Carg03902-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03902-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	V-ATPase proteolipid subunit
Location	Cucurbita_argyrosperma_scaffold_011 : 723978 .. 727192 (+)
Sequence length	2584

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGATACTCATCCGTCGATCTCCGCATTTTTCACATCAGGAACTCTCTTCCTCCAGGCGGATTTCAGATCAAATCGAAGTCGTCTTCGTAATTACTGCATCGATTTCAGAATCAAGGTCGGAAGCGGATAGATAATCATGTCGACCGCCGCCGTGATCGCACATTCTAGCTCCTGGTCTCGCGCTCTCATCAATATCTCTCCCTACACTTTCTCCGCCGTCGGTATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGTGCTGTCCCAACCCTATCTTATTTCGTTCTCTTTGCGTTTTACTTGATGAATGTTTATTTTGTTAATCCCTTTCTGAACGATGAAAATTTGAGCGGTTGCGTATTTTGTAGGGGGATTTACATAACGGGAAGCAGTTTGATTGGTGCCGCGATCAAAGCTCCTCGTATTACTTCGAAGAATTTGATCAGGTGAAGCGTTAACTCTAGTTGATGAATTGTTCATTTTCCTATTGATTGGATTGCTTCTTTTGAGACGGTCGGGTTGGGATGTATAATTAGGGATTCTTATTGCTAAATTCTTGCACTTATACAACTAAGAGCGACGAAACTCAAAGGTTTCATTTCATTACTTTGTTTAATTTTGAATCAATTGGAACAGAGTTGAACACAAGCCTTGAATTTTTGAAAAAAAAATTGTAATTCGTCCAACAAAGTCCAACCAATTTCAAGAACATAGCTACATTTTTCTGGCCATTATTTTGATTACAACGATTTGAATGCTGTGTTATTTCAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATCATCTTACAAACCAAGTTAGAGAGTGTTTCAGCGTCTCAGATTTATGCCCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCTAACCTTGTCTGCGGGTTTGATATCTTCTCTCTTACTTGGTTTATTCAATCAAAATCCTCGAATTTAGCTCTTCTGTTACGTTTCATTCTGATTGTTTGCTCTGAATCTTTTCTGATGCTTTGTTTGAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCGTTATCAGATGCCCAAAACTCCTCTCTTTTTGTGAAAATTCTTGTAATTGAGATCTTTGGCAGTGCGCTCGGGTTGTTCGGAGTGATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGACAGGTTGATCTACCTCTTCGATTTTGAACACGAGCTCAAAGTTCGATTACGATGAAGAGGGTAACTTGTTTTTCTTCCCTTGAGCCTAGTTGTTTGCCCCTTCATAGATAATGATTGTTCTTGTAAAAGCTAGAGTGGGGAGTTTGTATGCATTTTTTTATTGTTTGGGTTTCAATCCTATTCCCTTGGAGAACCATTCCATCATTCTGATGTTGGTATTAAATATTTCTTCTTCTGATTCCTTGAAAACACTCGAATCGTTCAATAAGTTATGTTGTAGGATTGCTTCTTTTCTAGCTTGTATGACATTTTCTTGCAAAATCTGTGTGTTCAGTTCTTGAATCGTTTATTAAACACTGGCATCTTTATATCTACTGTGTTCTTTGCTGTATTGTACTCTCTCGATTGAAGATCGTCTTTTAAAGCTTTTTAGCTACGGTATGCATCATCATGTATGCAAAGAAACACAAAAAGATTCACCATGAAAATGTACGAGTTTGCAATGATCAGTAACGAGGAAATTTAGGCTTGAATCTGAAACACGAGTATTTCTAATCGAAGCGGGTACTTATATCTTACAATCAAATTGATGCAAGATCTGGGTAGATGCTGTGTAGTTGAAAACTTGATATAGAATTCTCATTTGGTTAGGTATATAAAGGTTCCACATAACTCATTCATGATTAATGATGCGAAGGCTTGACTTGAAGCTGATTTATTTCATACGATTCAGTATACTTTTTAATCATACAATGTATCAAGTACAATTAACTGCAGCCAGAGAGACTAGCTTCCAACCGAAAAACCTGTCTTGAATGCATACTTTGGTTTTCTGCACATTCTTGACTATATAGGCTTCCTGGTCGTATCGATCAATTGAGGAACATCATTGAAGAAAGGAATGTTTTTCTGTTGAAGTTCTTGGCAATTCTCTGGCATAGCTACCTTCGGGTCGAAGGGTTCACGGTCAGGAAGATTCAAACCTTGCTTAAGCCTACCCATAAACCTAGAATGCAGGACTTGCTTCGAGCTTACAGGCAGTCGAACGGATTGATATTCTGCAAGGGCTGTTTGTAAGTTCTCCAGTCCCCATTTCTCAAGGCATTTGCCTAAAACAGCTGCATCTAATATGGACATGTTTGTACTTCTCAAGCCATGAGGAGTTGTGGGATGAGCTGCATCCCCAACCAATACTACATTGTCCCACACAAGTCTTTCCAATGGATTTCTATCATATATGACATTGATGAAAGGCTCTTTTGTTTCTTTGATGACTCTTGCGAACTCAGGAACCCAAACCTTCTCTGCTTGTTCATGCATCTTCCTCACCATCCCGTCGTCTACTTTCATGGTCAGCGACTTACCCTGTATTCATTTTGCTCATTCGTGTCAACCGATACAAACTATAGAACGAACTATTGTATTGAGGTTTACTCAGATCACATTTGGACGATCAATTACTACCTTGAGTTGTGGCTCTGGTTGATTTATATACCAAATCCAGTTGATCTTTTTGTTTGGAAGCTCATAGAGAACAATGTGAGTGCCAGATCCCAAATCAAAATACAAGCATTTCCCAAGATCAGGATACGCCTTTCGGATGTCGATTATCGTCTCTGAATTCTCATTCTCAGAGAAATCAAGCACTCCTCTCCAAGCACAATAACCAGAATATCTACACAAAACAATGAAATTGCTATTTGTCAGCATGAACATATACTTCAGCATTATGCTCCATTTTCATGTTCATATACCTCAACTGAAAGTTGGGAAGAAAGGTTTGAAGAACAGAAGAGAGACACCCATCTGCTCCAACAAGCAAATCCCCAACTATTTCAATAATCTCGTCAGTTTGCAAAACATTTGCTGCTATTTTCACAGAAGATTTATCCTCAGATGTGCAAAAAGAGAGGAATTGGTGACCCCATAGAAATATATCAGGAGGAAGCTCATTGTAGAGAAGGCCATGGAGGTCAGCCCAATGA

