BhiUN179M10 (mRNA) Wax gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGGGAATTGTGGGAGCATTAAATATAAGGCAATATATATTGAGTCATTGGAAAAGGAAGCGTTGGCTTTTGGTATCTGCCGAATAATGACTTTACGCCGTCTAATTCATGAAATCATTCTAACCCAATTTCAGAAATGAACCCCGCCTCCGCCTCCGCCCCGCCCCCGCCATCGTATTCTCCAATCCCCTCCTCCTCCGCCCTTCTCTATGGTCCCCGCCACCGCCGACTCCCCTCTCCCCCCTCCTCCAAGCGCAATAAACTGGCTCTCCACCGCCACCACCCCCTTTCGCCGCTCCTCCCTGGCCTCCCCGATCACGTCGCCCAATTCTGCCTCTCCCATCTCCCCCCTTCTCTCCTCTTCTCCGTCTGCCGTTCATGGCGGGCCTCCTCTATTCCCCTTCTTTTCCCCCTTTCTCCTCCCTATACGCCCTTCTTTCTTCCTCCTCTAATTCCCTCGATTTCTTCAATTTCGATCCAATCTCTTCAAAATGGACCCCTCTCCCTCCTCCTCCCAATTCCCATCTCTTGATCCACCACCCTTCTTTCCTCTCCCGCCACCTCCCTGTTCAATCCCTCACCGTCTCCGGCCACCTCCTCCTCCTCGCCGCCACCACCCACAACCTCCTCCCCGCCCTCCCTCGCCCTCTCCTCTTCTCCCCCTTTTCCAATTCCTGGCGTTTCGCCCCTCCTCTCCCTACCCCTCGCCGTTGGTGCGCTGCCGGCGCTCTCCGTGGCTCTGTTTATGTCGCTAGTGGGATTGGATCCTTCTTCTCCACTGATGTAGCTCGATCTGTTGAGAGATGGGATTTGAAACCCAACGGTGGTGGTGGTTGGGAGAAGGTGTGTGGGCTTAAGGATGGGAGATTTAGTAGAGACGCCATTGATGCTGTGGGATGGAAAGGGAAGCTCTGTATGGTGAATGTGAAAGGGGATGCGCCGAAAGAAGGGTTGGTTTATGATTTGGAAAGGGGTGAGTGGGAGGAGATGCCGGAAGGGATGATCGGAGGATGGAGAGGGCCGGCGGCGGCCATGGATGAGGAAGAGATGTATGTGGTGGATGAAGTTAGTGGAAGTTTGAGAAGGTATGATTCAGAAACGGATTTCTGGGAGGAGGTAATGGCGTCGAATCGGTTGAAAGGGGCGGTGCAGATGGCGGCCGGCGGCGGCAGAGTCTGCGTCGTTTGCGGTGGTAGTAGAGGGGAAATCGTCGTGGTGGATGTGGTAGCGTCGCCGCCGCGGTTGTGGGTTGAGGCGACGCCGCCGGGAACGGAGGTTGTCGCCGTCCACGTGCTGCCGAGAATGAATGGTGCTGCAGAGTCATGATCGTCCGTCGGTTACAGCCAGGAAGTGATTTTTTTTTTTTTTTTTTTTTTTGAATATTGCGTTCTTGTTTAATATATTAATAGAAAGATAATACGAAGAATTTAGACCCAAAGATTTTGTTTTAAGTTTTTATTTTTAAAAATTAAGTTTATAACATTTACTTTTTTTTACTCGATTTAGATGAATTTTTAGTCCAATTTTAAGAATAAAAATATTTTTTTTTAAATATTTTTTTTTTATTTTTAAAATTAAGCTTGATTTTTTAAATCATCGATGAAAATTATATAATAAATGAAGAAATAAAGAAATAAAGAAATTTAGAAATAGGAGTAACATTTAAGAATTTAATTTTTTAAAATAAAAATAAAAGATAAAATAATTATCACCTAATTAATTAATTAATATATATATATATATATATTGGTGAAAGTAAAGGAAAAGTGAAAATTTGTGGGTTCAAAGAAGAGCAGTTGTTATTGGTTTGAGTTGGTGAACTATTCCCTATTCAAGGTCTTTAAGTTCCCTTTTGGGAAGAATATTTTAACCTTTTTTTTTAATAATCAAATTTTTAAAATTTTGTTTATTTAGAAAATGATGATCAAAACTAAGAAATGAGATACAAATTCATACTCCACTGTGGATGAAAAAAGAGTTAGGATAATTATTGATATAATTAAATTTGATAGTCAATCGATAATTTAATAATCATTTTATTATCATTTTTAGTTTGACATTTGTGAGGGAAGCATAAATTTAAGATGGTAATATATGCTTTACTTTGATGAGTTATATATGTTGATTAATTTGTTATTTGTTTATTTAATTGAATGAGGACGTGAGATTGGTATTGATCTTTAAAATAATGAAAAGGTATTTGTGAGATTAGTATAGATTATTTGAGCTATAATTAAAATTTGAAAGTTTTAAAATCATTCTTAAATTTGGTCTTAAAATGAGATTGGGATACAGTTTTAGTTATGTATTCGTTTTTACTCTCGAGCTCAAATTTAGTTTATTTAGTCTCAAATTTAAATTTAGTCTTTATTCTCAATTTTAGATTTATAGTAGCGTACGAGGATGGATCTATAAAAGGATCAAAGACACATACCCCT