Bhi10M001526 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10M001526
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Auxin-responsive protein
Location	chr10 : 47784545 .. 47784838 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGATTTCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTGGTAGTTTATGTGGGAGAGATCCAAATGAAACGGTTCATTGTTCCAATATCTTACGTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCAGAGGAGGAATTTGGCTTCCATCATCCGCAAGGCGGCCTAACGATTCCTTGCAAAGAAGATGCCTTTACTGCACTTACTTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGATTTCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTGGTAGTTTATGTGGGAGAGATCCAAATGAAACGGTTCATTGTTCCAATATCTTACGTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCAGAGGAGGAATTTGGCTTCCATCATCCGCAAGGCGGCCTAACGATTCCTTGCAAAGAAGATGCCTTTACTGCACTTACTTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGATTTCTATCTTTGGTTCCTCATGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACCAAAAACCAGTTGGATGTTCCAAAAGGTCATGTGGTAGTTTATGTGGGAGAGATCCAAATGAAACGGTTCATTGTTCCAATATCTTACGTAAACCATCCGTCGTTCCAGCAACTGCTCAGCCACGCAGAGGAGGAATTTGGCTTCCATCATCCGCAAGGCGGCCTAACGATTCCTTGCAAAGAAGATGCCTTTACTGCACTTACTTCTAGATTGCAAGTATCTTGA

Protein sequence

MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS

Homology

[Close]

BLAST of Bhi10M001526 vs. TAIR10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-25
Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILK----MQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHP 60
          M IR   ++  +KQIL+    + S    + LDVPKG++ VYVGE  MKRF+VP+SY++ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSXXXSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F  L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Bhi10M001526 vs. TAIR10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 1   MGIRFLSLVPHAKQILKMQSGFTKNQLD------VPKGHVVVYVG---EIQMKRFIVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHV VYVG   E++ KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YVNHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFTAL-TSRLQ 96
           ++NHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F  L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Bhi10M001526 vs. TAIR10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-24
Identity = 53/98 (54.08%), Postives = 69/98 (70.41%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGE-IQMKRFIVPISYVNHPSFQ 60
          M IR   ++  +KQ+LK  S  + N + +PKGH+ VYVGE +Q +RF+VP++Y++HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  F  L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Bhi10M001526 vs. TAIR10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-23
Identity = 54/102 (52.94%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 7   SLVPHAKQILKMQSGFTKNQLD-----------VPKGHVVVYVGE-IQMKRFIVPISYVN 66
           S++P+AKQI K QS   KN              VPKGHV VYVGE ++ KRF+VPISY+N
Sbjct: 6   SMLPNAKQIFKSQSMRNKNXXXXXXXXXXXSGLVPKGHVAVYVGEQMEKKRFVVPISYLN 65

Query: 67  HPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQV 97
           HP F++ L+ AEEE GFHH  GGLTIPC+E++F  L +  Q+
Sbjct: 66  HPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of Bhi10M001526 vs. TAIR10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 7.0e-23
Identity = 56/104 (53.85%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 1   MGIRFLSLVPHAKQILKMQSG------FTKNQLDVPKGHVVVYVGE-IQMKRFIVPISYV 60
           MGI+ + L    +++ +  S        T    +VPKGHV VYVGE    KRF++PISY+
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 61  NHPSFQQLLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
           NHP FQ LL+ AEEEFGF HP GGLTIPC ED FTAL S L  S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of Bhi10M001526 vs. Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21
Identity = 51/84 (60.71%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQLLSHAEEEFGF 71
          AK+IL   +G        PKG + VYVGE Q KR++VP+SY+N PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFTALTSRLQ 96
           HP GGLTIPC ED F  +TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Bhi10M001526 vs. Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.8e-21
Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 19 QSGFTKNQ-----LDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQLLSHAEEEFGFHH 78
          ++ F+ NQ     +DV KG++ VYVGE +M+RF++P+SY+N PSFQ LLS AEEEFG+HH
Sbjct: 10 KASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHH 69

Query: 79 PQGGLTIPCKEDAFTALTSRL 95
          P GGLTIPC ED F  +TS L
Sbjct: 70 PNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of Bhi10M001526 vs. Swiss-Prot
Match: sp|P33080|AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.8e-21
Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 23 TKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQLLSHAEEEFGFHHPQGGLTIPC 82
          +   ++VPKG++VVYVG+ +M+RF++P+SY+N PSFQ LL+ AEEEFG+ HP GGLTIPC
Sbjct: 19 SSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPC 78

Query: 83 KEDAFTALTSRL 95
          KED F  +TS L
Sbjct: 79 KEDEFLTVTSHL 89

[Close]

BLAST of Bhi10M001526 vs. Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.8e-21
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 17 KMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG + VYVGE Q KR++VPISY+N PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTALTSRLQ 96
          GLTIPC ED F  +TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Bhi10M001526 vs. Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20
Identity = 49/94 (52.13%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MG R    +P  ++ L  ++  +   LD PKG++ VYVGE  MKRF++P+S++N P FQ 
Sbjct: 1  MGFR----LPGIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPLFQD 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRL 95
          LLS AEEEFG+ HP GGLTIPC ED F  +TS L
Sbjct: 61 LLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89

