Cla97C10G193280.1 (mRNA) Watermelon (97103) v2

Overview
NameCla97C10G193280.1
TypemRNA
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionTrypsin inhibitor 5
LocationCla97Chr10 : 21643784 .. 21644074 (+)
Sequence length291
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCATGAAGAAGAACATTGGTTTGGCAGCGATGATGATGGTGATGATGCTTATGATTGCTACTGTGGCGGACTCAGCCTCTCCCACCGAGAAGACCGTGATCGAACTCATTACCAACCGGCGTGGCGCCAATTCTTTATTCCCAAGAAAAATGATGAAAAATGGCAGAGGAAATGGAGTTTGTCTCATACTAGGTTGGCCATGCAATCCAAGCTACGGCTGCGGCCCTTTCTCCGACAGCTGTGCTTGCTACACTGCCGGATTCTGTGGAGATTATGTAGTCTAA

mRNA sequence

ATGGAGAGCATGAAGAAGAACATTGGTTTGGCAGCGATGATGATGGTGATGATGCTTATGATTGCTACTGTGGCGGACTCAGCCTCTCCCACCGAGAAGACCGTGATCGAACTCATTACCAACCGGCGTGGCGCCAATTCTTTATTCCCAAGAAAAATGATGAAAAATGGCAGAGGAAATGGAGTTTGTCTCATACTAGGTTGGCCATGCAATCCAAGCTACGGCTGCGGCCCTTTCTCCGACAGCTGTGCTTGCTACACTGCCGGATTCTGTGGAGATTATGTAGTCTAA

Coding sequence (CDS)

ATGGAGAGCATGAAGAAGAACATTGGTTTGGCAGCGATGATGATGGTGATGATGCTTATGATTGCTACTGTGGCGGACTCAGCCTCTCCCACCGAGAAGACCGTGATCGAACTCATTACCAACCGGCGTGGCGCCAATTCTTTATTCCCAAGAAAAATGATGAAAAATGGCAGAGGAAATGGAGTTTGTCTCATACTAGGTTGGCCATGCAATCCAAGCTACGGCTGCGGCCCTTTCTCCGACAGCTGTGCTTGCTACACTGCCGGATTCTGTGGAGATTATGTAGTCTAA

Protein sequence

MESMKKNIGLAAMMMVMMLMIATVADSASPTEKTVIELITNRRGANSLFPRKMMKNGRGNGVCLILGWPCNPSYGCGPFSDSCACYTAGFCGDYVV
Homology
[Close]
BLAST of Cla97C10G193280.1 vs. NCBI nr
Match: KGN52762.1 (hypothetical protein Csa_4G000820 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-26
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 0 

Query: 1  MESMKKNIGLA-AMMMXXXXXXATVADSASPTEK-TVIELITNRRGANSLFPRKMMKNGR 60
          M+ M KNIGLA A MM      ATV +SASPTEK T+IEL+TN   A+S FPRKMM+NG+
Sbjct: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASS-FPRKMMRNGK 60

Query: 61 GNGVCLILGWPCNPSY-GCGPFSDSCACYTAGFCGDYV 96
          GNGVC I+G PCNP Y GCGPFSD+CACYTAG CGD+V
Sbjct: 61 GNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97

[Close]
BLAST of Cla97C10G193280.1 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_4G000830 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 4.8e-06
Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1  MESMKKNIGLAA--MMMXXXXXXATVADSAS-PTEKTVIELITNRRGANSLFPRK-MMKN 60
          MES KK+I   A  +++      AT+ADSA+  TE     ++ +  G +  FPRK ++KN
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVD--GGSHAFPRKNVVKN 60

Query: 61 GRGNGVCLILGWPCNPSYGCGPFSDSCACYTAGFCGDYVV 97
          G  NGVCL+ G  C     C      CACYTAG CGD+V+
Sbjct: 61 GE-NGVCLVKGKACKSHKDC---PSDCACYTAGHCGDWVL 94

[Close]
BLAST of Cla97C10G193280.1 vs. TrEMBL
Match: tr|A0A0A0KWE4|A0A0A0KWE4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-26
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 0 

Query: 1  MESMKKNIGLA-AMMMXXXXXXATVADSASPTEK-TVIELITNRRGANSLFPRKMMKNGR 60
          M+ M KNIGLA A MM      ATV +SASPTEK T+IEL+TN   A+S FPRKMM+NG+
Sbjct: 1  MKRMDKNIGLAVATMMVMMLLIATVVESASPTEKITMIELVTNHHAASS-FPRKMMRNGK 60

Query: 61 GNGVCLILGWPCNPSY-GCGPFSDSCACYTAGFCGDYV 96
          GNGVC I+G PCNP Y GCGPFSD+CACYTAG CGD+V
Sbjct: 61 GNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97

[Close]
BLAST of Cla97C10G193280.1 vs. TrEMBL
Match: tr|A0A0A0KT53|A0A0A0KT53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-06
Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 1  MESMKKNIGLAA--MMMXXXXXXATVADSAS-PTEKTVIELITNRRGANSLFPRK-MMKN 60
          MES KK+I   A  +++      AT+ADSA+  TE     ++ +  G +  FPRK ++KN
Sbjct: 1  MESKKKSIHTVATVVVVMVAFMIATLADSATIATENVAAGVLVD--GGSHAFPRKNVVKN 60

Query: 61 GRGNGVCLILGWPCNPSYGCGPFSDSCACYTAGFCGDYVV 97
          G  NGVCL+ G  C     C      CACYTAG CGD+V+
Sbjct: 61 GE-NGVCLVKGKACKSHKDC---PSDCACYTAGHCGDWVL 94

The following BLAST results are available for this feature:
BLAST of Cla97C10G193280.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52762.14.2e-2668.37hypothetical protein Csa_4G000820 [Cucumis sativus][more]
KGN52763.14.8e-0642.00hypothetical protein Csa_4G000830 [Cucumis sativus][more]
BLAST of Cla97C10G193280.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KWE4|A0A0A0KWE4_CUCSA2.8e-2668.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1[more]
tr|A0A0A0KT53|A0A0A0KT53_CUCSA3.2e-0642.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1[more]
BLAST of Cla97C10G193280.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C10G193280.1 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0010466 negative regulation of peptidase activity
cellular_component GO:0005576 extracellular region
molecular_function GO:0004866 endopeptidase inhibitor activity
molecular_function GO:0030414 peptidase inhibitor activity
molecular_function GO:0004867 serine-type endopeptidase inhibitor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cla97C10G193280Cla97C10G193280gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C10G193280.1.exon.1Cla97C10G193280.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cla97C10G193280.1.CDS.1Cla97C10G193280.1.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cla97C10G193280.1Cla97C10G193280.1-proteinpolypeptide