BhiUN32G18 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN32G18
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Photosystem II reaction center protein T
Location	Contig32 : 267732 .. 267944 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCATTGGTTTATACATTCCTCTTAGTCTCGACTCTAGGAATCATTTTTTTCGCTATCTTTTTTCGCGAACCGCCTAAAGTTCCAACGAAAAAGGCGAAATTCTTTCTCATTACTTCAACTAGTCCCCGTGTTCCTCGAATGGATCTCTTAGTTGTTGAGAGGGTTGCCCAAAAGCAGTATATAAGGCATACCCAGTCAAACTTACAA

mRNA sequence

ATGGAAGCATTGGTTTATACATTCCTCTTAGTCTCGACTCTAGGAATCATTTTTTTCGCTATCTTTTTTCGCGAACCGCCTAAAGTTCCAACGAAAAAGGCGAAATTCTTTCTCATTACTTCAACTAGTCCCCGTGTTCCTCGAATGGATCTCTTAGTTGTTGAGAGGGTTGCCCAAAAGCAGTATATAAGGCATACCCAGTCAAACTTACAA

Coding sequence (CDS)

ATGGAAGCATTGGTTTATACATTCCTCTTAGTCTCGACTCTAGGAATCATTTTTTTCGCTATCTTTTTTCGCGAACCGCCTAAAGTTCCAACGAAAAAGGCGAAATTCTTTCTCATTACTTCAACTAGTCCCCGTGTTCCTCGAATGGATCTCTTAGTTGTTGAGAGGGTTGCCCAAAAGCAGTATATAAGGCATACCCAGTCAAACTTACAA

Protein sequence

MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAKFFLITSTSPRVPRMDLLVVERVAQKQYIRHTQSNLQ

Homology

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BLAST of BhiUN32G18 vs. TAIR10
Match: ATCG00690.1 (photosystem II reaction center protein T)

HSP 1 Score: 62.0 bits (149), Expect = 1.7e-10
Identity = 31/33 (93.94%), Postives = 32/33 (96.97%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK 34
          MEALVYTFLLVSTLGIIFFAIFFREPPK+ TKK
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKISTKK 33

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BLAST of BhiUN32G18 vs. Swiss-Prot
Match: sp|Q9GFA4|PSBT_CABCA (Photosystem II reaction center protein T OS=Cabomba caroliniana OX=4426 GN=psbT PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-11
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 35

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BLAST of BhiUN32G18 vs. Swiss-Prot
Match: sp|Q09MF0|PSBT_CITSI (Photosystem II reaction center protein T OS=Citrus sinensis OX=2711 GN=psbT PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.3e-11
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK K
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKTK 35

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BLAST of BhiUN32G18 vs. Swiss-Prot
Match: sp|Q49KX1|PSBT_EUCGG (Photosystem II reaction center protein T OS=Eucalyptus globulus subsp. globulus OX=71271 GN=psbT PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.3e-11
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK K
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKVK 35

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BLAST of BhiUN32G18 vs. Swiss-Prot
Match: sp|Q7HIW5|PSBT_HYDCA (Photosystem II reaction center protein T OS=Hydrastis canadensis OX=13569 GN=psbT PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.3e-11
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK K
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKVK 35

[Close]

BLAST of BhiUN32G18 vs. Swiss-Prot
Match: sp|Q06RA5|PSBT_JASNU (Photosystem II reaction center protein T OS=Jasminum nudiflorum OX=126431 GN=psbT PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.3e-11
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK K
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKVK 35

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BLAST of BhiUN32G18 vs. TrEMBL
Match: tr|B6VJY0|B6VJY0_VITVI (PSII T-protein OS=Vitis vinifera OX=29760 GN=psbT PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-09
Identity = 38/47 (80.85%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAKFFLITSTSPRVP 48
          MEALVYTFLLVSTLGIIFFAIFFREPPK  TKK KFF I S S   P
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKEKTKKMKFFFIISISVMSP 47

