Cla97C03G060900 (gene) Watermelon (97103) v2

Overview
NameCla97C03G060900
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPentatricopeptide repeat
LocationCla97Chr03 : 15664991 .. 15667255 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTACCATTGCACATGAAGTTGTGTGCCGTCTTCTTCCGGTTTTGCTGTTTAAAGGTTTCTTCTAATTCAGCTTCTACATGTAATTTTCTTCCATTCTTTTTCTCTAGAAGATGGTTGAGTCAAAGTCAAAGAGTCCCATCTTCATTTTTGCTTCAAACCAGGCCGTTTCCGGATTATTCTCTTAAGAAGCCTTCAATTAGAGATACTGAACTTATCCATGACATCACTACTGCAATTAAGTTGCGTCGTTCTGAGCCCCTTCGTCGCATTCTAAAGCCTCATGAATCCAACTTTAGGTATGATCATCTGATTTGGGTACTGATGAATATTAAGAATGACTACAATCTGGTTTTGGCTTTCTTTGATTGGGCACGGGTTCGTAGAGATCCATCACTAGAAGCCCGTTGCATTGTTATTCACATTGCCGTGGTGTCAAATGATCTTAGACTGGCTCATGAGCTGGTTCATGATTATTTCTTGAATTTAAAACTGGAGGTTGGTGCTACAGTGACTCAATTTACCAACCGGCTGATATACACTTATAAGTACTGGGGATCAAATCCCATTGCATTTGATATATATTTTCAAGTCCTAGTTGAAATTGGTTATTTAAGTGAAGCAAGAAAACTACTGGACAAATTGTTGAGCTACGGATTAGTTGTCACTGTTGATTCTTGTAATGCTTTTCTTAGTCGCATTGCTAACCATTCTGAAGGAATAAAGATGGCAATAAAGGTTTTTTGTGAATATGGTATTAGTTGGAATACTACATCTTATAACATCATTATTTATTCTTTATGTCAATTGGGAAAAGTAAAGGAAGCCCATCGGTTACTTATGCAGATGGATTTTAGGAGTTCTACACCTGATGTTGTTAGTTATAGTACTGTGATTGATGGATATTGTCAATTGGGAGAATTGAAGAAGGCATTGAAGCTTATTGATGACATGCAAATAAAAGGACTGAAACCAAACCATTATACCTACAATAGCGTAATATTACTTTTGTGTAAAATTGGCAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAGATGATGTGTCAAAAGATTATTCCTGATAATGTTGTCTACACCACTCTCATACATGGTTTCTTCAAATTAGGACATGTTCAAACTGCAAATAAATGGTTTGACGAAATGCTGTTTAAGAAGATCAGTCCTGATTATATAACCTATACAACTCTTATCCAGGGATTTGGTCAAAGTGGAAAGGTGATAGAACCACAAAATCTTTTCCATGAAATGATTAGCAGAGGCTTAAAGCCTGATGAAGTCACATATACAACGCTGATTGATGTTTACTGCAAAGCAGGTGAGATGATGAATGCATTTTCTCTTCACAATGAGATGGTTCAAATGGGAACGACTCCAAACATTGTTACTTACGGTGCCCTGATTGATGGCCTCTGTAAGCGAGGAGAACTAAATACAGCAAATGAGCTTTTGGATGAGATGCGCAAAAAGGGCCTTCAACTGAATGTGTGCACTTATAACTCAATGATCAATGGTAATTGCAAAGCTGGAAATATTGCACAAGCAATAAGATTGATGAAAGAGATGGAGGTGGCTGGGATTGATCCTGATACTATCACTTATACCACGGTCATTGATGCTTATTGTAGATTAGGAGATATTGGTATGGGTCATAAACTTCTTCAGGAGATGTTAGATAGAGGGCTTCAACCAACAGTTGTTACATTTAATGTTCTAATGAATGGATTTTGTACGTTGGGAATGCTTGAAGATGGTGATAAGCTCTTGGGATGGATGCTAGAGAAGGGCATTGTGCCTAATGCAATAACATACAATACTCTCATGAAGCAGTATTGCATTAGAAATAATATGAAAACTACAACCCAGATTTACAAGAGGATGCGTAATCAAGGAGTGATGCCGGATAGTAACACCTACAATATTTTAATAAAAGGGCATTGTAAGGCACGGAATCTGAAAGAGGCATGGTTTTTACATAAAGAGATGGTTGAAAAAGGATATATTCCCACTGTTACTTCATATAATGCACTTATAAAAGGGTTTTATAAGAAAAAGAAAATTTTGGAAGCAAGGGAACTCTTTGAAGAGATGAGAGGACATGGGTTGGTTGCTGATGGAGAAATATTCAATATCTTTGTTGATCTGTACTATGAAGAAGGAAATATAGAGATAACTCTTAATCTCTGTGATGAAGCGATCGAGAAATGTCTTCTTAATGAGATAAAAATGAAACAGCCGGAGTAG

