ST GMAFY+N+SLV+W+SQKQKTVALSSCEAEFMAATTAACQALW
Sbjct: 1252 GYTDSDLAGDLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALW 1311

Query: 181  LRSL 185
            LR L
Sbjct: 1312 LRLL 1315

[Close]

BLAST of Bhi11G000463 vs. NCBI nr
Match: CAE04421.2 (OSJNBb0040D15.11 [Oryza sativa Japonica Group])

HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60
Identity = 118/178 (66.29%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 7   IVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGCLRYLLN 66
           I +KQ  YA++IL+QFGM  CN+T  P+E ++QLH D EG  +D TEYR +IGCLRYLL+
Sbjct: 78  IAIKQAAYARKILTQFGMLDCNSTSIPIEHRSQLHKDAEGSTVDPTEYRRLIGCLRYLLH 137

Query: 67  TRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIFGYSDSD 126
           TR DLSY  G+VS +MERPT M+ K +KQILRYL+GTI+ GL +  G   V+I G++DSD
Sbjct: 138 TRPDLSYAVGVVSRFMERPTVMHFKALKQILRYLKGTINCGLMFSGGNGAVEITGFTDSD 197

Query: 127 LAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALWLRSL 185
           LAGD D  +STSGMAFY N SLVSW+SQKQKTVALSSCEAEFMAAT AAC ALWLR L
Sbjct: 198 LAGDSDDSRSTSGMAFYFNGSLVSWSSQKQKTVALSSCEAEFMAATAAACHALWLRGL 255

[Close]

BLAST of Bhi11G000463 vs. NCBI nr
Match: XP_020270504.1 (uncharacterized protein LOC109845645 [Asparagus officinalis])

HSP 1 Score: 240.4 bits (612), Expect = 5.0e-60
Identity = 114/184 (61.96%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 1   EQQKGRIVLKQPTYAKRILSQFGMAGCNATKYPMEPKAQLHNDMEGVPIDATEYRSIIGC 60
           +Q+   I L+Q  YAK++L QFGM  CN T+YPME K +L  D EG P+D TEYR IIG 
Sbjct: 72  DQRDDCIALRQAAYAKKVLGQFGMMDCNPTQYPMETKLKLGKDSEGTPVDVTEYRRIIGS 131

Query: 61  LRYLLNTRLDLSYVFGMVSGYMERPTAMYHKVVKQILRYLRGTIHFGLTYVKGPREVDIF 120
           LRYL +TR D++Y  G+VS YME PT ++ +VVK ILRY++GT+ +GL Y +G    ++ 
Sbjct: 132 LRYLTHTRPDITYAVGIVSRYMEHPTVLHRQVVKHILRYVKGTMSYGLVYKRGRGNEELV 191

Query: 121 GYSDSDLAGDLDGRKSTSGMAFYLNESLVSWNSQKQKTVALSSCEAEFMAATTAACQALW 180
           G++DSDLAGD+D R+ST GMAFYL +SLV+W SQKQKTVALSSCEAEFMAAT AACQ LW
Sbjct: 192 GFTDSDLAGDVDDRRSTGGMAFYLGDSLVTWTSQKQKTVALSSCEAEFMAATAAACQGLW 251

Query: 181 LRSL 185
           LRSL
Sbjct: 252 LRSL 255

The following BLAST results are available for this feature:

BLAST of Bhi11G000463 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	4.0e-27	36.84	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.2e-25	35.06	DNA/RNA polymerases superfamily protein	[more]

BLAST of Bhi11G000463 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P04146\|COPIA_DROME	5.0e-27	41.80	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
sp\|Q9ZT94\|POLR2_ARATH	2.7e-25	39.89	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
sp\|Q94HW2\|POLR1_ARATH	6.1e-25	38.07	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
sp\|P10978\|POLX_TOBAC	1.8e-24	34.92	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
sp\|P92519\|M810_ARATH	3.9e-24	35.06	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Bhi11G000463 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A9FJ50\|A0A0A9FJ50_ARUDO	1.7e-64	65.57	Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1	[more]
tr\|Q0J8A6\|Q0J8A6_ORYSJ	3.8e-64	67.21	Os08g0125300 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0125300 PE...	[more]
tr\|B8BDZ6\|B8BDZ6_ORYSI	3.8e-64	67.21	Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30754 PE=4...	[more]
tr\|Q10RM4\|Q10RM4_ORYSJ	2.4e-63	65.76	Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ...	[more]
tr\|Q7XMW3\|Q7XMW3_ORYSJ	1.5e-60	66.29	OSJNBb0040D15.11 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0040D...	[more]

BLAST of Bhi11G000463 vs. NCBI nr


Match Name	E-value	Identity	Description
BAF22809.1	5.7e-64	67.21	Os08g0125300 [Oryza sativa Japonica Group] >BAG92574.1 unnamed protein product [...	[more]
EEC84282.1	5.7e-64	67.21	hypothetical protein OsI_30754 [Oryza sativa Indica Group]	[more]
ABF94034.1	3.7e-63	65.76	retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]	[more]
CAE04421.2	2.2e-60	66.29	OSJNBb0040D15.11 [Oryza sativa Japonica Group]	[more]
XP_020270504.1	5.0e-60	61.96	uncharacterized protein LOC109845645 [Asparagus officinalis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000463	Bhi11M000463	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR44381	FAMILY NOT NAMED	coord: 2..183
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 121..184 e-value: 9.1089E-35 score: 120.266

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000463	Cucumber (Gy14) v1	cgywgoB049
Bhi11G000463	Cucumber (Gy14) v2	cgybwgoB209
Bhi11G000463	Cucurbita maxima (Rimu)	cmawgoB0980
Bhi11G000463	Cucurbita pepo (Zucchini)	cpewgoB0272
Bhi11G000463	Wild cucumber (PI 183967)	cpiwgoB218
Bhi11G000463	Cucumber (Chinese Long) v3	cucwgoB223
Bhi11G000463	Cucumber (Chinese Long) v2	cuwgoB218
Bhi11G000463	Bottle gourd (USVL1VR-Ls)	lsiwgoB410
Bhi11G000463	Melon (DHL92) v3.6.1	medwgoB499
Bhi11G000463	Melon (DHL92) v3.5.1	mewgoB499
Bhi11G000463	Watermelon (Charleston Gray)	wcgwgoB080
Bhi11G000463	Watermelon (97103) v2	wgowmbB003
Bhi11G000463	Watermelon (97103) v1	wgowmB009