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BLAST of BhiUN32G18 vs. TrEMBL
Match: tr|A0A0B5CZF8|A0A0B5CZF8_9LAMI (Photosystem II reaction center protein T OS=Premna microphylla OX=54469 GN=psbT PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-09
Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAKFFL 39
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK KF L
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKIKFQL 38

[Close]

BLAST of BhiUN32G18 vs. TrEMBL
Match: tr|A0A1D8D8L4|A0A1D8D8L4_9MAGN (Photosystem II reaction center protein T OS=Aconitum kusnezoffii OX=239685 GN=psbT PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 35

[Close]

BLAST of BhiUN32G18 vs. TrEMBL
Match: tr|X2F3J7|X2F3J7_LAGSI (Photosystem II reaction center protein T OS=Lagenaria siceraria OX=3668 GN=psbT PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 4  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 38

[Close]

BLAST of BhiUN32G18 vs. TrEMBL
Match: tr|A0A023HNF7|A0A023HNF7_9MAGN (Photosystem II reaction center protein T OS=Aconitum barbatum var. puberulum OX=1045223 GN=psbT PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 35

[Close]

BLAST of BhiUN32G18 vs. NCBI nr
Match: YP_002608392.1 (PSII T-protein [Vitis vinifera] >CAQ77647.1 PSII T-protein (mitochondrion) [Vitis vinifera] >ACS15206.1 PSII T protein (mitochondrion) [Vitis vinifera])

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-09
Identity = 38/47 (80.85%), Postives = 38/47 (80.85%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAKFFLITSTSPRVP 48
          MEALVYTFLLVSTLGIIFFAIFFREPPK  TKK KFF I S S   P
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKEKTKKMKFFFIISISVMSP 47

[Close]

BLAST of BhiUN32G18 vs. NCBI nr
Match: YP_009117248.1 (photosystem II protein T (chloroplast) [Premna microphylla] >AJE28402.1 photosystem II protein T (chloroplast) [Premna microphylla])

HSP 1 Score: 69.3 bits (168), Expect = 5.9e-09
Identity = 36/38 (94.74%), Postives = 36/38 (94.74%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAKFFL 39
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKK KF L
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKIKFQL 38

[Close]

BLAST of BhiUN32G18 vs. NCBI nr
Match: YP_009326016.1 (photosystem II protein T (chloroplast) [Citrullus lanatus] >YP_009348058.1 photosystem II protein T (plastid) [Citrullus mucosospermus] >AHM88727.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM88786.1 photosystem II protein T, partial (chloroplast) [Lagenaria siceraria] >AHM88901.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89017.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89076.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89135.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89194.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89253.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89313.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89372.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89431.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89490.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89550.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89609.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89668.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89727.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89786.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89845.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89904.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM89963.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90022.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90081.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90140.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90199.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90258.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90317.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90376.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90435.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90494.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90553.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90612.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90671.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90730.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90789.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90848.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90907.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM90966.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM91025.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM91084.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM91142.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AHM91317.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >ALO21751.1 PsbT (plastid) [Cucurbita argyrosperma] >ALO21789.1 PsbT (plastid) [Cucurbita argyrosperma var. palmeri] >ALO21883.1 PsbT (plastid) [Cucurbita argyrosperma subsp. sororia] >ALO21946.1 PsbT (plastid) [Cucurbita cordata] >ALO21968.1 PsbT (plastid) [Cucurbita digitata] >ALO22078.1 PsbT (plastid) [Cucurbita ecuadorensis] >ALO22111.1 PsbT (plastid) [Cucurbita ficifolia] >ALO22182.1 PsbT (plastid) [Cucurbita foetidissima] >ALO22250.1 PsbT (plastid) [Cucurbita lundelliana] >ALO22309.1 PsbT (plastid) [Cucurbita maxima subsp. andreana] >ALO22371.1 PsbT (plastid) [Cucurbita moschata] >ALO22425.1 PsbT (plastid) [Cucurbita okeechobeensis] >ALO22516.1 PsbT (plastid) [Cucurbita okeechobeensis subsp. martinezii] >ALO22552.1 PsbT (plastid) [Cucurbita pepo subsp. fraterna] >ALO22655.1 PsbT (plastid) [Cucurbita pepo subsp. ovifera] >ALO22716.1 PsbT (plastid) [Cucurbita pepo var. ozarkana] >ALO22798.1 PsbT (plastid) [Cucurbita pepo subsp. pepo] >ALO22848.1 PsbT (plastid) [Cucurbita pepo var. texana] >ALO22918.1 PsbT (plastid) [Cucurbita pedatifolia] >APD52507.1 photosystem II protein T (chloroplast) [Citrullus lanatus] >APW82489.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW82574.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW82659.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW82744.1 photosystem II protein T (plastid) [Citrullus mucosospermus] >APW82829.1 photosystem II protein T (plastid) [Citrullus mucosospermus] >APW82914.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW82999.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW83084.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW83169.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW83254.1 photosystem II protein T (plastid) [Citrullus lanatus subsp. vulgaris] >APW83339.1 photosystem II protein T (plastid) [Citrullus mucosospermus])

