Bhi01M002183 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCCTTGAGGTCTTTTACAATGCCCACAAAGCTGTACTTCATCCAACAGGTCCACTTCTTGATCAAGAAACTCAGACTCTAAAGCCTAGGTGTGTCCGGACGTTGAAACGAATATTTATTCTTTATGATCATGATAAAGACGGTGCTTTGAGTGATGCGGAGTTGAATCATTTTCAGGTCTTCCTGTCCGTCCACAATTTTTTTGGCAAACACCTTATAAATTTTTTATTATTTGTAATATTTGTGCCTGCAATGGCTGACTTGACTCTATGGAGCTCTTATTATTGTTATTTTTTTGTTAATCTTGTAATCAGGTTAAATGTTTCAATGCTCCTTTACAACCTTCTGAAATTGTGGGGGTTAAGAGGGTTGTGCAAGAAAAACTTACTGAAGGAGTGAATGATCATGGGCTCACTTTGACAAGGTTCCTCTTTCTTCATGCTTTATTGATTGAGAAGGGGCGTTTAGAGATAACATGGACTGTGCTCAGGAAGTTTGGATACAATAATGATATCAAACTTGCGGATGAACTTGTGTGGTCAACTGTTTTGCATCCACTATTTGTTGTTGAACTAGTAGAAATTTAG ATCCTTGAGGTCTTTTACAATGCCCACAAAGCTGTACTTCATCCAACAGGTCCACTTCTTGATCAAGAAACTCAGACTCTAAAGCCTAGGTGTGTCCGGACGTTGAAACGAATATTTATTCTTTATGATCATGATAAAGACGGTGCTTTGAGTGATGCGGAGTTGAATCATTTTCAGGTTAAATGTTTCAATGCTCCTTTACAACCTTCTGAAATTGTGGGGGTTAAGAGGGTTGTGCAAGAAAAACTTACTGAAGGAGTGAATGATCATGGGCTCACTTTGACAAGGTTCCTCTTTCTTCATGCTTTATTGATTGAGAAGGGGCGTTTAGAGATAACATGGACTGTGCTCAGGAAGTTTGGATACAATAATGATATCAAACTTGCGGATGAACTTGTGTGGTCAACTGTTTTGCATCCACTATTTGTTGTTGAACTAGTAGAAATTTAG ATCCTTGAGGTCTTTTACAATGCCCACAAAGCTGTACTTCATCCAACAGGTCCACTTCTTGATCAAGAAACTCAGACTCTAAAGCCTAGGTGTGTCCGGACGTTGAAACGAATATTTATTCTTTATGATCATGATAAAGACGGTGCTTTGAGTGATGCGGAGTTGAATCATTTTCAGGTTAAATGTTTCAATGCTCCTTTACAACCTTCTGAAATTGTGGGGGTTAAGAGGGTTGTGCAAGAAAAACTTACTGAAGGAGTGAATGATCATGGGCTCACTTTGACAAGGTTCCTCTTTCTTCATGCTTTATTGATTGAGAAGGGGCGTTTAGAGATAACATGGACTGTGCTCAGGAAGTTTGGATACAATAATGATATCAAACTTGCGGATGAACTTGTGTGGTCAACTGTTTTGCATCCACTATTTGTTGTTGAACTAGTAGAAATTTAG ILEVFYNAHKAVLHPTGPLLDQETQTLKPRCVRTLKRIFILYDHDKDGALSDAELNHFQVKCFNAPLQPSEIVGVKRVVQEKLTEGVNDHGLTLTRFLFLHALLIEKGRLEITWTVLRKFGYNNDIKLADELVWSTVLHPLFVVELVEI
BLAST of Bhi01M002183 vs. TAIR10
Match: AT5G27540.1 (MIRO-related GTP-ase 1) HSP 1 Score: 226.5 bits (576), Expect = 1.1e-59 Identity = 108/135 (80.00%), Postives = 119/135 (88.15%), Query Frame = 0
BLAST of Bhi01M002183 vs. TAIR10
Match: AT3G63150.1 (MIRO-related GTP-ase 2) HSP 1 Score: 168.3 bits (425), Expect = 3.5e-42 Identity = 82/131 (62.60%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Bhi01M002183 vs. TAIR10
Match: AT3G05310.1 (MIRO-related GTP-ase 3) HSP 1 Score: 162.5 bits (410), Expect = 1.9e-40 Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of Bhi01M002183 vs. Swiss-Prot
Match: sp|Q8RXF8|MIRO1_ARATH (Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana OX=3702 GN=MIRO1 PE=1 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.0e-58 Identity = 108/135 (80.00%), Postives = 119/135 (88.15%), Query Frame = 0
BLAST of Bhi01M002183 vs. Swiss-Prot
Match: sp|F4J0W4|MIRO2_ARATH (Mitochondrial Rho GTPase 2 OS=Arabidopsis thaliana OX=3702 GN=MIRO2 PE=2 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 6.4e-41 Identity = 82/131 (62.60%), Postives = 98/131 (74.81%), Query Frame = 0
BLAST of Bhi01M002183 vs. Swiss-Prot
Match: sp|Q9MA88|MIRO3_ARATH (Mitochondrial Rho GTPase 3 OS=Arabidopsis thaliana OX=3702 GN=MIRO3 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.5e-39 Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of Bhi01M002183 vs. Swiss-Prot