mRNA sequence

ATGATTTTACCATTGCACATGAAGTTGTGTGCCGTCTTCTTCCGGTTTTGCTGTTTAAAGGTTTCTTCTAATTCAGCTTCTACATGTAATTTTCTTCCATTCTTTTTCTCTAGAAGATGGTTGAGTCAAAGTCAAAGAGTCCCATCTTCATTTTTGCTTCAAACCAGGCCGTTTCCGGATTATTCTCTTAAGAAGCCTTCAATTAGAGATACTGAACTTATCCATGACATCACTACTGCAATTAAGTTGCGTCGTTCTGAGCCCCTTCGTCGCATTCTAAAGCCTCATGAATCCAACTTTAGGTATGATCATCTGATTTGGGTACTGATGAATATTAAGAATGACTACAATCTGGTTTTGGCTTTCTTTGATTGGGCACGGGTTCGTAGAGATCCATCACTAGAAGCCCGTTGCATTGTTATTCACATTGCCGTGGTGTCAAATGATCTTAGACTGGCTCATGAGCTGGTTCATGATTATTTCTTGAATTTAAAACTGGAGGTTGGTGCTACAGTGACTCAATTTACCAACCGGCTGATATACACTTATAAGTACTGGGGATCAAATCCCATTGCATTTGATATATATTTTCAAGTCCTAGTTGAAATTGGTTATTTAAGTGAAGCAAGAAAACTACTGGACAAATTGTTGAGCTACGGATTAGTTGTCACTGTTGATTCTTGTAATGCTTTTCTTAGTCGCATTGCTAACCATTCTGAAGGAATAAAGATGGCAATAAAGGTTTTTTGTGAATATGGTATTAGTTGGAATACTACATCTTATAACATCATTATTTATTCTTTATGTCAATTGGGAAAAGTAAAGGAAGCCCATCGGTTACTTATGCAGATGGATTTTAGGAGTTCTACACCTGATGTTGTTAGTTATAGTACTGTGATTGATGGATATTGTCAATTGGGAGAATTGAAGAAGGCATTGAAGCTTATTGATGACATGCAAATAAAAGGACTGAAACCAAACCATTATACCTACAATAGCGTAATATTACTTTTGTGTAAAATTGGCAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAGATGATGTGTCAAAAGATTATTCCTGATAATGTTGTCTACACCACTCTCATACATGGTTTCTTCAAATTAGGACATGTTCAAACTGCAAATAAATGGTTTGACGAAATGCTGTTTAAGAAGATCAGTCCTGATTATATAACCTATACAACTCTTATCCAGGGATTTGGTCAAAGTGGAAAGGTGATAGAACCACAAAATCTTTTCCATGAAATGATTAGCAGAGGCTTAAAGCCTGATGAAGTCACATATACAACGCTGATTGATGTTTACTGCAAAGCAGGTGAGATGATGAATGCATTTTCTCTTCACAATGAGATGGTTCAAATGGGAACGACTCCAAACATTGTTACTTACGGTGCCCTGATTGATGGCCTCTGTAAGCGAGGAGAACTAAATACAGCAAATGAGCTTTTGGATGAGATGCGCAAAAAGGGCCTTCAACTGAATGTGTGCACTTATAACTCAATGATCAATGGTAATTGCAAAGCTGGAAATATTGCACAAGCAATAAGATTGATGAAAGAGATGGAGGTGGCTGGGATTGATCCTGATACTATCACTTATACCACGGTCATTGATGCTTATTGTAGATTAGGAGATATTGGTATGGGTCATAAACTTCTTCAGGAGATGTTAGATAGAGGGCTTCAACCAACAGTTGTTACATTTAATGTTCTAATGAATGGATTTTGTACGTTGGGAATGCTTGAAGATGGTGATAAGCTCTTGGGATGGATGCTAGAGAAGGGCATTGTGCCTAATGCAATAACATACAATACTCTCATGAAGCAGTATTGCATTAGAAATAATATGAAAACTACAACCCAGATTTACAAGAGGATGCGTAATCAAGGAGTGATGCCGGATAGTAACACCTACAATATTTTAATAAAAGGGCATTGTAAGGCACGGAATCTGAAAGAGGCATGGTTTTTACATAAAGAGATGGTTGAAAAAGGATATATTCCCACTGTTACTTCATATAATGCACTTATAAAAGGGTTTTATAAGAAAAAGAAAATTTTGGAAGCAAGGGAACTCTTTGAAGAGATGAGAGGACATGGGTTGGTTGCTGATGGAGAAATATTCAATATCTTTGTTGATCTGTACTATGAAGAAGGAAATATAGAGATAACTCTTAATCTCTGTGATGAAGCGATCGAGAAATGTCTTCTTAATGAGATAAAAATGAAACAGCCGGAGTAG

Coding sequence (CDS)