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 4  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 38

[Close]

BLAST of BhiUN32G18 vs. NCBI nr
Match: YP_009169379.1 (photosystem II protein T (chloroplast) [Clematis terniflora] >YP_009243057.1 photosystem II protein T (chloroplast) [Aconitum chiisanense] >YP_009271065.1 photosystem II protein T (chloroplast) [Aconitum carmichaelii] >YP_009308105.1 photosystem II protein T (chloroplast) [Aconitum austrokoreense] >YP_009308502.1 photosystem II protein T (chloroplast) [Aconitum ciliare] >YP_009308588.1 photosystem II protein T (chloroplast) [Aconitum coreanum] >YP_009308673.1 photosystem II protein T (chloroplast) [Aconitum kusnezoffii] >YP_009308758.1 photosystem II protein T (chloroplast) [Aconitum monanthum] >YP_009310545.1 photosystem II protein T (chloroplast) [Cabomba caroliniana] >YP_009317413.1 photosystem II protein T (chloroplast) [Coccinia grandis] >YP_009338188.1 photosystem II protein T (chloroplast) [Gymnaconitum gymnandrum] >YP_009346511.1 photosystem II protein T (chloroplast) [Cucumis x hytivus] >YP_009420821.1 photosystem II protein T (chloroplast) [Citrullus colocynthis] >YP_009428734.1 PsbT (chloroplast) [Aconitum pseudolaeve] >YP_009428647.1 PsbT (chloroplast) [Aconitum longecassidatum] >YP_009431584.1 photosystem II protein T (chloroplast) [Citrullus amarus] >YP_009431669.1 photosystem II protein T (chloroplast) [Citrullus rehmii] >YP_009443636.1 photosystem II protein T (chloroplast) [Aconitum angustius] >YP_009443718.1 photosystem II protein T (chloroplast) [Aconitum finetianum] >YP_009443800.1 photosystem II protein T (chloroplast) [Aconitum sinomontanum] >YP_009446098.1 photosystem II protein T (chloroplast) [Coptis chinensis] >YP_009447477.1 photosystem II protein T (chloroplast) [Cucurbita maxima] >YP_009447562.1 photosystem II protein T (chloroplast) [Cucurbita moschata] >YP_009456173.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >YP_009486238.1 photosystem II protein T (chloroplast) [Coptis quinquesecta] >YP_009499785.1 PSII T protein (chloroplast) [Aconitum vilmorinianum] >YP_009499870.1 PSII T protein (chloroplast) [Aconitum hemsleyanum] >YP_009499955.1 PSII T protein (chloroplast) [Aconitum episcopale] >YP_009500040.1 PSII T protein (chloroplast) [Aconitum delavayi] >YP_009500125.1 PSII T protein (chloroplast) [Aconitum contortum] >YP_009505107.1 photosystem II protein T (chloroplast) [Cucurbita pepo] >Q9GFA4.1 RecName: Full=Photosystem II reaction center protein T; Short=PSII-T >AAG26258.1 photosystem II subunit (chloroplast) [Cabomba caroliniana] >ABY85591.1 PSII T protein (chloroplast) [Silene integripetala] >AEH26854.1 photosystem II subunit T (chloroplast) [Jacquemontia reclinata] >AGN74006.1 photosystem II protein T (chloroplast) [Aconitum barbatum var. puberulum] >AIQ81120.1 photosystem II protein T (chloroplast) [Clematis terniflora] >AIZ57555.1 photosystem II protein T (chloroplast) [Clematis fusca var. coreana] >AJP62632.1 photosystem II subunit (chloroplast) [Tribulus terrestris] >AKM98153.1 photosystem II protein T (chloroplast) [Anemone patens] >AKM98241.1 photosystem II protein T (chloroplast) [Anemone patens] >AKM98329.1 photosystem II protein T (chloroplast) [Pulsatilla pratensis] >AKM98417.1 photosystem II protein T (chloroplast) [Pulsatilla pratensis] >AKM98505.1 photosystem II protein T (chloroplast) [Pulsatilla vernalis] >AKM98593.1 photosystem II protein T (chloroplast) [Pulsatilla vernalis] >AMQ99367.1 photosystem II protein T (chloroplast) [Aconitum chiisanense] >ANA10807.1 