AAAGGGAATTGTGGGAGCATTAAATATAAGGCAATATATATTGAGTCATTGGAAAAGGAAGCGTTGGCTTTTGGTATCTGCCGAATAATGACTTTACGCCGTCTAATTCATGAAATCATTCTAACCCAATTTCAGAAATGAACCCCGCCTCCGCCTCCGCCCCGCCCCCGCCATCGTATTCTCCAATCCCCTCCTCCTCCGCCCTTCTCTATGGTCCCCGCCACCGCCGACTCCCCTCTCCCCCCTCCTCCAAGCGCAATAAACTGGCTCTCCACCGCCACCACCCCCTTTCGCCGCTCCTCCCTGGCCTCCCCGATCACGTCGCCCAATTCTGCCTCTCCCATCTCCCCCCTTCTCTCCTCTTCTCCGTCTGCCGTTCATGGCGGGCCTCCTCTATTCCCCTTCTTTTCCCCCTTTCTCCTCCCTATACGCCCTTCTTTCTTCCTCCTCTAATTCCCTCGATTTCTTCAATTTCGATCCAATCTCTTCAAAATGGACCCCTCTCCCTCCTCCTCCCAATTCCCATCTCTTGATCCACCACCCTTCTTTCCTCTCCCGCCACCTCCCTGTTCAATCCCTCACCGTCTCCGGCCACCTCCTCCTCCTCGCCGCCACCACCCACAACCTCCTCCCCGCCCTCCCTCGCCCTCTCCTCTTCTCCCCCTTTTCCAATTCCTGGCGTTTCGCCCCTCCTCTCCCTACCCCTCGCCGTTGGTGCGCTGCCGGCGCTCTCCGTGGCTCTGTTTATGTCGCTAGTGGGATTGGATCCTTCTTCTCCACTGATGTAGCTCGATCTGTTGAGAGATGGGATTTGAAACCCAACGGTGGTGGTGGTTGGGAGAAGGTGTGTGGGCTTAAGGATGGGAGATTTAGTAGAGACGCCATTGATGCTGTGGGATGGAAAGGGAAGCTCTGTATGGTGAATGTGAAAGGGGATGCGCCGAAAGAAGGGTTGGTTTATGATTTGGAAAGGGGTGAGTGGGAGGAGATGCCGGAAGGGATGATCGGAGGATGGAGAGGGCCGGCGGCGGCCATGGATGAGGAAGAGATGTATGTGGTGGATGAAGTTAGTGGAAGTTTGAGAAGGTATGATTCAGAAACGGATTTCTGGGAGGAGGTAATGGCGTCGAATCGGTTGAAAGGGGCGGTGCAGATGGCGGCCGGCGGCGGCAGAGTCTGCGTCGTTTGCGGTGGTAGTAGAGGGGAAATCGTCGTGGTGGATGTGGTAGCGTCGCCGCCGCGGTTGTGGGTTGAGGCGACGCCGCCGGGAACGGAGGTTGTCGCCGTCCACGTGCTGCCGAGAATGAATGGTGCTGCAGAGTCATGATCGTCCGTCGGTTACAGCCAGGAAGTGATTTTTTTTTTTTTTTTTTTTTTTGAATATTGCGTTCTTGTTTAATATATTAATAGAAAGATAATACGAAGAATTTAGACCCAAAGATTTTGTTTTAAGTTTTTATTTTTAAAAATTAAGTTTATAACATTTACTTTTTTTTACTCGATTTAGATGAATTTTTAGTCCAATTTTAAGAATAAAAATATTTTTTTTTAAATATTTTTTTTTTATTTTTAAAATTAAGCTTGATTTTTTAAATCATCGATGAAAATTATATAATAAATGAAGAAATAAAGAAATAAAGAAATTTAGAAATAGGAGTAACATTTAAGAATTTAATTTTTTAAAATAAAAATAAAAGATAAAATAATTATCACCTAATTAATTAATTAATATATATATATATATATATTGGTGAAAGTAAAGGAAAAGTGAAAATTTGTGGGTTCAAAGAAGAGCAGTTGTTATTGGTTTGAGTTGGTGAACTATTCCCTATTCAAGGTCTTTAAGTTCCCTTTTGGGAAGAATATTTTAACCTTTTTTTTTAATAATCAAATTTTTAAAATTTTGTTTATTTAGAAAATGATGATCAAAACTAAGAAATGAGATACAAATTCATACTCCACTGTGGATGAAAAAAGAGTTAGGATAATTATTGATATAATTAAATTTGATAGTCAATCGATAATTTAATAATCATTTTATTATCATTTTTAGTTTGACATTTGTGAGGGAAGCATAAATTTAAGATGGTAATATATGCTTTACTTTGATGAGTTATATATGTTGATTAATTTGTTATTTGTTTATTTAATTGAATGAGGACGTGAGATTGGTATTGATCTTTAAAATAATGAAAAGGTATTTGTGAGATTAGTATAGATTATTTGAGCTATAATTAAAATTTGAAAGTTTTAAAATCATTCTTAAATTTGGTCTTAAAATGAGATTGGGATACAGTTTTAGTTATGTATTCGTTTTTACTCTCGAGCTCAAATTTAGTTTATTTAGTCTCAAATTTAAATTTAGTCTTTATTCTCAATTTTAGATTTATAGTAGCGTACGAGGATGGATCTATAAAAGGATCAAAGACACATACCCCT