mRNA sequence

TCGATACTCATCCGTCGATCTCCGCATTTTTCACATCAGGAACTCTCTTCCTCCAGGCGGATTTCAGATCAAATCGAAGTCGTCTTCGTAATTACTGCATCGATTTCAGAATCAAGGTCGGAAGCGGATAGATAATCATGTCGACCGCCGCCGTGATCGCACATTCTAGCTCCTGGTCTCGCGCTCTCATCAATATCTCTCCCTACACTTTCTCCGCCGTCGGTATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATAACGGGAAGCAGTTTGATTGGTGCCGCGATCAAAGCTCCTCGTATTACTTCGAAGAATTTGATCAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATCATCTTACAAACCAAGTTAGAGAGTGTTTCAGCGTCTCAGATTTATGCCCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCTAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCGTTATCAGATGCCCAAAACTCCTCTCTTTTTGTGAAAATTCTTGTAATTGAGATCTTTGGCAGTGCGCTCGGGTTGTTCGGAGTGATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGACAGGTTGATCTACCTCTTCGATTTTGAACACGAGCTCAAAGTTCGATTACGATGAAGAGGGTAACTTGTTTTTCTTCCCTTGAGCCTAGTTGTTTGCCCCTTCATAGATAATGATTGTTCTTGTAAAAGCTAGAGTGGGGAGTTTGTATGCATTTTTTTATTGTTTGGGTTTCAATCCTATTCCCTTGGAGAACCATTCCATCATTCTGATGTTGGTATTAAATATTTCTTCTTCTGATTCCTTGAAAACACTCGAATCGTTCAATAAGTTATGTTGTAGGATTGCTTCTTTTCTAGCTTGTATGACATTTTCTTGCAAAATCTGTGTGTTCAGTTCTTGAATCGTTTATTAAACACTGGCATCTTTATATCTACTGTGTTCTTTGCTGTATTGTACTCTCTCGATTGAAGATCGTCTTTTAAAGCTTTTTAGCTACGGTATGCATCATCATGTATGCAAAGAAACACAAAAAGATTCACCATGAAAATGTACGAGTTTGCAATGATCAGTAACGAGGAAATTTAGGCTTGAATCTGAAACACGAGTATTTCTAATCGAAGCGGGTACTTATATCTTACAATCAAATTGATGCAAGATCTGGGTAGATGCTGTGTAGTTGAAAACTTGATATAGAATTCTCATTTGGTTAGGTATATAAAGGTTCCACATAACTCATTCATGATTAATGATGCGAAGGCTTGACTTGAAGCTGATTTATTTCATACGATTCAGTATACTTTTTAATCATACAATGTATCAAGTACAATTAACTGCAGCCAGAGAGACTAGCTTCCAACCGAAAAACCTGTCTTGAATGCATACTTTGGTTTTCTGCACATTCTTGACTATATAGGCTTCCTGGTCGTATCGATCAATTGAGGAACATCATTGAAGAAAGGAATGTTTTTCTGTTGAAGTTCTTGGCAATTCTCTGGCATAGCTACCTTCGGGTCGAAGGGTTCACGGTCAGGAAGATTCAAACCTTGCTTAAGCCTACCCATAAACCTAGAATGCAGGACTTGCTTCGAGCTTACAGGCAGTCGAACGGATTGATATTCTGCAAGGGCTGTTTGTAAGTTCTCCAGTCCCCATTTCTCAAGGCATTTGCCTAAAACAGCTGCATCTAATATGGACATGTTTGTACTTCTCAAGCCATGAGGAGTTGTGGGATGAGCTGCATCCCCAACCAATACTACATTGTCCCACACAAGTCTTTCCAATGGATTTCTATCATATATGACATTGATGAAAGGCTCTTTTGTTTCTTTGATGACTCTTGCGAACTCAGGAACCCAAACCTTCTCTGCTTGTTCATGCATCTTCCTCACCATCCCGTCGTCTACTTTCATGGTCAGCGACTTACCCTGTATTCATTTTGCTCATTCGTGTCAACCGATACAAACTATAGAACGAACTATTGTATTGAGGTTTACTCAGATCACATTTGGACGATCAATTACTACCTTGAGTTGTGGCTCTGGTTGATTTATATACCAAATCCAGTTGATCTTTTTGTTTGGAAGCTCATAGAGAACAATGTGAGTGCCAGATCCCAAATCAAAATACAAGCATTTCCCAAGATCAGGATACGCCTTTCGGATGTCGATTATCGTCTCTGAATTCTCATTCTCAGAGAAATCAAGCACTCCTCTCCAAGCACAATAACCAGAATATCTCAACTGAAAGTTGGGAAGAAAGGTTTGAAGAACAGAAGAGAGACACCCATCTGCTCCAACAAGCAAATCCCCAACTATTTCAATAATCTCGTCAGTTTGCAAAACATTTGCTGCTATTTTCACAGAAGATTTATCCTCAGATGTGCAAAAAGAGAGGAATTGGTGACCCCATAGAAATATATCAGGAGGAAGCTCATTGTAGAGAAGGCCATGGAGGTCAGCCCAATGA

Coding sequence (CDS)