ATGATTTTACCATTGCACATGAAGTTGTGTGCCGTCTTCTTCCGGTTTTGCTGTTTAAAGGTTTCTTCTAATTCAGCTTCTACATGTAATTTTCTTCCATTCTTTTTCTCTAGAAGATGGTTGAGTCAAAGTCAAAGAGTCCCATCTTCATTTTTGCTTCAAACCAGGCCGTTTCCGGATTATTCTCTTAAGAAGCCTTCAATTAGAGATACTGAACTTATCCATGACATCACTACTGCAATTAAGTTGCGTCGTTCTGAGCCCCTTCGTCGCATTCTAAAGCCTCATGAATCCAACTTTAGGTATGATCATCTGATTTGGGTACTGATGAATATTAAGAATGACTACAATCTGGTTTTGGCTTTCTTTGATTGGGCACGGGTTCGTAGAGATCCATCACTAGAAGCCCGTTGCATTGTTATTCACATTGCCGTGGTGTCAAATGATCTTAGACTGGCTCATGAGCTGGTTCATGATTATTTCTTGAATTTAAAACTGGAGGTTGGTGCTACAGTGACTCAATTTACCAACCGGCTGATATACACTTATAAGTACTGGGGATCAAATCCCATTGCATTTGATATATATTTTCAAGTCCTAGTTGAAATTGGTTATTTAAGTGAAGCAAGAAAACTACTGGACAAATTGTTGAGCTACGGATTAGTTGTCACTGTTGATTCTTGTAATGCTTTTCTTAGTCGCATTGCTAACCATTCTGAAGGAATAAAGATGGCAATAAAGGTTTTTTGTGAATATGGTATTAGTTGGAATACTACATCTTATAACATCATTATTTATTCTTTATGTCAATTGGGAAAAGTAAAGGAAGCCCATCGGTTACTTATGCAGATGGATTTTAGGAGTTCTACACCTGATGTTGTTAGTTATAGTACTGTGATTGATGGATATTGTCAATTGGGAGAATTGAAGAAGGCATTGAAGCTTATTGATGACATGCAAATAAAAGGACTGAAACCAAACCATTATACCTACAATAGCGTAATATTACTTTTGTGTAAAATTGGCAAGCCATTTGAAGCAGAAAAAGTATTGAGAGAGATGATGTGTCAAAAGATTATTCCTGATAATGTTGTCTACACCACTCTCATACATGGTTTCTTCAAATTAGGACATGTTCAAACTGCAAATAAATGGTTTGACGAAATGCTGTTTAAGAAGATCAGTCCTGATTATATAACCTATACAACTCTTATCCAGGGATTTGGTCAAAGTGGAAAGGTGATAGAACCACAAAATCTTTTCCATGAAATGATTAGCAGAGGCTTAAAGCCTGATGAAGTCACATATACAACGCTGATTGATGTTTACTGCAAAGCAGGTGAGATGATGAATGCATTTTCTCTTCACAATGAGATGGTTCAAATGGGAACGACTCCAAACATTGTTACTTACGGTGCCCTGATTGATGGCCTCTGTAAGCGAGGAGAACTAAATACAGCAAATGAGCTTTTGGATGAGATGCGCAAAAAGGGCCTTCAACTGAATGTGTGCACTTATAACTCAATGATCAATGGTAATTGCAAAGCTGGAAATATTGCACAAGCAATAAGATTGATGAAAGAGATGGAGGTGGCTGGGATTGATCCTGATACTATCACTTATACCACGGTCATTGATGCTTATTGTAGATTAGGAGATATTGGTATGGGTCATAAACTTCTTCAGGAGATGTTAGATAGAGGGCTTCAACCAACAGTTGTTACATTTAATGTTCTAATGAATGGATTTTGTACGTTGGGAATGCTTGAAGATGGTGATAAGCTCTTGGGATGGATGCTAGAGAAGGGCATTGTGCCTAATGCAATAACATACAATACTCTCATGAAGCAGTATTGCATTAGAAATAATATGAAAACTACAACCCAGATTTACAAGAGGATGCGTAATCAAGGAGTGATGCCGGATAGTAACACCTACAATATTTTAATAAAAGGGCATTGTAAGGCACGGAATCTGAAAGAGGCATGGTTTTTACATAAAGAGATGGTTGAAAAAGGATATATTCCCACTGTTACTTCATATAATGCACTTATAAAAGGGTTTTATAAGAAAAAGAAAATTTTGGAAGCAAGGGAACTCTTTGAAGAGATGAGAGGACATGGGTTGGTTGCTGATGGAGAAATATTCAATATCTTTGTTGATCTGTACTATGAAGAAGGAAATATAGAGATAACTCTTAATCTCTGTGATGAAGCGATCGAGAAATGTCTTCTTAATGAGATAAAAATGAAACAGCCGGAGTAG

Protein sequence

MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPDYSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVLAFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSEGIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCQLGELKKALKLIDDMQIKGLKPNHYTYNSVILLLCKIGKPFEAEKVLREMMCQKIIPDNVVYTTLIHGFFKLGHVQTANKWFDEMLFKKISPDYITYTTLIQGFGQSGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMMNAFSLHNEMVQMGTTPNIVTYGALIDGLCKRGELNTANELLDEMRKKGLQLNVCTYNSMINGNCKAGNIAQAIRLMKEMEVAGIDPDTITYTTVIDAYCRLGDIGMGHKLLQEMLDRGLQPTVVTFNVLMNGFCTLGMLEDGDKLLGWMLEKGIVPNAITYNTLMKQYCIRNNMKTTTQIYKRMRNQGVMPDSNTYNILIKGHCKARNLKEAWFLHKEMVEKGYIPTVTSYNALIKGFYKKKKILEARELFEEMRGHGLVADGEIFNIFVDLYYEEGNIEITLNLCDEAIEKCLLNEIKMKQPE
Homology
[Close]
BLAST of Cla97C03G060900 vs. NCBI nr
Match: XP_011660255.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucumis sativus] >KGN66735.1 hypothetical protein Csa_1G666450 [Cucumis sativus])

HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150
Identity = 265/292 (90.75%), Postives = 278/292 (95.21%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           MILPLH KLC VFFRF CL+VSSNSAS CNFLPFF SRRWL+QSQRVPSSFLLQTRPFPD
Sbjct: 1   MILPLHKKLCVVFFRFSCLQVSSNSASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPD 60

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRDTELIHDIT  IKLRRSEPL RILK HESNFRYDHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDWARVRR+PSLEARCI+IHIAVVSNDLRLAHELVHDYFLN KLE+G  +TQFT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLI 180