ATGGCGGGCCTCCTCTATTCCCCTTCTTTTCCCCCTTTCTCCTCCCTATACGCCCTTCTTTCTTCCTCCTCTAATTCCCTCGATTTCTTCAATTTCGATCCAATCTCTTCAAAATGGACCCCTCTCCCTCCTCCTCCCAATTCCCATCTCTTGATCCACCACCCTTCTTTCCTCTCCCGCCACCTCCCTGTTCAATCCCTCACCGTCTCCGGCCACCTCCTCCTCCTCGCCGCCACCACCCACAACCTCCTCCCCGCCCTCCCTCGCCCTCTCCTCTTCTCCCCCTTTTCCAATTCCTGGCGTTTCGCCCCTCCTCTCCCTACCCCTCGCCGTTGGTGCGCTGCCGGCGCTCTCCGTGGCTCTGTTTATGTCGCTAGTGGGATTGGATCCTTCTTCTCCACTGATGTAGCTCGATCTGTTGAGAGATGGGATTTGAAACCCAACGGTGGTGGTGGTTGGGAGAAGGTGTGTGGGCTTAAGGATGGGAGATTTAGTAGAGACGCCATTGATGCTGTGGGATGGAAAGGGAAGCTCTGTATGGTGAATGTGAAAGGGGATGCGCCGAAAGAAGGGTTGGTTTATGATTTGGAAAGGGGTGAGTGGGAGGAGATGCCGGAAGGGATGATCGGAGGATGGAGAGGGCCGGCGGCGGCCATGGATGAGGAAGAGATGTATGTGGTGGATGAAGTTAGTGGAAGTTTGAGAAGGTATGATTCAGAAACGGATTTCTGGGAGGAGGTAATGGCGTCGAATCGGTTGAAAGGGGCGGTGCAGATGGCGGCCGGCGGCGGCAGAGTCTGCGTCGTTTGCGGTGGTAGTAGAGGGGAAATCGTCGTGGTGGATGTGGTAGCGTCGCCGCCGCGGTTGTGGGTTGAGGCGACGCCGCCGGGAACGGAGGTTGTCGCCGTCCACGTGCTGCCGAGAATGAATGGTGCTGCAGAGTCATGA MAGLLYSPSFPPFSSLYALLSSSSNSLDFFNFDPISSKWTPLPPPPNSHLLIHHPSFLSRHLPVQSLTVSGHLLLLAATTHNLLPALPRPLLFSPFSNSWRFAPPLPTPRRWCAAGALRGSVYVASGIGSFFSTDVARSVERWDLKPNGGGGWEKVCGLKDGRFSRDAIDAVGWKGKLCMVNVKGDAPKEGLVYDLERGEWEEMPEGMIGGWRGPAAAMDEEEMYVVDEVSGSLRRYDSETDFWEEVMASNRLKGAVQMAAGGGRVCVVCGGSRGEIVVVDVVASPPRLWVEATPPGTEVVAVHVLPRMNGAAES
BLAST of BhiUN179M10 vs. TAIR10
Match: AT1G31350.1 (KAR-UP F-box 1) HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83 Identity = 164/326 (50.31%), Postives = 216/326 (66.26%), Query Frame = 0
BLAST of BhiUN179M10 vs. TAIR10
Match: AT1G22040.1 (Galactose oxidase/kelch repeat superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07 Identity = 67/290 (23.10%), Postives = 104/290 (35.86%), Query Frame = 0
BLAST of BhiUN179M10 vs. TAIR10
Match: AT3G61350.1 (SKP1 interacting partner 4) HSP 1 Score: 52.0 bits (123), Expect = 7.8e-07 Identity = 50/196 (25.51%), Postives = 79/196 (40.31%), Query Frame = 0
BLAST of BhiUN179M10 vs. TAIR10
Match: AT1G26930.1 (Galactose oxidase/kelch repeat superfamily protein) HSP 1 Score: 46.6 bits (109), Expect = 3.3e-05 Identity = 65/264 (24.62%), Postives = 102/264 (38.64%), Query Frame = 0
BLAST of BhiUN179M10 vs. Swiss-Prot
Match: sp|Q8GX29|SKI25_ARATH (F-box/kelch-repeat protein SKIP25 OS=Arabidopsis thaliana OX=3702 GN=SKIP25 PE=1 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.2e-82 Identity = 164/326 (50.31%), Postives = 216/326 (66.26%), Query Frame = 0
BLAST of BhiUN179M10 vs. Swiss-Prot
Match: sp|Q9LM55|FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana OX=3702 GN=At1g22040 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 67/290 (23.10%), Postives = 104/290 (35.86%), Query Frame = 0
BLAST of BhiUN179M10 vs. Swiss-Prot
Match: sp|Q9M2C9|SKIP4_ARATH (F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana OX=3702 GN=SKIP4 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.4e-05 Identity = 50/196 (25.51%), Postives = 79/196 (40.31%), Query Frame = 0
BLAST of BhiUN179M10 vs. TrEMBL