ATGTCGACCGCCGCCGTGATCGCACATTCTAGCTCCTGGTCTCGCGCTCTCATCAATATCTCTCCCTACACTTTCTCCGCCGTCGGTATCGCCATCGCCATCGGCGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATAACGGGAAGCAGTTTGATTGGTGCCGCGATCAAAGCTCCTCGTATTACTTCGAAGAATTTGATCAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATCATCTTACAAACCAAGTTAGAGAGTGTTTCAGCGTCTCAGATTTATGCCCCCGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCTAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCGTTATCAGATGCCCAAAACTCCTCTCTTTTTGTGAAAATTCTTGTAATTGAGATCTTTGGCAGTGCGCTCGGGTTGTTCGGAGTGATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGACAGGTTGA

Protein sequence

MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAKTG

Homology

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BLAST of Carg03902-RA vs. NCBI nr
Match: XP_022951859.1 (V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type proton ATPase subunit c''2 [Cucurbita maxima] >XP_023536708.1 V-type proton ATPase subunit c''2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Carg03902-RA vs. NCBI nr
Match: XP_023547273.1 (V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 3.7e-71
Identity = 172/182 (94.51%), Postives = 175/182 (96.15%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTA ++A SSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVS+SQIYAPESLRAGYAIFASGII XX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSSSQIYAPESLRAGYAIFASGIIVXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXX    ALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Carg03902-RA vs. NCBI nr
Match: XP_022962488.1 (V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-type proton ATPase subunit c''1-like [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A ++A SSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
           TG
Sbjct: 181 TG 182

[Close]

BLAST of Carg03902-RA vs. NCBI nr
Match: XP_008445147.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 6.2e-71
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAV+A SSSW+RAL+NISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
            G
Sbjct: 181 RG 182

[Close]

BLAST of Carg03902-RA vs. NCBI nr
Match: XP_004138742.1 (PREDICTED: V-type proton ATPase subunit c''1-like [Cucumis sativus] >KGN62907.1 hypothetical protein Csa_2G379870 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 4.0e-70
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTA V+  SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
            G
Sbjct: 181 RG 182

[Close]

BLAST of Carg03902-RA vs. TAIR10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 236.5 bits (602), Expect = 1.3e-62
Identity = 153/177 (86.44%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 4   AAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           + V  H+SSW  AL+ ISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXXXXX 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFAS   XXXXXX
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASXXXXXXXXX 121

Query: 124 XXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           XXXXXXXXXXXXXALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 122 XXXXXXXXXXXXXALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of Carg03902-RA vs. TAIR10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.1e-60
Identity = 138/210 (65.71%), Postives = 149/210 (70.95%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    + H+SSW  AL+ ISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGII--- 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGII   
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ---------------------------XXXXXXXXXXXXXXXXXXXALSDAQNSSLFVKI 180
                                                         ALSDAQNS+LFVKI
Sbjct: 121 ANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKI 180

[Close]

BLAST of Carg03902-RA vs. TAIR10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-11
Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIXXXXXXXXXXXXXXXXXXXALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+ XXXXXXXXXXXXXXXX     ++AQ  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVRANAQQP 133

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

[Close]

BLAST of Carg03902-RA vs. TAIR10
Match: AT2G16510.1 (ATPase, F0/V0 complex, subunit C protein)

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-11
Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 13  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 72

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIXXXXXXXXXXXXXXXXXXXALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+ XXXXXXXXXXXXXXXX     ++AQ  
Sbjct: 73  VIISTGINPKAKSYY-----LFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVRANAQQP 132

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 133 KLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]

BLAST of Carg03902-RA vs. TAIR10
Match: AT4G38920.1 (vacuolar-type H(+)-ATPase C3)

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-11
Identity = 62/151 (41.06%), Postives = 93/151 (61.59%), Query Frame = 0


Query: 25  FSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 13  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 72

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIXXXXXXXXXXXXXXXXXXXALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+ XXXXXXXXXXXXXXXX     ++AQ  
Sbjct: 73  VIISTGINPKAKSYY-----LFDGYAHLSSGLAXXXXXXXXXXXXXXXXDAGVRANAQQP 132

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 133 KLFVGMILILIFAEALALYGLIVGIILSSRA 158

[Close]