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWG NPIAFDI+FQVLVEIG+LSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN+SE
Sbjct: 181 YTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
           GI+MAIKVFCEYGISWNTTSYNIIIYSLC+LGKVKEAHRLLMQMDFRSSTPD
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD 292

[Close]
BLAST of Cla97C03G060900 vs. NCBI nr
Match: XP_008443757.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucumis melo] >XP_008443758.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150
Identity = 264/292 (90.41%), Postives = 278/292 (95.21%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           MILPLH KLC VFFRFCCL+VSSNSAS CNFLPF FSRRWL+QSQRVPS FLLQTRPFPD
Sbjct: 1   MILPLHKKLCVVFFRFCCLQVSSNSASRCNFLPFSFSRRWLTQSQRVPSPFLLQTRPFPD 60

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRDTELIHDIT  IKL RSEPL RILKPHESNFRYDHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLHRSEPLHRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDWARVRR+PSLEARCI++HIAVVSNDLRLA ELVHDYFLN KLE+G T+T+FT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIVHIAVVSNDLRLARELVHDYFLNSKLEIGVTMTKFTHRLI 180

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWGSNPIAFDI FQVLVEIG+LSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN+SE
Sbjct: 181 YTYKYWGSNPIAFDILFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
           GI+MAIKVFCEYGISWNTTSYNIIIYSLC+LGKVKEAHRLLMQMDFRSSTPD
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD 292

[Close]
BLAST of Cla97C03G060900 vs. NCBI nr
Match: XP_022922762.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922769.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata] >XP_022922778.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita moschata])

HSP 1 Score: 486.1 bits (1250), Expect = 2.1e-133
Identity = 239/292 (81.85%), Postives = 261/292 (89.38%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           M+ PL  K CAV  RF CL+VSSNSASTCNFLPF FSRRWLSQSQRVPSSFLLQTRPFPD
Sbjct: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRD EL+H+IT  IKLRRSEPLRR LKP+ES+FR+DHLIWVLMNIKN+YNLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLKPYESSFRHDHLIWVLMNIKNEYNLVL 145

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDW+R+RRDPSLEARCIVIHIAV SNDLR+AHELV D+FLN  L V  T+ QFTNRLI
Sbjct: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTNRLI 205

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWGSNPIAFDI+FQVLVE G  SEAR LLDK LSYGLVVTVDSCN FLSR+AN+SE
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
            I MAIK F EYGISWNTTSYNI+IY+LC+LGK+KEAHRLLMQMD+RSSTPD
Sbjct: 266 EIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPD 317

[Close]
BLAST of Cla97C03G060900 vs. NCBI nr
Match: XP_022989951.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima] >XP_022989952.1 pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita maxima])

HSP 1 Score: 484.2 bits (1245), Expect = 8.1e-133
Identity = 237/292 (81.16%), Postives = 260/292 (89.04%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           M+ PLH K CAV  R  CL+VSSNSASTCNFLPF FS RWLSQSQRVPSSFLLQTRPFPD
Sbjct: 26  MVPPLHTKWCAVSSRLRCLQVSSNSASTCNFLPFLFSIRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRD EL+H+IT  IKLRRSEPLRR L P+ES+FR+DHLIWVLMNIKNDYNLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRSEPLRRTLNPYESSFRHDHLIWVLMNIKNDYNLVL 145

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDWAR+RRDPSLEARCIVIHIAV SNDLR+AHELV D+FLN  L V  T+ QFT+RLI
Sbjct: 146 AFFDWARIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTDRLI 205

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWGSNPIAFDI+FQVLVE G  SEARKLLD+ LSYGLVVTVDSCN FLSR+AN+SE
Sbjct: 206 YTYKYWGSNPIAFDIFFQVLVEFGSFSEARKLLDRWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
            + MAIK F EYGISWNTTSYNI+IY+LC+LGK+KEAHRLLMQMD+RSSTPD
Sbjct: 266 EVGMAIKFFREYGISWNTTSYNIVIYALCKLGKIKEAHRLLMQMDYRSSTPD 317

[Close]
BLAST of Cla97C03G060900 vs. NCBI nr
Match: XP_023544192.1 (pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 480.3 bits (1235), Expect = 1.2e-131
Identity = 236/292 (80.82%), Postives = 258/292 (88.36%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           M+ PL  K CAV  RF CL+VSSNSASTCNFLPF FSRRWLSQSQRVPSSFLLQTRPFPD
Sbjct: 26  MVPPLRTKWCAVSSRFRCLQVSSNSASTCNFLPFLFSRRWLSQSQRVPSSFLLQTRPFPD 85

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRD EL+H+IT  IKLRR EPLRR LKP+ES+FR+DHLIWVLMNIKNDYNLVL
Sbjct: 86  YSPKKPTIRDAELVHNITATIKLRRYEPLRRTLKPYESSFRHDHLIWVLMNIKNDYNLVL 145

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDW+R+RRDPSLEARCIVIHIAV SNDLR+AHELV D+FLN  L V  T+ QFTNRL+
Sbjct: 146 AFFDWSRIRRDPSLEARCIVIHIAVASNDLRMAHELVRDHFLNSNLGVSVTMAQFTNRLM 205

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWG NPIAFDI+FQ LVE G  SEAR LLDK LSYGLVVTVDSCN FLSR+AN+SE
Sbjct: 206 YTYKYWGLNPIAFDIFFQALVEFGSFSEARILLDKWLSYGLVVTVDSCNFFLSRMANNSE 265