photosystem II protein T (chloroplast) [Cabomba caroliniana] >ANJ04416.1 photosystem II protein T (chloroplast) [Aconitum kusnezoffii] >ANJ04500.1 photosystem II protein T (chloroplast) [Gymnaconitum gymnandrum] >ANJ04582.1 photosystem II protein T (chloroplast) [Aconitum barbatum var. puberulum] >ANU80296.1 photosystem II protein T (chloroplast) [Aconitum carmichaelii] >ANV27780.1 PsbT (chloroplast) [Aconitum coreanum] >ANY59832.1 PsbT (chloroplast) [Aconitum volubile] >AOS52952.1 photosystem II protein T (chloroplast) [Aconitum austrokoreense] >AOS85816.1 photosystem II protein T (chloroplast) [Aconitum barbatum var. hispidum] >AOS85901.1 photosystem II protein T (chloroplast) [Aconitum ciliare] >AOS85987.1 photosystem II protein T (chloroplast) [Aconitum coreanum] >AOS86072.1 photosystem II protein T (chloroplast) [Aconitum jaluense subsp. jaluense] >AOS86157.1 photosystem II protein T (chloroplast) [Aconitum jaluense subsp. jaluense] >AOS86242.1 photosystem II protein T (chloroplast) [Aconitum japonicum subsp. napiforme] >AOS86327.1 photosystem II protein T (chloroplast) [Aconitum kusnezoffii] >AOS86412.1 photosystem II protein T (chloroplast) [Aconitum monanthum] >AOW71122.1 photosystem II protein T (chloroplast) [Cucumis x hytivus] >AOX48790.1 photosystem II protein T (chloroplast) [Coccinia grandis] >AOX48875.1 photosystem II protein T (chloroplast) [Coccinia grandis] >APD16169.1 PsbT (chloroplast) [Alhagi sparsifolia] >AQY55981.1 PsbT (chloroplast) [Aconitum austrokoreense] >AQY56067.1 PsbT (chloroplast) [Aconitum carmichaelii] >AQY56154.1 PsbT (chloroplast) [Aconitum longecassidatum] >AQY56241.1 PsbT (chloroplast) [Aconitum pseudolaeve] >ARQ81348.1 photosystem II protein T (chloroplast) [Aconitum carmichaelii] >ARX96552.1 photosystem II protein T (chloroplast) [Coptis chinensis] >ASP44489.1 photosystem II protein T (chloroplast) [Citrullus colocynthis] >ASY96187.1 photosystem II protein T (chloroplast) [Citrullus amarus] >ASY96275.1 photosystem II protein T (chloroplast) [Citrullus rehmii] >ATU06836.1 photosystem II protein T (chloroplast) [Aconitum angustius] >ATU06918.1 photosystem II protein T (chloroplast) [Aconitum finetianum] >ATU07000.1 photosystem II protein T (chloroplast) [Aconitum sinomontanum] >ATY69898.1 photosystem II protein T (chloroplast) [Cucurbita maxima] >ATY69980.1 photosystem II protein T (chloroplast) [Cucurbita moschata] >AUB29899.1 photosystem II protein T (chloroplast) [Aconitum reclinatum] >AUD56512.1 PsbT (chloroplast) [Cabomba caroliniana] >AUJ21938.1 photosystem II protein T (chloroplast) [Lagenaria siceraria] >AWB12381.1 photosystem II protein T (chloroplast) [Coptis quinquesecta] >AWX90375.1 photosystem II protein T (chloroplast) [Cucurbita pepo] >AXC46721.1 PSII T protein (chloroplast) [Aconitum vilmorinianum] >AXC46807.1 PSII T protein (chloroplast) [Aconitum hemsleyanum] >AXC46892.1 PSII T protein (chloroplast) [Aconitum episcopale] >AXC46976.1 PSII T protein (chloroplast) [Aconitum delavayi] >AXC47062.1 PSII T protein (chloroplast) [Aconitum contortum] >AXP20338.1 photosystem II protein T (chloroplast) [Anemone trullifolia] >AXP21724.1 photosystem II protein T (chloroplast) [Anemone henryi] >AXP21815.1 photosystem II protein T (chloroplast) [Pulsatilla chinensis] >AXP85442.1 photosystem II protein T (chloroplast) [Clematis alternata] >AXP85533.1 photosystem II protein T (chloroplast) [Clematis repens] >AXP85623.1 photosystem II protein T (chloroplast) [Clematis brevicaudata] >AXP85712.1 photosystem II protein T (chloroplast) [Naravelia zeylanica])

