Cla97C05G099150 (gene) Watermelon (97103) v2

NameCla97C05G099150
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionGATA transcription factor 21-like
LocationCla97Chr05 : 28281524 .. 28281799 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCTCTCTATCCATCATCTTCCTTTGTGGAGAAACAAGAAGAAGATCCCAACCTTAAACTCTATATTTTCTCTTCAACTTCTCAAGTAGTAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAACTTGCTTTTACCACTTGCTTTAGTACTAGTAGTACCAACCAACATGATCATCAAACAGTGAATCTTCATCTTCATCATCATCTTCTTCAGCAGTCTCATCACCAACTTCAACATGATCATCAACAGGCAATTAATTACTACTCTTAA

mRNA sequence

ATGAATCCTCTCTATCCATCATCTTCCTTTGTGGAGAAACAAGAAGAAGATCCCAACCTTAAACTCTATATTTTCTCTTCAACTTCTCAAGTAGTAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAACTTGCTTTTACCACTTGCTTTAGTACTAGTAGTACCAACCAACATGATCATCAAACAGTGAATCTTCATCTTCATCATCATCTTCTTCAGCAGTCTCATCACCAACTTCAACATGATCATCAACAGGCAATTAATTACTACTCTTAA

Coding sequence (CDS)

ATGAATCCTCTCTATCCATCATCTTCCTTTGTGGAGAAACAAGAAGAAGATCCCAACCTTAAACTCTATATTTTCTCTTCAACTTCTCAAGTAGTAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCACAACTTGCTTTTACCACTTGCTTTAGTACTAGTAGTACCAACCAACATGATCATCAAACAGTGAATCTTCATCTTCATCATCATCTTCTTCAGCAGTCTCATCACCAACTTCAACATGATCATCAACAGGCAATTAATTACTACTCTTAA

Protein sequence

MNPLYPSSSFVEKQEEDPNLKLYIFSSTSQVVASSSSSSSSSQLAFTTCFSTSSTNQHDHQTVNLHLHHHLLQQSHHQLQHDHQQAINYYS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0046872 metal ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G099150.1Cla97C05G099150.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G099150Watermelon (97103) v2wmbwmbB144
Cla97C05G099150Silver-seed gourdcarwmbB0095
Cla97C05G099150Silver-seed gourdcarwmbB0189
Cla97C05G099150Silver-seed gourdcarwmbB0331
Cla97C05G099150Silver-seed gourdcarwmbB0809
Cla97C05G099150Silver-seed gourdcarwmbB0926
Cla97C05G099150Cucumber (Gy14) v2cgybwmbB056
Cla97C05G099150Cucumber (Gy14) v2cgybwmbB132
Cla97C05G099150Cucumber (Gy14) v2cgybwmbB291
Cla97C05G099150Cucumber (Gy14) v1cgywmbB675
Cla97C05G099150Cucurbita maxima (Rimu)cmawmbB028
Cla97C05G099150Cucurbita maxima (Rimu)cmawmbB074
Cla97C05G099150Cucurbita maxima (Rimu)cmawmbB481
Cla97C05G099150Cucurbita maxima (Rimu)cmawmbB821
Cla97C05G099150Cucurbita moschata (Rifu)cmowmbB016
Cla97C05G099150Cucurbita moschata (Rifu)cmowmbB063
Cla97C05G099150Cucurbita moschata (Rifu)cmowmbB113
Cla97C05G099150Cucurbita moschata (Rifu)cmowmbB456
Cla97C05G099150Cucurbita moschata (Rifu)cmowmbB794
Cla97C05G099150Wild cucumber (PI 183967)cpiwmbB060
Cla97C05G099150Wild cucumber (PI 183967)cpiwmbB141
Cla97C05G099150Wild cucumber (PI 183967)cpiwmbB317
Cla97C05G099150Cucumber (Chinese Long) v3cucwmbB057
Cla97C05G099150Cucumber (Chinese Long) v3cucwmbB141
Cla97C05G099150Cucumber (Chinese Long) v3cucwmbB315
Cla97C05G099150Cucumber (Chinese Long) v2cuwmbB058
Cla97C05G099150Cucumber (Chinese Long) v2cuwmbB139
Cla97C05G099150Cucumber (Chinese Long) v2cuwmbB307
Cla97C05G099150Bottle gourd (USVL1VR-Ls)lsiwmbB290
Cla97C05G099150Bottle gourd (USVL1VR-Ls)lsiwmbB437
Cla97C05G099150Melon (DHL92) v3.6.1medwmbB243
Cla97C05G099150Melon (DHL92) v3.6.1medwmbB281
Cla97C05G099150Melon (DHL92) v3.6.1medwmbB479
Cla97C05G099150Melon (DHL92) v3.5.1mewmbB486
Cla97C05G099150Melon (DHL92) v3.5.1mewmbB257
Cla97C05G099150Melon (DHL92) v3.5.1mewmbB296
Cla97C05G099150Watermelon (Charleston Gray)wcgwmbB190
Cla97C05G099150Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G099150Watermelon (Charleston Gray)wcgwmbB329
Cla97C05G099150Watermelon (97103) v1wmwmbB093
Cla97C05G099150Watermelon (97103) v1wmwmbB207
Cla97C05G099150Wax gourdwgowmbB303
Cla97C05G099150Wax gourdwgowmbB581