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
            I MAIK F EYGISWNTTSYNI+IY+LC+LGK+KEAHRLLMQMD+RSSTPD
Sbjct: 266 EIGMAIKFFREYGISWNTTSYNIVIYALCRLGKIKEAHRLLMQMDYRSSTPD 317

[Close]
BLAST of Cla97C03G060900 vs. TrEMBL
Match: tr|A0A1S3B9I7|A0A1S3B9I7_CUCME (pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487274 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 2.2e-150
Identity = 264/292 (90.41%), Postives = 278/292 (95.21%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           MILPLH KLC VFFRFCCL+VSSNSAS CNFLPF FSRRWL+QSQRVPS FLLQTRPFPD
Sbjct: 1   MILPLHKKLCVVFFRFCCLQVSSNSASRCNFLPFSFSRRWLTQSQRVPSPFLLQTRPFPD 60

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRDTELIHDIT  IKL RSEPL RILKPHESNFRYDHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLHRSEPLHRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDWARVRR+PSLEARCI++HIAVVSNDLRLA ELVHDYFLN KLE+G T+T+FT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIVHIAVVSNDLRLARELVHDYFLNSKLEIGVTMTKFTHRLI 180

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWGSNPIAFDI FQVLVEIG+LSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN+SE
Sbjct: 181 YTYKYWGSNPIAFDILFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
           GI+MAIKVFCEYGISWNTTSYNIIIYSLC+LGKVKEAHRLLMQMDFRSSTPD
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD 292

[Close]
BLAST of Cla97C03G060900 vs. TrEMBL
Match: tr|A0A0A0LXZ2|A0A0A0LXZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 2.2e-150
Identity = 265/292 (90.75%), Postives = 278/292 (95.21%), Query Frame = 0 

Query: 1   MILPLHMKLCAVFFRFCCLKVSSNSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPD 60
           MILPLH KLC VFFRF CL+VSSNSAS CNFLPFF SRRWL+QSQRVPSSFLLQTRPFPD
Sbjct: 1   MILPLHKKLCVVFFRFSCLQVSSNSASRCNFLPFFLSRRWLTQSQRVPSSFLLQTRPFPD 60

Query: 61  YSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVL 120
           YS KKP+IRDTELIHDIT  IKLRRSEPL RILK HESNFRYDHLIWVLMNIKNDYNLVL
Sbjct: 61  YSPKKPTIRDTELIHDITAVIKLRRSEPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVL 120

Query: 121 AFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLI 180
           AFFDWARVRR+PSLEARCI+IHIAVVSNDLRLAHELVHDYFLN KLE+G  +TQFT+RLI
Sbjct: 121 AFFDWARVRREPSLEARCIIIHIAVVSNDLRLAHELVHDYFLNSKLEIGVKMTQFTHRLI 180

Query: 181 YTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSE 240
           YTYKYWG NPIAFDI+FQVLVEIG+LSEARKLLDKLLSYGLVVTVDSCNAFLSRIAN+SE
Sbjct: 181 YTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSE 240

Query: 241 GIKMAIKVFCEYGISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
           GI+MAIKVFCEYGISWNTTSYNIIIYSLC+LGKVKEAHRLLMQMDFRSSTPD
Sbjct: 241 GIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPD 292

[Close]
BLAST of Cla97C03G060900 vs. TrEMBL
Match: tr|A0A2N9EBU2|A0A2N9EBU2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS65 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 177/292 (60.62%), Postives = 222/292 (76.03%), Query Frame = 0 

Query: 7   MKLCAVFFRFCCLKVSSNSAS---TCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPDYSL 66
           M  C++FF   C ++ S+ +      N+LP F  RRWLSQ+     S     RPFPDYS 
Sbjct: 1   MNRCSIFFTDHCFRLISHQSHLGFASNYLPLFCLRRWLSQAHSTSGS--TDARPFPDYSP 60

Query: 67  KKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVLAFF 126
           KKP+IRD+E +H I+T IKLRRSEPLRRILK +ES FR DHLIWVLMNIKNDY LVL FF
Sbjct: 61  KKPTIRDSEFVHQISTTIKLRRSEPLRRILKSYESKFRPDHLIWVLMNIKNDYKLVLDFF 120

Query: 127 DWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLIYTY 186
           DW  +RRDP+LEARCIV+ IAV S DL+LAHEL+H+++    L++G + T F +RLIYTY
Sbjct: 121 DWVCLRRDPTLEARCIVVQIAVASKDLKLAHELIHEFWAKPNLDIGLSYTHFVDRLIYTY 180

Query: 187 KYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSEGIK 246
           K WGS+P  FDI+FQVLVE G  +EARKL DK+L+YGL+++VDSCN FL+R++N+ + I+
Sbjct: 181 KDWGSDPYVFDIFFQVLVEAGMFNEARKLFDKMLNYGLIISVDSCNLFLTRLSNNFDRIE 240

Query: 247 MAIKVFCEY---GISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
           MAIKVF EY   G+ WNT S+NIII+SLCQLGK+KEAH LL+QM+ R   PD
Sbjct: 241 MAIKVFNEYPEVGVCWNTASFNIIIHSLCQLGKIKEAHNLLVQMELRGCMPD 290

[Close]
BLAST of Cla97C03G060900 vs. TrEMBL
Match: tr|A0A2P5FQK2|A0A2P5FQK2_9ROSA (Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_041840 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 3.0e-91
Identity = 178/289 (61.59%), Postives = 218/289 (75.43%), Query Frame = 0 