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 35

[Close]

BLAST of BhiUN32G18 vs. NCBI nr
Match: AXP21638.1 (photosystem II protein T (chloroplast) [Anemone tomentosa])

HSP 1 Score: 68.9 bits (167), Expect = 7.7e-09
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 36
          MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK
Sbjct: 4  MEALVYTFLLVSTLGIIFFAIFFREPPKVPTKKAK 38

The following BLAST results are available for this feature:

BLAST of BhiUN32G18 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00690.1	1.7e-10	93.94	photosystem II reaction center protein T	[more]

BLAST of BhiUN32G18 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9GFA4\|PSBT_CABCA	2.5e-11	100.00	Photosystem II reaction center protein T OS=Cabomba caroliniana OX=4426 GN=psbT ...	[more]
sp\|Q09MF0\|PSBT_CITSI	7.3e-11	97.14	Photosystem II reaction center protein T OS=Citrus sinensis OX=2711 GN=psbT PE=3...	[more]
sp\|Q49KX1\|PSBT_EUCGG	7.3e-11	97.14	Photosystem II reaction center protein T OS=Eucalyptus globulus subsp. globulus ...	[more]
sp\|Q7HIW5\|PSBT_HYDCA	7.3e-11	97.14	Photosystem II reaction center protein T OS=Hydrastis canadensis OX=13569 GN=psb...	[more]
sp\|Q06RA5\|PSBT_JASNU	7.3e-11	97.14	Photosystem II reaction center protein T OS=Jasminum nudiflorum OX=126431 GN=psb...	[more]