Match: sp|Q6NVC5|MIRO1_DANRE (Mitochondrial Rho GTPase 1-A OS=Danio rerio OX=7955 GN=rhot1a PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 4.6e-39 Identity = 78/144 (54.17%), Postives = 99/144 (68.75%), Query Frame = 0
BLAST of Bhi01M002183 vs. Swiss-Prot
Match: sp|Q5ZM73|MIRO1_CHICK (Mitochondrial Rho GTPase 1 OS=Gallus gallus OX=9031 GN=RHOT1 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38 Identity = 74/138 (53.62%), Postives = 98/138 (71.01%), Query Frame = 0
BLAST of Bhi01M002183 vs. TrEMBL
Match: tr|A0A0A0LIM9|A0A0A0LIM9_CUCSA (Mitochondrial Rho GTPase OS=Cucumis sativus OX=3659 GN=Csa_2G021700 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.4e-61 Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of Bhi01M002183 vs. TrEMBL
Match: tr|W9T1N4|W9T1N4_9ROSA (Mitochondrial Rho GTPase OS=Morus notabilis OX=981085 GN=L484_000800 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 7.1e-61 Identity = 118/133 (88.72%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of Bhi01M002183 vs. TrEMBL
Match: tr|A0A1S3BYW1|A0A1S3BYW1_CUCME (Mitochondrial Rho GTPase OS=Cucumis melo OX=3656 GN=LOC103495076 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.2e-60 Identity = 118/133 (88.72%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of Bhi01M002183 vs. TrEMBL
Match: tr|A6YTD0|A6YTD0_CUCME (Mitochondrial Rho GTPase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.2e-60 Identity = 118/133 (88.72%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of Bhi01M002183 vs. TrEMBL
Match: tr|A0A2P5DSX8|A0A2P5DSX8_PARAD (Mitochondrial Rho GTPase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_034440 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.5e-60 Identity = 117/135 (86.67%), Postives = 122/135 (90.37%), Query Frame = 0
BLAST of Bhi01M002183 vs. NCBI nr
Match: XP_004139182.2 (PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus] >KGN60899.1 hypothetical protein Csa_2G021700 [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 119/133 (89.47%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of Bhi01M002183 vs. NCBI nr
Match: XP_022150764.1 (mitochondrial Rho GTPase 1-like [Momordica charantia]) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 120/133 (90.23%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of Bhi01M002183 vs. NCBI nr
Match: XP_022937996.1 (mitochondrial Rho GTPase 1-like [Cucurbita moschata]) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 118/133 (88.72%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of Bhi01M002183 vs. NCBI nr
Match: XP_022946756.1 (mitochondrial Rho GTPase 1-like [Cucurbita moschata]) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 120/133 (90.23%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of Bhi01M002183 vs. NCBI nr
Match: XP_022999265.1 (mitochondrial Rho GTPase 1-like [Cucurbita maxima]) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 120/133 (90.23%), Postives = 121/133 (90.98%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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