Query: 12  VFFRFCCLKVSS-----NSASTCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPDYSLKKP 71
           + F   CL+++S     N  S   F P FF RR LSQ  +  S+    TRPFPDYS KKP
Sbjct: 5   IIFSVHCLRITSLHPCLNYGS--EFSPLFFLRRNLSQVLQASSA---NTRPFPDYSPKKP 64

Query: 72  SIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVLAFFDWA 131
           +I+D EL+H ITT IKLRRSEPLRR+LKP+ES FR DHLIW+LMNIKNDY LVL  FDWA
Sbjct: 65  TIKDAELVHHITTTIKLRRSEPLRRVLKPYESKFRSDHLIWILMNIKNDYKLVLDIFDWA 124

Query: 132 RVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLIYTYKYW 191
            VRR P+LEARCIV+ IA  S DL++AH L+ D++    L++  + T F+ RLIYTYK W
Sbjct: 125 CVRRSPTLEARCIVVQIATASKDLKMAHGLILDFWGKPNLDISLSFTHFSERLIYTYKDW 184

Query: 192 GSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSEGIKMAI 251
           GS+P  FDI+FQVLVE G LSEARKL +KLLSYGLV++V SCN FL+R++++ +GI++AI
Sbjct: 185 GSDPHVFDIFFQVLVEAGMLSEARKLFNKLLSYGLVISVGSCNLFLTRLSSNLDGIEIAI 244

Query: 252 KVFCEY---GISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFRSSTPD 293
           KVF EY   GI W+T SYNIII SLCQLGK+KEAHRLL+QM+ RS  PD
Sbjct: 245 KVFNEYPEVGICWSTASYNIIINSLCQLGKIKEAHRLLLQMELRSCLPD 288

[Close]
BLAST of Cla97C03G060900 vs. TrEMBL
Match: tr|A0A2P4KBV9|A0A2P4KBV9_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_41609 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 8.7e-91
Identity = 169/287 (58.89%), Postives = 215/287 (74.91%), Query Frame = 0 

Query: 7   MKLCAVFFRFCCLKVSSNSAS---TCNFLPFFFSRRWLSQSQRVPSSFLLQTRPFPDYSL 66
           M  C++FF   C ++ S+ +      N+LP F  RR+LSQ   +  S     RPFPDYS 
Sbjct: 1   MNRCSIFFSDHCFRLFSHRSHLGFASNYLPLFCLRRFLSQGHSISGS--TDARPFPDYSP 60

Query: 67  KKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRYDHLIWVLMNIKNDYNLVLAFF 126
           KKP+IRD+E +H I+T IKLRRSEPLRRILKP+ES FR DHLIWVLMNIKNDY LVL FF
Sbjct: 61  KKPTIRDSEFVHQISTVIKLRRSEPLRRILKPYESKFRPDHLIWVLMNIKNDYKLVLDFF 120

Query: 127 DWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFLNLKLEVGATVTQFTNRLIYTY 186
           DW  +RRDP+LEARCI + IAV S DL+LAHEL+ +++    L++G + + F +RLIYTY
Sbjct: 121 DWVCLRRDPTLEARCIFVQIAVASKDLKLAHELIREFWAKPNLDIGLSYSNFVDRLIYTY 180

Query: 187 KYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANHSEGIK 246
           K WGS P  FDI+FQVLVE G  +EARK  DKL +YGL+++V SCN  L+ ++N+S+GI+
Sbjct: 181 KDWGSEPYVFDIFFQVLVEAGLFNEARKFFDKLSNYGLIISVKSCNLLLTCLSNNSDGIE 240

Query: 247 MAIKVFCEY---GISWNTTSYNIIIYSLCQLGKVKEAHRLLMQMDFR 288
           +AIKVF +Y   G+ WNT SYNIII+SLCQLGK+KEAH LL+QM+ R
Sbjct: 241 VAIKVFNDYPESGVCWNTASYNIIIHSLCQLGKIKEAHNLLVQMELR 285

[Close]
BLAST of Cla97C03G060900 vs. Swiss-Prot
Match: sp|Q0WVK7|PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.2e-76
Identity = 139/251 (55.38%), Postives = 182/251 (72.51%), Query Frame = 0 

Query: 43  QSQRVPSSFLLQTRPFPDYSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRY 102
           QS+ +  S L  TRPFPDYS KK S+RDTE +H IT  IKLRR+EPLRR LKP+E  F+ 
Sbjct: 28  QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87

Query: 103 DHLIWVLMNIKNDYNLVLAFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFL 162
           DHLIWVLM IK DY LVL FFDWAR RRD +LE+ CIVIH+AV S DL++A  L+  ++ 
Sbjct: 88  DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147

Query: 163 NLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLV 222
             KL V  +  QF + L+YTYK WGS+P  FD++FQVLV+ G L EAR++ +K+L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207

Query: 223 VTVDSCNAFLSRIANHSEGIKMAIKVFCEY---GISWNTTSYNIIIYSLCQLGKVKEAHR 282
           ++VDSCN +L+R++        AI VF E+   G+ WN  SYNI+I+ +CQLG++KEAH 
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267

Query: 283 LLMQMDFRSST 291
           LL+ M+ +  T
Sbjct: 268 LLLLMELKGYT 278

[Close]
BLAST of Cla97C03G060900 vs. Swiss-Prot
Match: sp|Q9SZ10|PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.2e-12
Identity = 52/196 (26.53%), Postives = 93/196 (47.45%), Query Frame = 0 