BLAST of BhiUN32G18 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|B6VJY0\|B6VJY0_VITVI	2.3e-09	80.85	PSII T-protein OS=Vitis vinifera OX=29760 GN=psbT PE=3 SV=1	[more]
tr\|A0A0B5CZF8\|A0A0B5CZF8_9LAMI	3.9e-09	94.74	Photosystem II reaction center protein T OS=Premna microphylla OX=54469 GN=psbT ...	[more]
tr\|A0A1D8D8L4\|A0A1D8D8L4_9MAGN	5.1e-09	100.00	Photosystem II reaction center protein T OS=Aconitum kusnezoffii OX=239685 GN=ps...	[more]
tr\|X2F3J7\|X2F3J7_LAGSI	5.1e-09	100.00	Photosystem II reaction center protein T OS=Lagenaria siceraria OX=3668 GN=psbT ...	[more]
tr\|A0A023HNF7\|A0A023HNF7_9MAGN	5.1e-09	100.00	Photosystem II reaction center protein T OS=Aconitum barbatum var. puberulum OX=...	[more]

BLAST of BhiUN32G18 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_002608392.1	3.5e-09	80.85	PSII T-protein [Vitis vinifera] >CAQ77647.1 PSII T-protein (mitochondrion) [Viti...	[more]
YP_009117248.1	5.9e-09	94.74	photosystem II protein T (chloroplast) [Premna microphylla] >AJE28402.1 photosys...	[more]
YP_009326016.1	7.7e-09	100.00	photosystem II protein T (chloroplast) [Citrullus lanatus] >YP_009348058.1 photo...	[more]
YP_009169379.1	7.7e-09	100.00	photosystem II protein T (chloroplast) [Clematis terniflora] >YP_009243057.1 pho...	[more]
AXP21638.1	7.7e-09	100.00	photosystem II protein T (chloroplast) [Anemone tomentosa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009539	photosystem II reaction center
GO:0009523	photosystem II
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR037268	PSII_PsbT_sf
IPR001743	PSII_PsbT

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009539	photosystem II reaction center
cellular_component	GO:0016020	membrane
cellular_component	GO:0009523	photosystem II

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN32M18	BhiUN32M18	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001743	Photosystem II PsbT	PFAM	PF01405	PsbT	coord: 1..28 e-value: 5.9E-18 score: 64.3
IPR001743	Photosystem II PsbT	PANTHER	PTHR36411	FAMILY NOT NAMED	coord: 1..33
IPR001743	Photosystem II PsbT	PRODOM	PD004453		coord: 1..29 e-value: 2.0E-9 score: 142.0
IPR001743	Photosystem II PsbT	HAMAP	MF_00808	PSII_PsbT	coord: 1..31 score: 15.004
None	No IPR available	PANTHER	PTHR36411:SF2	PHOTOSYSTEM II REACTION CENTER PROTEIN T	coord: 1..33
IPR037268	Photosystem II PsbT superfamily	SUPERFAMILY	SSF161029	Photosystem II reaction center protein T, PsbT	coord: 1..29

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
BhiUN32G18	Cucumber (Gy14) v1	cgywgoB121
BhiUN32G18	Cucumber (Gy14) v2	cgybwgoB208
BhiUN32G18	Cucurbita maxima (Rimu)	cmawgoB0975
BhiUN32G18	Cucurbita moschata (Rifu)	cmowgoB0971
BhiUN32G18	Wild cucumber (PI 183967)	cpiwgoB217
BhiUN32G18	Cucumber (Chinese Long) v3	cucwgoB222
BhiUN32G18	Cucumber (Chinese Long) v2	cuwgoB217
BhiUN32G18	Bottle gourd (USVL1VR-Ls)	lsiwgoB146
BhiUN32G18	Melon (DHL92) v3.6.1	medwgoB497
BhiUN32G18	Melon (DHL92) v3.5.1	mewgoB497
BhiUN32G18	Watermelon (Charleston Gray)	wcgwgoB324
BhiUN32G18	Watermelon (97103) v2	wgowmbB668
BhiUN32G18	Watermelon (97103) v1	wgowmB692