Carg16447 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTGTCCGCTACTCGATTCAAACTCCAATACTGACAAAAACCAAATTTCAAATCCCTCCATCAAATCAAATGGGTTCCCGTAATTCACTTCTCCACTGTTCGTCAAGAAAGTAAAAAATGGCGAACGGATCATTACCCTAATCCTTAATTCTGCTACACAAATGAAGATGAAGAAGATGAACATCCCGCCGCTATCTGTTTTTATCTGTAAGTTCTGATATGGGTTTTGTTTTTTAGGGGAGGAAACTCATTGTGGGGTCATGGATATTCATTTTCCCTTGTCGTTTGACTGATTTCTTGAGCCGAATTTTCCCGAGAAAATTCTGGGTTTGTCTTCTACGATGTAAATCCATATGGGTTTTAAAGATCTGATGAAAATTTGAATGAAATTTCGTCAAACGTGTTGTAATTTACGAGTTTCAATCATTTATTTCTTTATTCTCTATTCGTCGACCTATATTATTAAATGCACGCAACTGCCCTCTCCCACATGCAGATGCATCACTTTAGGTTTCACATAGCATCCTCGTGAGACCATTTATTGCGGGTCTTACAAAATTCCTTGGATGAACTTGTATAGAAATAGCTTGAGGCTAATTTCTTGGATCCAAATATTGTTGTTCTACCCATGTCTGTTCTTGAGGTTGATCCATTGCTGAAGGATTTGAATGAGAAGAAACAGAGTTTTAGGAGAAATGTTGTGTCGTTGGCGGCGGAGTTAAAGGAGGCTCGAAATCGCCTTTCTTCTCAAGAAGAATCGTTTGTTAAAGAGGCTCAAACAAGGCAGGTATGTGATTTTGGGTGTTTTCTTTGAAGCTTTTGACTCAATAAACCTCGTTTTAGGCGTTGTTTTCTTGTGGGTTTGATGGGATTTTGAGTTTGAGTGATGTTTTGAGGTGTTTTTTCAGGAAGCAGAGGCTAAGACTATGATTATGGAACGAGAAATTGGGAGATTGCATGTGGAATTGGATGAGAAGGATGAACAACTCAAGACTTCTGCAAGTACAGCCACCAAGGTTTGAATCCCAAATCAGTTTCTTATAGAACTTTTCATTAAGTAATGAACTGGGGCCTGCGTAGATCCTTTGAAGTTGTATTGTTTATTGATGCTTTTGGCTATCATATTCTGGTTGTGATTGCTGTACTTTTCTCTTTATGGGTCAGTTTGGAGCAATAAAGTGCCCAAAAGGTCCAGCATCTAAGCCTCACCTCCCTTAATGCCTTTTTCTTTTGCCCTCTTTGTTTTCCTCCTTTCTTCTTTAGTGGGAAGATAGTTGGGGAAGTACGATTTGGTTACTTTTTTAGGACAATATTTGCTAGCGGTGGGCTTGGATTATTACAAATGGTATTAGGGCACCGGGCAGTGTGCCGGCGACGTCCTCGCCCTGAAGAGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGGGAATGAGTGCCAGCGAGGACGTTGGGCCTCGAAGGGGGGTGGATTGTGAGATTCCATGTTGGTTGGAGAGGGGAACGAAATATTCTTTATAAGGGTGTGGAGACTTCTCTCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGTCTAAAGAGGACAATATTTGCTAGTGGTGGGTTTGGGCTGTTACAAATGGTATCAGGGCCGGACACTGGGCAATGTGCCAGCGAGGACGTTGAGCCCTGAAGAGGGGTGGATTGTGAGATCCCACATTGATTGAAGAAGGGAACGAGTGCCAGCGAGGACGTTGGGGCCTGAAAGGGGGGTGGATTGTGAGATTTCACATCAGTTAGAGAGGGGAACGGAATATTGTTTATAAGGGTGTGGAGACCACACGTTTAAAAAACCTTGAGGAGAAAACCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTACAAATGATATTAGAGCCAGAGACCGGGCAGTGTGCCAGCGAGAACGCTGAGCCTCAAAGGGGGGTGGATTGTGAGATCCCACATTGATTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAATCTCTCCCTAGTAAACACGTTTTAAAACCTCAAGGGGAAGCTCGGATGGGAAAACCCAAAGAAGACAATATCTGCAAGCCTACAAGCCCACACCGTTACATGTAGACTTTGCTCGTGTCTTTACCTGAATAAGAATTGTAGCAAACAACCAAACACTGCCTTCCTTTTCTTGAGCTATCTGGTTTATAATTCCTCCCTACTTTTTGTAATCAATATACCAATTCTCTATTACCTTCATAGGAGTTCTTACTTGCATTATAACCCAGCAATATGATGGTAGCTTCTCAGATTCGTTAGCTTATTTAAATTCGTTAAGGTGTTATCAACGTACATTATCGATGAATGTTACCGACATGTTGTTCAATGCAGTACCTCCACGAGCTGGATGGACTGAGACTACAGCTCGCTGCCACTCAAGCAACAGCTGATGCAAGTGCTGCCTCAGCTCAATCAGCACAGAACCAGTGTTTAGCGCTTTTGAAGGAACTAGACGAAAAGAACACGTCTTTAAAAGAGCACGAAGATCGTGTAAAAAGGTTGGGAGAACAACTCGACGATCTACAGAAAGATCTCGTGGCAAGGGAATCATCTCAGAAGCAGCTGAAAGATGAAGTGTTGAGAGTTGAGCATGAGATTATGGAAGCTCTAGCCAAATCTGGTGTGAGCAAGGATTGTGAATTGAGGAAGATATTAGATGAGGTTTCTCCCAAGAATGTTGTGAAGATCAATAGGTTGTTGATTGCAAAAGACGAAGAGATAGCAAGATTAAGAAATGAAATCAAGACAATGACTGCTCACTGGAAGCTGAAAACCAAGGAGTTGGAATCACAAGTATGTAAACTTCTTTGGCTCGATTGCGTATAGTGTACTTTCTCGTATTGTTTTCGTGTTCGTTTATGTATTTTGATGTTCTTATCGACAGTTAGAGAAACAACGACGAGCTGACCAAGAACTGAAGAAGAGGGTGTTGAAGCTGGAGTTCTGTTTACAAGAAGCTCGCACTCAAACACGAAAACTTCAAAGGGTAAACACTTTGATTTGTTTAGAATTGGACGGTTTATTAGCTTTAGTGTAGATAAGACTTAATTCATTGGCTTGGTGGGATATTGTTTTTGGACCACCTTTCATGGTTGTGAGATCCCACGTTGATTGGAGAGGGGAATGAAACTTTCCTTATAAGGGTGTGGAAATATCTCCCAAGTAGACACGTTTTAAAACCGTGAGGCTGACGGTGATATGTAATGGGCCAAAGTGGACAATATCTGCTAGCGGTGGACTTGGGCTATTACAAATGGTATCAGAGCCAGACATTGGGTGGTGTGCCAACGAGGATGCTGGGCCTCCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACAAAACTTTCCTTATAAAGGTAGAAACCTCTCCCTACCAGACGTGTTTTAAAATCATGAGGTTGACGGCGATACGTAATGGGCCAAAGCAGGCAATATTTGCTAGCGGTGGGCTTGGGCTGTTACATGTGCCAGCGAGGACGTTGGGCCCCTAAGGGCGGTGGATTGTGAGATCCCACATTGGTTGTGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCTAAACATCAAGTGATGTGCCAACGAGAATGTTGGGCCCACATTGGTTGGAGAGAGGAACAAAACTTTCCTTATAAGGGTGTGGAAACCTCTCCCGATTAGACACGTTTTAAAATCGTGAGGCTCATGACGATACGTAACGTATCAAAATGGACAAATATCTACTAACAATGGGCTTGGGCTGTTATAAAAAGACTCTTTCAAATGAAAGATCAGCGAATGAACCGGAACCAGTAATTCCTTGTATTCGCTTCCCTTATTGAATGAAGGAAGTAAACCCAAGGAGTGTGGACGGTGAGATCGCACATTGGTTGGAGAGGGGAACGAAACTTTCCTTATAAGGGTGTAGAAACCTCTCCCTAGCAGACGCGTTTTTAAAACCATGAGGTTAACGACAATATCTACTAATGCCGCTTGAGCTGTTCCAGTAGCCTAGACCATAAAACCAATATTGAAAAACTGGTTTCCTTACTAACCCTCATACAAAAATAATGTACGAGTTGGTCTTATAGATGAAACTAACATGTATTTGGTTCGTAACAGATTGGAGAACGACGGGAGAAAGCCATAAAGGAACTTCGAGATCAGTTGGCAGGAAAGCAAGGTGGAGCTAGTTCTACTACCGAATCTGAAAAACTAAAGTTTTGGGAAACCTCGGGGTTCAAGGTTATGGCTTCGATGTCGATGTTGATACTCGTAGTATTTTCGAAGCGATGAGGTACATCATTAGAATGTATAGTAGTGTAGGAAGTAGCATGGTAGAGGAGAACTTTGTTCTTGTTCTCCATTTACAGATTTACAGAGGAAGTGATTCTGTATTTATATGTAGAACAGCCTATCTTAGGCTAGCAACTAATTGTAGCCACTCATCTAGGTCATATAGAAACTTGGTCAAATTCGAGACTTCGACTAACGGTATTTGTTCGTTACTATCTCGATTTCTAGTGTTTCTTGTTTTGTAGGTCA