[Close]

BLAST of Bhi10M001526 vs. TrEMBL
Match: tr|A0A1S3C5X3|A0A1S3C5X3_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-43
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIR LSLVPHAKQ+LKMQSGFTKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKED F  LTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Bhi10M001526 vs. TrEMBL
Match: tr|A0A1S4E1Q7|A0A1S4E1Q7_CUCME (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991558 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.6e-43
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAFT +TSRLQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSRLQAS 97

[Close]

BLAST of Bhi10M001526 vs. TrEMBL
Match: tr|A0A0A0LLF1|A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIR LSLVPHAKQILK+QSG TKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAFT +TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Bhi10M001526 vs. TrEMBL
Match: tr|A0A0A0LPI0|A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.2e-42
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MG R LSLVPHAKQILKMQSGFTKNQL+VPKGHV VYVGEIQ KRF+VPISY+N PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF  LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Bhi10M001526 vs. TrEMBL
Match: tr|A0A1S3C5I3|A0A1S3C5I3_CUCME (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIR LSLVPHAKQILKMQSGFTKN+L+VPKGHV VYVGEIQ KRF+VPISY+N PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LL+ AEEEFGFHHP GGLTIPCKEDAF  LTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Bhi10M001526 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 189.1 bits (479), Expect = 7.0e-45
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAF  LTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Bhi10M001526 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata])

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAF  LTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Bhi10M001526 vs. NCBI nr
Match: XP_023512611.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LL+HAEE+FGFHHPQGGLTIPCKEDAF  LTSRLQVS
Sbjct: 61 LLNHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Bhi10M001526 vs. NCBI nr
Match: XP_022944371.1 (auxin-responsive protein SAUR23-like [Cucurbita moschata])

HSP 1 Score: 185.3 bits (469), Expect = 1.0e-43
Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIRFLSLVPHAKQILKMQ GFTKNQLDVPKGHV VYVGEIQ KRF+VPISY+NHPSFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LLSHAEE+FGFHHPQGGLTIPCKEDAF  LTSRL VS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLHVS 97

[Close]

BLAST of Bhi10M001526 vs. NCBI nr
Match: XP_022146168.1 (auxin-responsive protein SAUR24-like [Momordica charantia] >XP_022146169.1 auxin-responsive protein SAUR24-like [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVVVYVGEIQMKRFIVPISYVNHPSFQQ 60
          MGIR LSLVPHAKQ+LK+QSGFTK+QLDVPKGHV VYVGEIQ KRF+VPISY+NHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKIQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFTALTSRLQVS 98
          LLSHAEEEFGFHHPQGGLTIPCKEDAF  LTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIVLTSRLQVS 97

The following BLAST results are available for this feature:

BLAST of Bhi10M001526 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	9.7e-25	55.67	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.7e-24	54.29	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.8e-24	54.08	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	1.8e-23	52.94	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	7.0e-23	53.85	SAUR-like auxin-responsive protein family	[more]

BLAST of Bhi10M001526 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FK62\|SAU24_ARATH	1.3e-21	60.71	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
sp\|P33083\|AX6B_SOYBN	2.8e-21	59.26	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|P33080\|AX10A_SOYBN	4.8e-21	61.11	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|Q9FJG0\|SAU20_ARATH	4.8e-21	62.03	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 S...	[more]
sp\|P32295\|ARG7_VIGRR	1.4e-20	52.13	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]

BLAST of Bhi10M001526 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5X3\|A0A1S3C5X3_CUCME	1.9e-43	89.69	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=...	[more]
tr\|A0A1S4E1Q7\|A0A1S4E1Q7_CUCME	9.6e-43	87.63	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991558 PE=...	[more]
tr\|A0A0A0LLF1\|A0A0A0LLF1_CUCSA	2.1e-42	86.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258700 PE=4 SV=1	[more]
tr\|A0A0A0LPI0\|A0A0A0LPI0_CUCSA	6.2e-42	87.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=4 SV=1	[more]
tr\|A0A1S3C5I3\|A0A1S3C5I3_CUCME	1.2e-40	85.57	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=...	[more]

BLAST of Bhi10M001526 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944365.1	7.0e-45	92.78	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	1.2e-44	92.78	auxin-responsive protein SAUR24-like [Cucurbita moschata]	[more]
XP_023512611.1	1.6e-44	91.75	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944371.1	1.0e-43	90.72	auxin-responsive protein SAUR23-like [Cucurbita moschata]	[more]
XP_022146168.1	1.3e-43	89.69	auxin-responsive protein SAUR24-like [Momordica charantia] >XP_022146169.1 auxin...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi10G001526	Bhi10G001526	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi10M001526	cds.Bhi10M001526	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi10M001526.exon1	Bhi10M001526.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi10M001526	Bhi10M001526-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 e-value: 3.6E-26 score: 91.1
None	No IPR available	PANTHER	PTHR31929:SF15	SUBFAMILY NOT NAMED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..95