Carg17859 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTTATGAGTACGAACACTCCTCCATTCCCGCCACCCCCGTCACCGTCAAGAAGATCTTCAACCTCCCATCTCCCTTCCTCACCAAGAGGGACAAGTGGGCCAGATCCTTCAAGTTCATCCTCCCAAACCCGACCTCCCCGAGAACCGACTATCCCGGTGAGTCCAAAACATCAATCTTACTATAAACCAAACCGGACGTATCATTTTTTATGATCTATTTTAAACTTACAAATCTATCTATCAATTTCGATATAGAACAACTCCCAGCGCCAGTGAACATCAGGAACAGCCCGGCGAACAAATCAGCCATACTCACCGAGTTTCAGCAGGAGCTGATGCAGTTGGCTATAGCGTTGAAAGAAGAGTATATCCTCAGTAGTTACCCTGAACCTTTGGGAAATGATATGACTGTGAAGGAAGGTAGGAATATATAA ATGTTTTATGAGTACGAACACTCCTCCATTCCCGCCACCCCCGTCACCGTCAAGAAGATCTTCAACCTCCCATCTCCCTTCCTCACCAAGAGGGACAAGTGGGCCAGATCCTTCAAGTTCATCCTCCCAAACCCGACCTCCCCGAGAACCGACTATCCCGAACAACTCCCAGCGCCAGTGAACATCAGGAACAGCCCGGCGAACAAATCAGCCATACTCACCGAGTTTCAGCAGGAGCTGATGCAGTTGGCTATAGCGTTGAAAGAAGAGTATATCCTCAGTAGTTACCCTGAACCTTTGGGAAATGATATGACTGTGAAGGAAGGTAGGAATATATAA ATGTTTTATGAGTACGAACACTCCTCCATTCCCGCCACCCCCGTCACCGTCAAGAAGATCTTCAACCTCCCATCTCCCTTCCTCACCAAGAGGGACAAGTGGGCCAGATCCTTCAAGTTCATCCTCCCAAACCCGACCTCCCCGAGAACCGACTATCCCGAACAACTCCCAGCGCCAGTGAACATCAGGAACAGCCCGGCGAACAAATCAGCCATACTCACCGAGTTTCAGCAGGAGCTGATGCAGTTGGCTATAGCGTTGAAAGAAGAGTATATCCTCAGTAGTTACCCTGAACCTTTGGGAAATGATATGACTGTGAAGGAAGGTAGGAATATATAA MFYEYEHSSIPATPVTVKKIFNLPSPFLTKRDKWARSFKFILPNPTSPRTDYPEQLPAPVNIRNSPANKSAILTEFQQELMQLAIALKEEYILSSYPEPLGNDMTVKEGRNI
BLAST of Carg17859 vs. NCBI nr
Match: XP_022961008.1 (non-specific phospholipase C2 [Cucurbita moschata]) HSP 1 Score: 156.8 bits (395), Expect = 4.4e-35 Identity = 82/107 (76.64%), Postives = 88/107 (82.24%), Query Frame = 0
BLAST of Carg17859 vs. NCBI nr
Match: XP_022988071.1 (non-specific phospholipase C2-like [Cucurbita maxima]) HSP 1 Score: 154.1 bits (388), Expect = 2.9e-34 Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Carg17859 vs. NCBI nr
Match: XP_023516121.1 (non-specific phospholipase C2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34 Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Carg17859 vs. NCBI nr
Match: XP_023516504.1 (non-specific phospholipase C2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34 Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Carg17859 vs. NCBI nr
Match: XP_023516593.1 (non-specific phospholipase C2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.9 bits (385), Expect = 6.4e-34 Identity = 80/107 (74.77%), Postives = 87/107 (81.31%), Query Frame = 0
BLAST of Carg17859 vs. TAIR10
Match: AT2G26870.1 (non-specific phospholipase C2) HSP 1 Score: 123.2 bits (308), Expect = 9.8e-29 Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of Carg17859 vs. TAIR10
Match: AT3G48610.1 (non-specific phospholipase C6) HSP 1 Score: 102.8 bits (255), Expect = 1.4e-22 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of Carg17859 vs. TAIR10
Match: AT1G07230.1 (non-specific phospholipase C1) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-19 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 0
BLAST of Carg17859 vs. TAIR10
Match: AT3G03540.1 (non-specific phospholipase C5) HSP 1 Score: 78.6 bits (192), Expect = 2.8e-15 Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Carg17859 vs. TAIR10
Match: AT3G03520.1 (non-specific phospholipase C3) HSP 1 Score: 77.0 bits (188), Expect = 8.1e-15 Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Carg17859 vs. Swiss-Prot
Match: sp|O81020|NPC2_ARATH (Non-specific phospholipase C2 OS=Arabidopsis thaliana OX=3702 GN=NPC2 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.8e-27 Identity = 64/107 (59.81%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of Carg17859 vs. Swiss-Prot
Match: sp|Q8H965|NPC6_ARATH (Non-specific phospholipase C6 OS=Arabidopsis thaliana OX=3702 GN=NPC6 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.5e-21 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of Carg17859 vs. Swiss-Prot
Match: sp|Q8L7Y9|NPC1_ARATH (Non-specific phospholipase C1 OS=Arabidopsis thaliana OX=3702 GN=NPC1 PE=2 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-18 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 0
BLAST of Carg17859 vs. Swiss-Prot
Match: sp|Q9S816|NPC5_ARATH (Non-specific phospholipase C5 OS=Arabidopsis thaliana OX=3702 GN=NPC5 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 5.0e-14 Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Carg17859 vs. Swiss-Prot
Match: sp|Q9SRQ6|NPC3_ARATH (Non-specific phospholipase C3 OS=Arabidopsis thaliana OX=3702 GN=NPC3 PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13 Identity = 50/106 (47.17%), Postives = 65/106 (61.32%), Query Frame = 0
BLAST of Carg17859 vs. TrEMBL
Match: tr|A0A0A0LXS4|A0A0A0LXS4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629050 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 6.8e-32 Identity = 73/107 (68.22%), Postives = 84/107 (78.50%), Query Frame = 0
BLAST of Carg17859 vs. TrEMBL
Match: tr|A0A1S3BP25|A0A1S3BP25_CUCME (non-specific phospholipase C2 OS=Cucumis melo OX=3656 GN=LOC103491977 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Carg17859 vs. TrEMBL
Match: tr|B9HNG8|B9HNG8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G069900v3 PE=4 SV=2) HSP 1 Score: 135.6 bits (340), Expect = 7.0e-29 Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of Carg17859 vs. TrEMBL
Match: tr|A0A2I4F1H1|A0A2I4F1H1_9ROSI (non-specific phospholipase C2 OS=Juglans regia OX=51240 GN=LOC108994653 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.2e-28 Identity = 67/106 (63.21%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Carg17859 vs. TrEMBL
Match: tr|V4U5Z8|V4U5Z8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10014860mg PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.6e-28 Identity = 66/107 (61.68%), Postives = 84/107 (78.50%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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