TCTGTCCGCTACTCGATTCAAACTCCAATACTGACAAAAACCAAATTTCAAATCCCTCCATCAAATCAAATGGGTTCCCGTAATTCACTTCTCCACTGTTCGTCAAGAAAGTAAAAAATGGCGAACGGATCATTACCCTAATCCTTAATTCTGCTACACAAATGAAGATGAAGAAGATGAACATCCCGCCGCTATCTGTTTTTATCTATGCATCACTTTAGGTTTCACATAGCATCCTCGTGAGACCATTTATTGCGGGTCTTACAAAATTCCTTGGATGAACTTGTATAGAAATAGCTTGAGGCTAATTTCTTGGATCCAAATATTGTTGTTCTACCCATGTCTGTTCTTGAGGTTGATCCATTGCTGAAGGATTTGAATGAGAAGAAACAGAGTTTTAGGAGAAATGTTGTGTCGTTGGCGGCGGAGTTAAAGGAGGCTCGAAATCGCCTTTCTTCTCAAGAAGAATCGTTTGTTAAAGAGGCTCAAACAAGGCAGGAAGCAGAGGCTAAGACTATGATTATGGAACGAGAAATTGGGAGATTGCATGTGGAATTGGATGAGAAGGATGAACAACTCAAGACTTCTGCAAGTACAGCCACCAAGTACCTCCACGAGCTGGATGGACTGAGACTACAGCTCGCTGCCACTCAAGCAACAGCTGATGCAAGTGCTGCCTCAGCTCAATCAGCACAGAACCAGTGTTTAGCGCTTTTGAAGGAACTAGACGAAAAGAACACGTCTTTAAAAGAGCACGAAGATCGTGTAAAAAGGTTGGGAGAACAACTCGACGATCTACAGAAAGATCTCGTGGCAAGGGAATCATCTCAGAAGCAGCTGAAAGATGAAGTGTTGAGAGTTGAGCATGAGATTATGGAAGCTCTAGCCAAATCTGGTGTGAGCAAGGATTGTGAATTGAGGAAGATATTAGATGAGGTTTCTCCCAAGAATGTTGTGAAGATCAATAGGTTGTTGATTGCAAAAGACGAAGAGATAGCAAGATTAAGAAATGAAATCAAGACAATGACTGCTCACTGGAAGCTGAAAACCAAGGAGTTGGAATCACAATTAGAGAAACAACGACGAGCTGACCAAGAACTGAAGAAGAGGGTGTTGAAGCTGGAGTTCTGTTTACAAGAAGCTCGCACTCAAACACGAAAACTTCAAAGGATTGGAGAACGACGGGAGAAAGCCATAAAGGAACTTCGAGATCAGTTGGCAGGAAAGCAAGGTGGAGCTAGTTCTACTACCGAATCTGAAAAACTAAAGTTTTGGGAAACCTCGGGGTTCAAGGTTATGGCTTCGATGTCGATGTTGATACTCGTAGTATTTTCGAAGCGATGAGGTACATCATTAGAATGTATAGTAGTGTAGGAAGTAGCATGGTAGAGGAGAACTTTGTTCTTGTTCTCCATTTACAGATTTACAGAGGAAGTGATTCTGTATTTATATGTAGAACAGCCTATCTTAGGCTAGCAACTAATTGTAGCCACTCATCTAGGTCATATAGAAACTTGGTCAAATTCGAGACTTCGACTAACGGTATTTGTTCGTTACTATCTCGATTTCTAGTGTTTCTTGTTTTGTAGGTCA ATGTCTGTTCTTGAGGTTGATCCATTGCTGAAGGATTTGAATGAGAAGAAACAGAGTTTTAGGAGAAATGTTGTGTCGTTGGCGGCGGAGTTAAAGGAGGCTCGAAATCGCCTTTCTTCTCAAGAAGAATCGTTTGTTAAAGAGGCTCAAACAAGGCAGGAAGCAGAGGCTAAGACTATGATTATGGAACGAGAAATTGGGAGATTGCATGTGGAATTGGATGAGAAGGATGAACAACTCAAGACTTCTGCAAGTACAGCCACCAAGTACCTCCACGAGCTGGATGGACTGAGACTACAGCTCGCTGCCACTCAAGCAACAGCTGATGCAAGTGCTGCCTCAGCTCAATCAGCACAGAACCAGTGTTTAGCGCTTTTGAAGGAACTAGACGAAAAGAACACGTCTTTAAAAGAGCACGAAGATCGTGTAAAAAGGTTGGGAGAACAACTCGACGATCTACAGAAAGATCTCGTGGCAAGGGAATCATCTCAGAAGCAGCTGAAAGATGAAGTGTTGAGAGTTGAGCATGAGATTATGGAAGCTCTAGCCAAATCTGGTGTGAGCAAGGATTGTGAATTGAGGAAGATATTAGATGAGGTTTCTCCCAAGAATGTTGTGAAGATCAATAGGTTGTTGATTGCAAAAGACGAAGAGATAGCAAGATTAAGAAATGAAATCAAGACAATGACTGCTCACTGGAAGCTGAAAACCAAGGAGTTGGAATCACAATTAGAGAAACAACGACGAGCTGACCAAGAACTGAAGAAGAGGGTGTTGAAGCTGGAGTTCTGTTTACAAGAAGCTCGCACTCAAACACGAAAACTTCAAAGGATTGGAGAACGACGGGAGAAAGCCATAAAGGAACTTCGAGATCAGTTGGCAGGAAAGCAAGGTGGAGCTAGTTCTACTACCGAATCTGAAAAACTAAAGTTTTGGGAAACCTCGGGGTTCAAGGTTATGGCTTCGATGTCGATGTTGATACTCGTAGTATTTTCGAAGCGATGA MSVLEVDPLLKDLNEKKQSFRRNVVSLAAELKEARNRLSSQEESFVKEAQTRQEAEAKTMIMEREIGRLHVELDEKDEQLKTSASTATKYLHELDGLRLQLAATQATADASAASAQSAQNQCLALLKELDEKNTSLKEHEDRVKRLGEQLDDLQKDLVARESSQKQLKDEVLRVEHEIMEALAKSGVSKDCELRKILDEVSPKNVVKINRLLIAKDEEIARLRNEIKTMTAHWKLKTKELESQLEKQRRADQELKKRVLKLEFCLQEARTQTRKLQRIGERREKAIKELRDQLAGKQGGASSTTESEKLKFWETSGFKVMASMSMLILVVFSKR