Query: 42  SQSQRVPSSFLLQTRPFPDYSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFR 101
           S++ R+  +      P P     +P  +D + ++   + +     + L + L  H  +FR
Sbjct: 25  SENPRLFKTLGAANTPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNK-LSDHLDSFR 84

Query: 102 YDHLIWVLMNIKNDYNLVLAFFDWARVRR--DPSLEARCIVIHIAVVSNDLRLAHELVHD 161
             +   VL+ I+ DY L L FF+WA+ R     SLE   IV+H    +   + A  ++ D
Sbjct: 85  VKN---VLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRD 144

Query: 162 YFLNLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSY 221
             +N  +++ A V    + L+Y+Y+   S P  FD  F+    +     A     ++  Y
Sbjct: 145 VLVNGGVDLPAKV---FDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDY 204

Query: 222 GLVVTVDSCNAFLSRI 236
           G + TV+SCNA++S +
Sbjct: 205 GFLPTVESCNAYMSSL 213

[Close]
BLAST of Cla97C03G060900 vs. Swiss-Prot
Match: sp|P0C894|PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.2e-04
Identity = 38/136 (27.94%), Postives = 61/136 (44.85%), Query Frame = 0 

Query: 106 IW---VLMNIKNDYNLVLAFFDWARVRR--DPSLEARCIVIHIAVVSNDLRLAHELVHDY 165
           IW   VL+ +K D  L   FF W+  R     S+E+ CIV HI   +     A+ ++ + 
Sbjct: 109 IWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEM 168

Query: 166 FLNLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYG 225
            L+ K +       ++ R +    +       FD  F VL+++G L EA +   K+  + 
Sbjct: 169 VLS-KADCDVFDVLWSTRNVCVPGFG-----VFDALFSVLIDLGMLEEAIQCFSKMKRFR 228

Query: 226 LVVTVDSCNAFLSRIA 237
           +     SCN  L R A
Sbjct: 229 VFPKTRSCNGLLHRFA 238

[Close]
BLAST of Cla97C03G060900 vs. TAIR10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 286.6 bits (732), Expect = 4.5e-77
Identity = 139/251 (55.38%), Postives = 182/251 (72.51%), Query Frame = 0 

Query: 43  QSQRVPSSFLLQTRPFPDYSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFRY 102
           QS+ +  S L  TRPFPDYS KK S+RDTE +H IT  IKLRR+EPLRR LKP+E  F+ 
Sbjct: 28  QSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPLRRSLKPYECKFKT 87

Query: 103 DHLIWVLMNIKNDYNLVLAFFDWARVRRDPSLEARCIVIHIAVVSNDLRLAHELVHDYFL 162
           DHLIWVLM IK DY LVL FFDWAR RRD +LE+ CIVIH+AV S DL++A  L+  ++ 
Sbjct: 88  DHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWE 147

Query: 163 NLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYGLV 222
             KL V  +  QF + L+YTYK WGS+P  FD++FQVLV+ G L EAR++ +K+L+YGLV
Sbjct: 148 RPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207

Query: 223 VTVDSCNAFLSRIANHSEGIKMAIKVFCEY---GISWNTTSYNIIIYSLCQLGKVKEAHR 282
           ++VDSCN +L+R++        AI VF E+   G+ WN  SYNI+I+ +CQLG++KEAH 
Sbjct: 208 LSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHH 267

Query: 283 LLMQMDFRSST 291
           LL+ M+ +  T
Sbjct: 268 LLLLMELKGYT 278

[Close]
BLAST of Cla97C03G060900 vs. TAIR10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-13
Identity = 52/196 (26.53%), Postives = 93/196 (47.45%), Query Frame = 0 

Query: 42  SQSQRVPSSFLLQTRPFPDYSLKKPSIRDTELIHDITTAIKLRRSEPLRRILKPHESNFR 101
           S++ R+  +      P P     +P  +D + ++   + +     + L + L  H  +FR
Sbjct: 25  SENPRLFKTLGAANTPIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNK-LSDHLDSFR 84

Query: 102 YDHLIWVLMNIKNDYNLVLAFFDWARVRR--DPSLEARCIVIHIAVVSNDLRLAHELVHD 161
             +   VL+ I+ DY L L FF+WA+ R     SLE   IV+H    +   + A  ++ D
Sbjct: 85  VKN---VLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRD 144

Query: 162 YFLNLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSY 221
             +N  +++ A V    + L+Y+Y+   S P  FD  F+    +     A     ++  Y
Sbjct: 145 VLVNGGVDLPAKV---FDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDY 204

Query: 222 GLVVTVDSCNAFLSRI 236
           G + TV+SCNA++S +
Sbjct: 205 GFLPTVESCNAYMSSL 213

[Close]
BLAST of Cla97C03G060900 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.2e-05
Identity = 38/136 (27.94%), Postives = 61/136 (44.85%), Query Frame = 0 

Query: 106 IW---VLMNIKNDYNLVLAFFDWARVRR--DPSLEARCIVIHIAVVSNDLRLAHELVHDY 165
           IW   VL+ +K D  L   FF W+  R     S+E+ CIV HI   +     A+ ++ + 
Sbjct: 109 IWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEM 168