BLAST of Carg03902-RA vs. Swiss-Prot
Match: sp|Q9SZY7|VATO1_ARATH (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 6.1e-62
Identity = 154/180 (85.56%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    + H+SSW  AL+ ISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFAS   XXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

[Close]

BLAST of Carg03902-RA vs. Swiss-Prot
Match: sp|Q9SLA2|VATO2_ARATH (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-61
Identity = 153/177 (86.44%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 4   AAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           + V  H+SSW  AL+ ISPYTFSA+GIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXXXXX 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFAS   XXXXXX
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASXXXXXXXXX 121

Query: 124 XXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           XXXXXXXXXXXXXALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 122 XXXXXXXXXXXXXALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

[Close]

BLAST of Carg03902-RA vs. Swiss-Prot
Match: sp|P23968|VATO_YEAST (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.2e-38
Identity = 84/165 (50.91%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 12  SWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVI 71
           ++ + L+  SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+I
Sbjct: 46  NFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISII 105

Query: 72  FCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXXXXXXXXXXXXX 131
           FCE VAIYG+I+AI+  +KL   +A  +Y+  +L  GY++F +GI               
Sbjct: 106 FCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGI 165

Query: 132 XXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 177
                A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +AS
Sbjct: 166 TGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

[Close]

BLAST of Carg03902-RA vs. Swiss-Prot
Match: sp|Q91V37|VATO_MOUSE (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-34
Identity = 82/160 (51.25%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 17  LINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSASQIYA--PESLRAGYAIFASGIIXXXXXXXXXXXXXXXXX 136
           AIYG+I+AI++    E  SA++  A    +  AGY++F +G+                  
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 XXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of Carg03902-RA vs. Swiss-Prot
Match: sp|Q2TA24|VATO_BOVIN (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-34
Identity = 81/160 (50.62%), Postives = 111/160 (69.38%), Query Frame = 0


Query: 17  LINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSAS--QIYAPESLRAGYAIFASGIIXXXXXXXXXXXXXXXXX 136
           AIYG+I+AI++    E  SA+  +     +  AGY++F +G+                  
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 XXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

[Close]

BLAST of Carg03902-RA vs. TrEMBL
Match: tr|A0A1S3BBZ9|A0A1S3BBZ9_CUCME (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.1e-71
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTAAV+A SSSW+RAL+NISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
            G
Sbjct: 181 RG 182

[Close]

BLAST of Carg03902-RA vs. TrEMBL
Match: tr|A0A0A0LQ28|A0A0A0LQ28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSTA V+  SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 TG 183
            G
Sbjct: 181 RG 182

[Close]

BLAST of Carg03902-RA vs. TrEMBL
Match: tr|V4UCM0|V4UCM0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009643mg PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 9.5e-68
Identity = 169/180 (93.89%), Postives = 175/180 (97.22%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS + ++  SSSWSRAL+NISPYTFSA+GIA+AIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSGSVMLGESSSWSRALVNISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV ASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

[Close]

BLAST of Carg03902-RA vs. TrEMBL
Match: tr|A0A2H5Q688|A0A2H5Q688_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_199830 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.7e-67
Identity = 168/180 (93.33%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS + ++  SSSWSRAL+ ISPYTFSA+GIA+AIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSGSVMLGESSSWSRALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV ASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

[Close]

BLAST of Carg03902-RA vs. TrEMBL
Match: tr|Q84V02|Q84V02_CITLI (Vacuolar membrane ATPase subunit c OS=Citrus limon OX=2708 GN=VMA16 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.7e-67
Identity = 168/180 (93.33%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS + ++  SSSWSRAL+ ISPYTFSA+GIA+AIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSGSVMLGESSSWSRALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIXXX 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV ASQIYAPESLRAGYAIFASGIIXXX
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPASQIYAPESLRAGYAIFASGIIXXX 120

Query: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 XXXXXXXXXXXXXXXXALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

The following BLAST results are available for this feature:

BLAST of Carg03902-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951859.1	2.3e-73	100.00	V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type pr...	[more]
XP_023547273.1	3.7e-71	94.51	V-type proton ATPase subunit c''1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962488.1	4.8e-71	97.25	V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-ty...	[more]
XP_008445147.1	6.2e-71	96.70	PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo]	[more]
XP_004138742.1	4.0e-70	96.15	PREDICTED: V-type proton ATPase subunit c''1-like [Cucumis sativus] >KGN62907.1 ...	[more]

BLAST of Carg03902-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25610.1	1.3e-62	86.44	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	2.1e-60	65.71	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G19910.1	6.7e-11	41.06	ATPase, F0/V0 complex, subunit C protein	[more]
AT2G16510.1	6.7e-11	41.06	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G38920.1	6.7e-11	41.06	vacuolar-type H(+)-ATPase C3	[more]

BLAST of Carg03902-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SZY7\|VATO1_ARATH	6.1e-62	85.56	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
sp\|Q9SLA2\|VATO2_ARATH	2.3e-61	86.44	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
sp\|P23968\|VATO_YEAST	6.2e-38	50.91	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
sp\|Q91V37\|VATO_MOUSE	1.4e-34	51.25	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
sp\|Q2TA24\|VATO_BOVIN	2.4e-34	50.63	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of Carg03902-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBZ9\|A0A1S3BBZ9_CUCME	4.1e-71	96.70	V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 S...	[more]
tr\|A0A0A0LQ28\|A0A0A0LQ28_CUCSA	2.7e-70	96.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1	[more]
tr\|V4UCM0\|V4UCM0_9ROSI	9.5e-68	93.89	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009643mg PE=3 ...	[more]
tr\|A0A2H5Q688\|A0A2H5Q688_CITUN	4.7e-67	93.33	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_199830 PE=3 SV=1	[more]
tr\|Q84V02\|Q84V02_CITLI	4.7e-67	93.33	Vacuolar membrane ATPase subunit c OS=Citrus limon OX=2708 GN=VMA16 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179	proton-transporting V-type ATPase, V0 domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0015078	hydrogen ion transmembrane transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015991	ATP hydrolysis coupled proton transport

Vocabulary: **INTERPRO**
Term	Definition
IPR035921	F/V-ATP_Csub_sf
IPR002379	ATPase_proteolipid_c-like_dom
IPR000245	ATPase_proteolipid_csu

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
molecular_function	GO:0015078	hydrogen ion transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg03902	Carg03902	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg03902-RA	Carg03902-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03902-RA.exon.1	Carg03902-RA.exon.1	exon
Carg03902-RA.exon.2	Carg03902-RA.exon.2	exon
Carg03902-RA.exon.3	Carg03902-RA.exon.3	exon
Carg03902-RA.exon.4	Carg03902-RA.exon.4	exon
Carg03902-RA.exon.5	Carg03902-RA.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03902-RA.five_prime_UTR.1	Carg03902-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03902-RA.CDS.1	Carg03902-RA.CDS.1	CDS
Carg03902-RA.CDS.2	Carg03902-RA.CDS.2	CDS
Carg03902-RA.CDS.3	Carg03902-RA.CDS.3	CDS
Carg03902-RA.CDS.4	Carg03902-RA.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg03902-RA.three_prime_UTR.1	Carg03902-RA.three_prime_UTR.1	three_prime_UTR
Carg03902-RA.three_prime_UTR.2	Carg03902-RA.three_prime_UTR.2	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 67..91 score: 34.11 coord: 123..149 score: 35.96 coord: 41..65 score: 23.26 coord: 150..173 score: 47.15
None	No IPR available	GENE3D	G3DSA:1.20.120.610		coord: 22..177 e-value: 1.2E-55 score: 189.1
None	No IPR available	PANTHER	PTHR10263:SF18	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 9..177
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 9..177
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 29..87 e-value: 8.1E-15 score: 54.8 coord: 112..171 e-value: 7.0E-10 score: 39.0
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	SSF81333	F1F0 ATP synthase subunit C	coord: 104..172
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	SSF81333	F1F0 ATP synthase subunit C	coord: 21..90