Match: tr|A0A1S3BK00|A0A1S3BK00_CUCME (F-box/kelch-repeat protein SKIP25 OS=Cucumis melo OX=3656 GN=LOC103490713 PE=4 SV=1) HSP 1 Score: 588.6 bits (1516), Expect = 8.5e-165 Identity = 291/315 (92.38%), Postives = 298/315 (94.60%), Query Frame = 0
BLAST of BhiUN179M10 vs. TrEMBL
Match: tr|A0A0A0L136|A0A0A0L136_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G003480 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 6.1e-163 Identity = 287/315 (91.11%), Postives = 295/315 (93.65%), Query Frame = 0
BLAST of BhiUN179M10 vs. TrEMBL
Match: tr|A0A2C9V0W4|A0A2C9V0W4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G129100 PE=4 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 2.5e-116 Identity = 210/325 (64.62%), Postives = 254/325 (78.15%), Query Frame = 0
BLAST of BhiUN179M10 vs. TrEMBL
Match: tr|A0A2P6PB53|A0A2P6PB53_ROSCH (Putative F-box domain, kelch-type beta propeller OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0213971 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 2.9e-112 Identity = 207/321 (64.49%), Postives = 244/321 (76.01%), Query Frame = 0
BLAST of BhiUN179M10 vs. TrEMBL
Match: tr|M5WZH1|M5WZH1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G018500 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 4.9e-112 Identity = 208/321 (64.80%), Postives = 249/321 (77.57%), Query Frame = 0
BLAST of BhiUN179M10 vs. NCBI nr
Match: XP_008448576.1 (PREDICTED: F-box/kelch-repeat protein SKIP25 [Cucumis melo]) HSP 1 Score: 588.6 bits (1516), Expect = 1.3e-164 Identity = 291/315 (92.38%), Postives = 298/315 (94.60%), Query Frame = 0
BLAST of BhiUN179M10 vs. NCBI nr
Match: XP_004146198.1 (PREDICTED: F-box/kelch-repeat protein SKIP25 [Cucumis sativus] >KGN55680.1 hypothetical protein Csa_3G003480 [Cucumis sativus]) HSP 1 Score: 582.4 bits (1500), Expect = 9.2e-163 Identity = 287/315 (91.11%), Postives = 295/315 (93.65%), Query Frame = 0
BLAST of BhiUN179M10 vs. NCBI nr
Match: XP_022923249.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita moschata]) HSP 1 Score: 535.0 bits (1377), Expect = 1.7e-148 Identity = 268/310 (86.45%), Postives = 275/310 (88.71%), Query Frame = 0
BLAST of BhiUN179M10 vs. NCBI nr
Match: XP_022965312.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita maxima]) HSP 1 Score: 533.9 bits (1374), Expect = 3.7e-148 Identity = 267/310 (86.13%), Postives = 275/310 (88.71%), Query Frame = 0
BLAST of BhiUN179M10 vs. NCBI nr
Match: XP_023552710.1 (F-box/kelch-repeat protein SKIP25-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 531.9 bits (1369), Expect = 1.4e-147 Identity = 266/310 (85.81%), Postives = 274/310 (88.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
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