Query: 166 FLNLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYG 225
            L+ K +       ++ R +    +       FD  F VL+++G L EA +   K+  + 
Sbjct: 169 VLS-KADCDVFDVLWSTRNVCVPGFG-----VFDALFSVLIDLGMLEEAIQCFSKMKRFR 228

Query: 226 LVVTVDSCNAFLSRIA 237
           +     SCN  L R A
Sbjct: 229 VFPKTRSCNGLLHRFA 238

[Close]
BLAST of Cla97C03G060900 vs. TAIR10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 3.0e-04
Identity = 38/135 (28.15%), Postives = 57/135 (42.22%), Query Frame = 0 

Query: 105 LIWVLMNIKNDYNLVLAFFDWARVR----RDPSLEARCIVIHIAVVSNDLRLAHELVHDY 164
           ++ VL   +ND  L   F D         +  SL     +IHI V S  L  A   +   
Sbjct: 81  VVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSA-MIHILVRSGRLSDAQSCL--- 140

Query: 165 FLNLKLEVGATVTQFTNRLIYTYKYWGSNPIAFDIYFQVLVEIGYLSEARKLLDKLLSYG 224
            L +    G +  +  N L  T+   GSN   FD+  +  V+   L EA +    L S G
Sbjct: 141 -LRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 200

Query: 225 LVVTVDSCNAFLSRI 236
             V++D+CNA +  +
Sbjct: 201 FTVSIDACNALIGSL 210

The following BLAST results are available for this feature:
BLAST of Cla97C03G060900 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011660255.13.3e-15090.75PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial ... [more]
XP_008443757.13.3e-15090.41PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial ... [more]
XP_022922762.12.1e-13381.85pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... [more]
XP_022989951.18.1e-13381.16pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... [more]
XP_023544192.11.2e-13180.82pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Cucurbita ... [more]
BLAST of Cla97C03G060900 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B9I7|A0A1S3B9I7_CUCME2.2e-15090.41pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Cucumis ... [more]
tr|A0A0A0LXZ2|A0A0A0LXZ2_CUCSA2.2e-15090.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G666450 PE=4 SV=1[more]
tr|A0A2N9EBU2|A0A2N9EBU2_FAGSY1.4e-9660.62Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS65 PE=4 SV=1[more]
tr|A0A2P5FQK2|A0A2P5FQK2_9ROSA3.0e-9161.59Tetratricopeptide-like helical domain containing protein OS=Trema orientalis OX=... [more]
tr|A0A2P4KBV9|A0A2P4KBV9_QUESU8.7e-9158.89Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5... [more]
BLAST of Cla97C03G060900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0WVK7|PPR12_ARATH8.2e-7655.38Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
sp|Q9SZ10|PP338_ARATH2.2e-1226.53Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
sp|P0C894|PP143_ARATH2.2e-0427.94Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... [more]
BLAST of Cla97C03G060900 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05670.14.5e-7755.38Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT4G26680.11.2e-1326.53Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02150.11.2e-0527.94Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G01110.13.0e-0428.15Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G060900.1Cla97C03G060900.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 571..619
e-value: 1.4E-14
score: 53.8
coord: 361..408
e-value: 1.0E-14
score: 54.3
coord: 291..340
e-value: 2.5E-17
score: 62.7
coord: 641..681
e-value: 5.5E-10
score: 39.2
coord: 431..480
e-value: 3.0E-17
score: 62.4
coord: 502..550
e-value: 9.4E-17
score: 60.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 645..677
e-value: 2.6E-9
score: 34.7
coord: 574..608
e-value: 1.2E-6
score: 26.3
coord: 260..293
e-value: 4.2E-6
score: 24.6
coord: 609..642
e-value: 7.3E-6
score: 23.8
coord: 399..433
e-value: 7.6E-5
score: 20.6
coord: 294..327
e-value: 1.6E-9
score: 35.3
coord: 539..572
e-value: 4.2E-9
score: 34.0
coord: 504..538
e-value: 7.6E-8
score: 30.1
coord: 364..397
e-value: 1.7E-7
score: 29.0
coord: 680..712
e-value: 1.1E-6
score: 26.5
coord: 434..467
e-value: 3.5E-8
score: 31.1
coord: 329..362
e-value: 2.9E-7
score: 28.3
coord: 469..502
e-value: 1.9E-8
score: 32.0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 253..284
e-value: 9.8E-7
score: 28.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 11.268
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 607..641
score: 11.148
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 712..742
score: 5.952
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 537..571
score: 13.165
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 432..466
score: 12.781
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 572..606
score: 12.047
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 397..431
score: 12.068
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..396
score: 10.961
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 10.698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 467..501
score: 12.737
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 292..326
score: 13.417
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 642..676
score: 13.482
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 677..711
score: 11.455
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 502..536
score: 12.638
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 7.421
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 322..391
e-value: 2.5E-18
score: 68.2
coord: 231..321
e-value: 6.3E-19
score: 70.2
coord: 670..742
e-value: 3.1E-12
score: 48.4
coord: 592..669
e-value: 1.8E-20
score: 75.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 484..591
e-value: 2.4E-36
score: 126.8
coord: 392..483
e-value: 3.8E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 36..730
NoneNo IPR availablePANTHERPTHR24015:SF949SUBFAMILY NOT NAMEDcoord: 36..730
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 473..569
coord: 606..704

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C03G060900Lsi06G007700Bottle gourd (USVL1VR-Ls)lsiwmbB367
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G060900Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G060900Watermelon (97103) v1wmwmbB126
Cla97C03G060900Wax gourdwgowmbB636