BLAST of Carg16447 vs. NCBI nr
Match: XP_022937847.1 (nuclear envelope-associated protein 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 546.2 bits (1406), Expect = 7.7e-152 Identity = 321/334 (96.11%), Postives = 321/334 (96.11%), Query Frame = 0
BLAST of Carg16447 vs. NCBI nr
Match: XP_023538312.1 (nuclear envelope-associated protein 2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143 Identity = 322/334 (96.41%), Postives = 322/334 (96.41%), Query Frame = 0
BLAST of Carg16447 vs. NCBI nr
Match: XP_022969672.1 (nuclear envelope-associated protein 2-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 477.6 bits (1228), Expect = 3.4e-131 Identity = 302/334 (90.42%), Postives = 303/334 (90.72%), Query Frame = 0
BLAST of Carg16447 vs. NCBI nr
Match: XP_011648883.1 (PREDICTED: myosin heavy chain, skeletal muscle-like [Cucumis sativus] >KGN61026.1 hypothetical protein Csa_2G034790 [Cucumis sativus]) HSP 1 Score: 469.9 bits (1208), Expect = 7.0e-129 Identity = 282/333 (84.68%), Postives = 305/333 (91.59%), Query Frame = 0
BLAST of Carg16447 vs. NCBI nr
Match: XP_008453180.1 (PREDICTED: myosin-2 heavy chain, non muscle-like [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 1.1e-124 Identity = 281/333 (84.38%), Postives = 302/333 (90.69%), Query Frame = 0
BLAST of Carg16447 vs. TAIR10
Match: AT5G26770.2 (unknown protein) HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68 Identity = 188/329 (57.14%), Postives = 227/329 (69.00%), Query Frame = 0
BLAST of Carg16447 vs. TAIR10
Match: AT1G09470.1 (unknown protein) HSP 1 Score: 236.1 bits (601), Expect = 3.1e-62 Identity = 155/334 (46.41%), Postives = 202/334 (60.48%), Query Frame = 0
BLAST of Carg16447 vs. TAIR10
Match: AT3G05830.2 (Encodes alpha-helical IF (intermediate filament)-like protein.) HSP 1 Score: 211.8 bits (538), Expect = 6.3e-55 Identity = 174/343 (50.73%), Postives = 216/343 (62.97%), Query Frame = 0
BLAST of Carg16447 vs. TAIR10
Match: AT1G09483.1 (unknown protein) HSP 1 Score: 89.0 bits (219), Expect = 6.1e-18 Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of Carg16447 vs. Swiss-Prot
Match: sp|F4K1B4|NEAP2_ARATH (Nuclear envelope-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=NEAP2 PE=1 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 3.1e-67 Identity = 188/329 (57.14%), Postives = 227/329 (69.00%), Query Frame = 0
BLAST of Carg16447 vs. Swiss-Prot
Match: sp|Q4PT37|NEAP3_ARATH (Nuclear envelope-associated protein 3 OS=Arabidopsis thaliana OX=3702 GN=NEAP3 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 5.6e-61 Identity = 155/334 (46.41%), Postives = 202/334 (60.48%), Query Frame = 0
BLAST of Carg16447 vs. Swiss-Prot
Match: sp|Q9M9L3|NEAP1_ARATH (Nuclear envelope-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=NEAP1 PE=1 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42 Identity = 155/330 (46.97%), Postives = 195/330 (59.09%), Query Frame = 0
BLAST of Carg16447 vs. Swiss-Prot
Match: sp|F4I0Z6|NEAP4_ARATH (Putative nuclear envelope-associated protein 4 OS=Arabidopsis thaliana OX=3702 GN=NEAP4 PE=5 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24 Identity = 65/107 (60.75%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg16447 vs. TrEMBL
Match: tr|A0A0A0LM53|A0A0A0LM53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034790 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 4.7e-129 Identity = 282/333 (84.68%), Postives = 305/333 (91.59%), Query Frame = 0
BLAST of Carg16447 vs. TrEMBL
Match: tr|A0A1S3BVL8|A0A1S3BVL8_CUCME (myosin-2 heavy chain, non muscle-like OS=Cucumis melo OX=3656 GN=LOC103493971 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 7.0e-125 Identity = 281/333 (84.38%), Postives = 302/333 (90.69%), Query Frame = 0
BLAST of Carg16447 vs. TrEMBL
Match: tr|A0A059AXG3|A0A059AXG3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H01317 PE=4 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 5.0e-107 Identity = 223/334 (66.77%), Postives = 261/334 (78.14%), Query Frame = 0
BLAST of Carg16447 vs. TrEMBL
Match: tr|A0A0L9TXW5|A0A0L9TXW5_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g157800 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 6.8e-104 Identity = 222/330 (67.27%), Postives = 262/330 (79.39%), Query Frame = 0
BLAST of Carg16447 vs. TrEMBL
Match: tr|A0A0S3SQM2|A0A0S3SQM2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G182800 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 6.8e-104 Identity = 222/330 (67.27%), Postives = 262/330 (79.39%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|