Carg23286 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23286
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	26S protease regulatory subunit 6A homolog
Location	Cucurbita_argyrosperma_scaffold_231 : 186048 .. 196054 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCCTTTTTCTTTCCCTTCACTTCTTCTTCTTCTTCTCCTCTCCGTTTCTGCTCGTCTCGTTTAATTTCCTTCAATTTCTGCAACTCAACTCAATCGAGTTTTATCCTCATGGCGACGGCTATGGTTGAAGATTCCAACTTCGAGGACGATCAGCTTGCTTCTATGACCACCGACGACATTGTTAGGGCTTCGCGTCTGCTCGACAATGAGATCCGAATTCTCAAGGTCTCTTAGTCTTCTTTACTCTTTCAATCATGTCTCTAATTCAATTCTGTATGTTCGTGTATGAAATCATCAACTTGCTTGCTTTTGGAGTTCTTTGTGGCTCGTTTTGTTCATTTTATGTCAGTTACTTTGAAAAACAAACTCTCTTTCTGTCTTTCTGATTTGTTCGTCAAATTTGCAATTAATAGAGGAGATTTATGATTTTTGGAGTGATTTTGGACGTGTAGGAAGAAGTGCAAAGAACAAATCTGGACTTGGAATCACTCAAGGAGAAGATAAAGGAGAATCAGGAGAAGATTAAACTCAATAAGCAGCTGCCTTACTTGGTCGGGAACATTGTCGAGGTATGCTGTTGACTTGTTGTGCTCTCAAGCTAATTCTTTTTCTCGCAGAATTATTTATATGTGTATTTTATATTTTCCTAGTAGCAAGTTCCAGGTCTAGTTTTTATGTGAGGGTCCGGGATAGTAGTTTTTGTGCTTGAAATGAAATCTTGCGAAGGCTGCTGAACTGTAGTGGTTTAAATATTTATATAAAATACAGAAACAGAAATGATTTATTCTGAATTATAACTTGTTTGTGAGCCCTAATTGGAATTGTTCCTGAGCTTGATATTCTATATCAACCCAAGGATATCCGTGGGTGAAAGTCATTCTTGAAGTGGATCTGTCGAAAGTACACTTTTTTTTTAGTTTTTTTTTCGTCTATTTCTGAGCCAAGTAGCTAGGGATTCTTATTAGGTAGATTCTGTGGTGAAGGTGATCTTTTGAAGCCCTTGTAAATAGGGTTTAGAGAGTTGTATAAAGACATTTTTATTAAAAGCAGTAGGTTCTCTTCCTTTCAATTTGCCATCCAATGGCGTGTTAATCATAGATCAACTATTGTGACTTTTTATTCTATACCCCCTTGGAGTTACAGTTGGTGTGTTCTTTTAATGCTTGGAACGCCAATTTCCTCTTGTTTTTGGTGGCGATCTAGGTTTATGTTGAGTATTTATCCATATTATTTGAACTCTGTTTCTGACCAATTGTCTTTTTTCAGATTTTGGAAATGAACCCAGAAGATGAAGCAGAGGAAGATGGTGCAAATATTGATCTTGATTCGCAAAGGAAAGGAAAATGTGTTGTCCTGAAGACCTCCACTCGTCAGGTTCGCTATGACCAATTTTTTTTTAATCATAATATCCTCCACTTCTGACTGTGAATGCCAGGATGCTACTAGAATTTCCTTAGTCAGTGTTGTGATCTTTCAATAATAGAAGTTGGTGTGGTCTTTCGTAAGTTGAAATTATAGCAATTTCTAACTGATTTTTTTGGTTGACTGGAGCTGTAATGGTGGATACTAGATATGTTAATTGCATGAACTAGGCATGGAAGATGAGTAACTTTACCAGGATTTCTTTAGTTTGATAGCTTAGAAATGTCATGTGATTAATGAAGGTCCCACTTTTTTATAGGCTAGAAATTGGCTAGACTTGTATTGAATTATTGTTTTGTTGTTTGCAGACTATCTTTTTACCTGTTGTCGGGCTTGTAGATCCTGATAAGCTAAAGCCAGGTGACTTGGTTGGTGTAAACAAGGATAGTTACCTGATTTTGGATACTCTGCCGTCTGAGTATGATTCTCGAGTGAAGGCTATGGAGGTTGATGAGAAGCCAACAGAAGACTACAATGACATTGGAGGGTTGGAAAAGCAGGTACTCTCAGACTCTTGACACTGTCCATACGTTCATTAGTTTACAGGTCATATTGGATATCATTTTAATTGATTGTTATATTATTGGCACAGATACAAGAACTCGTGGAGGCCATTGTCTTACCCATGACTCATAAAGAGCGATTTCAGAAACTTGGAATTCGTCCACCTAAAGGTGTGCTTTTGTATGGGCCTCCTGGAACTGGTAAAACTTTGATGGCACGTGCGTGTGCAGCACAAACGAATGCTACCTTTTTGAAGTTAGCTGGCCCACAACTTGTTCAGGTACAAATTTGATTGGGTAAAATAGTTATATAAGTACTGAACCTCAAAGACTTTGTGTCCTTCATTTTTGGGTTGTTTGCTAGTTTTCTGCACTGTACCGTGTTAATGAAGCTAAAAGTTTGTTTAAAAACTGAGCGCCCCCGTTCTTTTTAGGTTATTTTGATGTTCCTATGCTGTTGAATGGCTCCATGTGGTTCTTGTACTCTTTTGTCTTTCTTTCCTTATAGATTTGTCTATTAGCTATGTATAACTTGGAACTATTGCAGATGTTCATTGGGGATGGAGCAAAACTTGTTCGAGATGCTTTTCAGCTTGCAAAAGAAAAATCCCCATGCATCATTTTTATTGATGAAATTGATGCTATTGGAACAAAGAGATTTGACAGGTCTGTTGATGTTCCCCCCTCCCCTCCAATATTTTTCCAAAACTCTCTCATTTTGTTTAATTATTATTAGTTTTTGGCTGCAGTGAAGTAAGCGGAGACAGGGAGGTGCAGCGAACCATGTTAGAGCTACTCAATCAACTCGACGGGTTTAGCAGCGATGAACGCATCAAGGTTTCTTTTGTTCCTTTCTTGAATTATTTTGATGTCAGCCATTCATTGTCTCACCTCAGTGTAGGATGTGTTTATGTTGATTTTGTTTGCATTTGAATTTTACTTGAAAAATTTCTGGCTTTGGGGGTTTATTTGTATTTCATGATGCTTGATTGTCATTTTATTGAATTAGAATTCTTACTATTGCAGGTTATAGCAGCAACAAATCGTGCTGATATTCTTGATCCCGCGCTCATGCGTTCTGGTCGATTAGATCGAAAGATTGAATTCCCTCATCCTACTGAAGAAGCAAGGGCTCGAATCATGCAGGTTTTTATGTTAATTTTTTTTTATTGTGCTGCCTTTTTCCATGTAATATATATAAATTTTTTCATTTCATATTTTTAAACACAATTGTAGATCCACTCGAGGAAGATGAACGTCCACCCAGACGTTAACTTCGAAGAACTAGCTCGATCCACTGATGATTTCAATGGTGCACAACTAAAAGCAGTTTGTGTTGAGGCGGGCATGCTGGCTCTCCGCCGTGATGCTACTGAGGTGACCCTCTTTCATTCATACACGAACACACACACCGTTCATTTATCATGTTTTTAAGATATATGCTGCATGATATCTTCGAAGATACAATGATGAGAGGTCTCTATGGTAATCCCCAACGGTAAAATTTGAAATGGATGTTCTCGGGGAGGTTTTTCGAGGCCGGTTCAAGGTCTTCTTCAGGTCGAAAGCTTAATGAATGAAAACCTTGATATCTCTTGGAGGGCTAGTGTTAGGGCTCATGAATTCTCCCCATAGAACAGTGCAGTGGGGGGATCAATATGATGGATATATGTATATACACATACGTACATACGTACATACGTATAATCGTTCGAGCGAATTTCGTTCGAGCGAATTTGGGAGAGGGCATTATAGATCATATAAGTCTTAATGAAGTTCGTTATTTCAGCTTACAACACTAAAGAAAATAATCTGGAGTATATTTAAGCTTGAGATGTTAAGCCATGGGGCATGAGAGCCTTCCATGGCAAAGGAGAGAGAAGATTCAGTGTGTTAAAATGTGAGATCCTATGTCGGGAGGAGAACGAAATATTCTTTATAATGGTGTGGAAACCTCTCCCTAGCAGACGTATTTTAAAAACCTTGAGCGGAAGCTAGAAGGGAAAACCCCAAAGAGGACAATATCTTGTAGCGGTGGGTTTGAGCTGTTACATAAAATGTGTGGAATATTTAGCGTCGGGGAGGAGAACGAAATATTTTTTTATAATGGTGTGGAAACGTCTCCCTAATAGACGCGTTTTAAAAAACCTTGACGGAAAAAAAGTCCAAAAAAAACAATATCTGTTGGCTGTTGGCGGTGGGTTTGAGCTGTTACATAAAATGTGGAAGTATTTAGCCCCGGGTGAGTCTTAATAATGATTTTTTTTTTTTAATTTTTTTTTAGGTGAACCATGAGGACTTCAATGAAGGTATCATCCAGGTTCAAGCCAAGAAGAAAGCAAGCTTGAATTATTATGCATAGAGCTATCGACAAAGCCCGACCATCACGGAGATGGCAAATCAAGAGTTTAAGCAGGAAGGTCGTCGACAAAAACCCGACAGTAGAAGCTCAACTTTCGCACTCGTTCGTGTTCTTCGCCCTGAGGTATGTACTGGCCAGGGAGATCATGATGATGATGATGCTTCTCTAAAGATTGTTATTTCTTCCATTGGAAATTCCTGGGTTTTATATTATTATTAGTTTTCTATATGTTGTGAAAACTTAGAGCTTCATAACTCTTGCACCAAATGATAGAATGATGTTAATTGTTCTTTGTGTTGTAAGAAAAGCTTCTAAAGCTTACACGAGCGGCGTCGTTCTAGTCTATACTCCGAACACTATTTTTGAGAGTTTTATCACAAATTATAAAAAAAAAAAATGAAATTCTAAATTTTAGAATATATTAACTAAACTCGAACATATTTTTCAAACCGCATGAACGTAGAATTTCATGAAATGGGTTTGTTTTGTTTCTTCTACAACTTTCACCTCAACGCTCGGGTGTTAAAATGTTTATCAAGAGATTTAAACGCTTCCCAACTAATCCGTGTATATTAGAGTGTTAGTGTAAGCTCGGAAGCTAAAGTTAATAGGCTACTCTATCGTAAATGTGTTTGTGTTCTAAGATTTTGTTCAATTTTGATTTTCGTATTTTTAAATGTTCGGGTTCATCCAAATTTATTAAATACTAATAATAATTTTCATGCGAATATTTTTTCGAAGTTTATAAAGAAAAAATTAATTTGGATTTTTTTAAAAAAAATTTCAACAGGAAATTAACTTAATACTAATTTTAAGATTTATTAAAAATATAAAGAATAAAATTAGATATTTGAAAGTATATAAATTAAAATGGGAAGAAATTCAAAAGAATATAATACAAAATTAAACATATTTTTATTAAATTAGCCTATTTTAAAATTACCTTTAAACAAAGTCTCTTCACCGCCCGATTCTCCACGAGGGAAGTCTCTCTTTCACTTCTCTTCCTCTCTGTTTATTACGCCGCCTCCGCCGCCGTCCGGCCGGAATCTTCACGCTCTCTCTTCGCCATTGGTTGCTTTGAGTTCCATTACTTTGTTTCTCTTCGCCATCTCTTCTTGTTCCCTCGTAGATTAATCGGCGAACAAAACTCTCTCTCTCTGTCTCTCCCTCGCATTCTCCCCGTTTCAAGTGAAAAACAGCGGGCGACGGAATCCGTCTTGGACCGAGCAAGCTGATTCGAGTTGGAGTAATTGGAAATTTCAAAGAAGGTAAGGAAAATTTACGAGTCAATTTTTTGAATTAGAATGTTAAATTCTGTTGTTGTCAATTGATTTTACCGAAGAGTTCAATAGTTGCTGTACGGTGCAGATTTAGTTTTTGAAATATTTTCTATTATGATTCTTATGCTGTTTGATTAATCTTCGTCATCCCTCGCGCCCAATTTTGAAATTGTTGTATGATTTCATTAACTTCCAGATTGTTCATACGCCCAATTCTGAAATGCTCTAGCAATTACAAAACTAATTTATTGGATTTTCAGAAATGGAGTTGATCACGAATTTAATATCCCTTAACTTAGACTTTCGCTTATGGATTTAGTAGCGATTTAACACTTTTACCTTAATCATTTTGCAGAATTTGAATGGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGGTAACCTTAACATTTTCTTCATTAGTTTTATATGAAGATTCTACTGCCATTTTCTCAATAGCTTTTAAAGAATCTTCAGGAAAGGAAAATTTCAACTCTCTACTTATTGGTATATCAGCTGGCTTAGAAAATGTGATTTGTAATAAGCTTCTATCAATCAAGCACGGTTGAATTGGTCTAGTAGTCAATAATGGTCGTGTAAATAACGAAGGGCTCAAAGAAAATGAGTTCAAGCTATGGTGGTTACCTGCCTAAGATTTAATATCTTACAAGTTACCTTGACAACTGAACGAAATAGGGTTGTATGATGGTCCCGTGAGAATAGTTAAGGGGCCAGCAAGTTTTCCGGAACGCTCATCTAAATCAAAATAAGATAAAAAGGATAAGGAACCTCTCGTGCATGACTTAGATTTGTATGTCTTTTCTCTTATTTTGTTCCACTTGATTGGTGTAAATATTTGATATTGGTAGCGTTCAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCAGTTGCTTTCTGGTGTTCAGCAAGGACTTGGTGTGTGTTCTTTATCTGATATGATACTTGTCATCTGCTTCTACTGTTAGGATGAAGTGTTCTGTTTTGTAGTTATTGTTTTCGCCTTTGCAGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGGTGCATCACGACTCATGACGGTTTGCAAAGTTCAAAGAAGTGTATGTTTTTCTCCCAACTTTTGACAAGCAAGTTCGTCGACATTTTAATGCTCGTATTGGCATAATTGTTCCCTTTTGTTTTACGAACGAATGAAAGGGTAGTATCATTCTTTTTCTTCCAATTCCTCTCGTTTTTTCTATCTCACAATTTGGTTGTTTCTGTCAGATCCCACATCAGTTGGAGAGGGGAACGAAACATTCTTTAAAAAGTGCGGAAACTTCTCCCTAGAAGACGCGTTTTAAAGACCTTGAAGGGTAGCCTGAAAGGGAAAGCCCAAATAGGACAATATCTGCTGCTGGTGGGCTTGAGCCGTTACAAATGGTATCAGCAGACACTGGGTGATGTGCCAGCGACGAAGGGGGTGGATTGTAAGATCCCACATCCGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTAAGGGGAATCCCGAAAGGGAAAACCCCAAGAGGACAATATATGCTACTGGTGGGTTTGGGCCGTTATAGTTTCAATTTCAATAAGATATATTTCATACTTTTGTAACTAACCACTTGCTTAAACTGATATTGTTTCGTCTTTACATTTCTTTTGATCTTCATTTGTTATTTCCCTAATTTCGTCGATTCATTTCTCGTGAACATATGCAGTGCATACATGCCGGGTTGGACTGGATGATCATTTGAAAAAAGGTAGATAAAATGTTTCTATCAAGATTGAAGCTGTTTGCTATTTGTTGCATCCTGTAAGCATGTATGTTTTGTAATGTTTCTATCAAGATTGAAGCTGTTCGCTATGTTTTGTGAAAATTTTGTGTCCTTATGTCCTAAGGCACATTCTTCTGTTCTTTTTGTGGTTTATCATGTATGATAGTACTTAGAAGTACATTCTCTAACTTTGTTACTGATATTTAACTATTTCATGGAACAACAGTAAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGATGTAAGTATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATGTAGAATTGAATGATGAAGAAGCAACCATTCCTGATAAGGTAAACTGTGACTTCTATCTCTTAATAATAAATTGATTTTAGATTATTAACGACATATTTGAGAGTAATTGTGAGATCCCACGTTGGTTGGAGAGTAGAACGAAGCATTCTTTGTAAGGGTGTGGAAACCTTTCCTTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAAGGAAGGCCCAAGGAGGACAATATCTGCTAGCGGTGGGGTTGGACTGTTACAAATGGTATTAGAGCCAAACACAGGGCGGTGTGCGAACGAGGAAGTTGGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGTGGAACGAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCAGATGCGTTTTAAAAACCTTTGGGGAAGTTGGAAAAGGAAGGCCCAAAGAGGACAATATCTGCTAGCGGTGGATTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGGCGGTGTACCAGCGAGGATGTTGGGCTCTGAAAGGAGGTGGATTGTGAGATCCTACCTCGGTTGGAGAGGGGAACAAAACATTCTTTACAAGAGTGTGGAAATTTTGAGGGGAAATCTGAAAGGGAAGGCCCAAAGAGAACAATATCTGCTAGCAGTGGGCTTGGGCGGTTACAAATGGTATCAGAGTCAGACATCGGGCGGTGTGCCAACGAGGATACTGGGCCCTGAAGGGGGTGAATTGTGAGATCCCACCTCGGTTCAAGAGGGGAATGAAACCTTCTTTATAAGGGTGTGGAAATCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGGCTTAAAGAGGACAATATCTGTTAGCGGTAAGCTTGGACTATTACAGAATTGAAAAACAGAATCACTCTCAAGCACGTTCTTAGATGTTGAAAACGTCATTTCGGCATGCATTTTTCTGTCCTCTTTTTAATCAATTTCTGCTTTGTTCAGAAACCTGATGCTAACGAATATGCGTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGTAATGTTCTTCCTCCTCTGTTATTTTTCCAGGTGAACATGCAATGCTGTCTTTTTCTTTTCCGATAATCGTCGATCGAGGGCTCTACTTCTTGCATTATGATTACGTTCTCTCTTAATCTCGGGAGGTATCTCCGGAGAAACGCTACGTTCATTATCTAAACTGAAACTCATTGCAGGAGAAGATCATTTCTGGTCTAAGCCTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGACGACGAAATTATGAAACGAGCTTGGAAACTCATTCCGTGAGTGTTAATAACTTTAATTCTGAATGATTTGGTCTATAAGATGTTGCTAAGTTTTAGTAAATTCTTATGGATCAACAAAACTTTGAAGTTGATTATGTGCTGAACTTTTTATAGATTAAATTATTTTCTTTTCTTGTGATAGATGAATTGTGTTCGTTCATATTTTGCAATGAGAATAAACTGTGGGCCCCACTCGAACATCTCGTGTAATTTCATTCCCTTCAAAAGGTACTCGATCTCATTTCTGTTGATTATTAGTGAGTTTGATACCATCTTATTGATGTTACCTAAATATTGACCTCGGTCTCGATTCACATCTCTTAGCCTAGAGTACAACAAAAGTCATCCCAGACGTACTCGATGGACTCGTTAAGCTTGTTATGCCTGCCCTAAGATATGTTGCATGACTAGTATTAGAAGTGTTAGTTGGGTCTGATAAGCTGGTTATCACGTAGTTAAGCAACAAGAATTGTGAGAATCTCATATTGGTTGGGGAGTAGAACGAAACACCATTTATAAGGGTGTGGAAACCTTTCCCAGACGTGTTTTAAAAACCTTGAGGAGAAGACCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGTTGTTATATATGGTATCAGAGCCAGACACCGGATGATGTGCTAGCGAGGGGGCTGTTTGCCGAAGGGGGTTAGACACAAGGTGGTCTGCCAGGAGGCTGGGCACCAAAGGGGGTGGATTGTGAGAATCCCGCATTGGTTGGGGAGGAGAACGAAA

mRNA sequence

ATTTTCCTTTTTCTTTCCCTTCACTTCTTCTTCTTCTTCTCCTCTCCGTTTCTGCTCGTCTCGTTTAATTTCCTTCAATTTCTGCAACTCAACTCAATCGAGTTTTATCCTCATGGCGACGGCTATGGTTGAAGATTCCAACTTCGAGGACGATCAGCTTGCTTCTATGACCACCGACGACATTGTTAGGGCTTCGCGTCTGCTCGACAATGAGATCCGAATTCTCAAGGAAGAAGTGCAAAGAACAAATCTGGACTTGGAATCACTCAAGGAGAAGATAAAGGAGAATCAGGAGAAGATTAAACTCAATAAGCAGCTGCCTTACTTGGTCGGGAACATTGTCGAGATTTTGGAAATGAACCCAGAAGATGAAGCAGAGGAAGATGGTGCAAATATTGATCTTGATTCGCAAAGGAAAGGAAAATGTGTTGTCCTGAAGACCTCCACTCGTCAGACTATCTTTTTACCTGTTGTCGGGCTTGTAGATCCTGATAAGCTAAAGCCAGGTGACTTGGTTGGTGTAAACAAGGATAGTTACCTGATTTTGGATACTCTGCCGTCTGAGTATGATTCTCGAGTGAAGGCTATGGAGGTTGATGAGAAGCCAACAGAAGACTACAATGACATTGGAGGGTTGGAAAAGCAGATGTTCATTGGGGATGGAGCAAAACTTGTTCGAGATGCTTTTCAGCTTGCAAAAGAAAAATCCCCATGCATCATTTTTATTGATGAAATTGATGCTATTGGAACAAAGAGATTTGACAGTGAAGTAAGCGGAGACAGGGAGGTGCAGCGAACCATGTTAGAGCTACTCAATCAACTCGACGGGTTTAGCAGCGATGAACGCATCAAGGTTATAGCAGCAACAAATCGTGCTGATATTCTTGATCCCGCGCTCATGCGTTCTGGTCGATTAGATCGAAAGATTGAATTCCCTCATCCTACTGAAGAAGCAAGGGCTCGAATCATGCAGATCCACTCGAGGAAGATGAACGTCCACCCAGACGTTAACTTCGAAGAACTAGCTCGATCCACTGATGATTTCAATGGTGCACAACTAAAAGCAGTTTGTGTTGAGGCGGGCATGCTGGCTCTCCGCCGTGATGCTACTGAGAGCTATCGACAAAGCCCGACCATCACGGAGATGGCAAATCAAGAGTTTAAGCAGGAAGGTCGTCGACAAAAACCCGACAGTAGAAGCTCAACTTTCGCACTCGTTCGTGTTCTTCGCCCTGAGCCTATTTTAAAATTACCTTTAAACAAAGTCTCTTCACCGCCCGATTCTCCACGAGGGAAGTCTCTCTTTCACTTCTCTTCCTCTCTGTTTATTACGCCGCCTCCGCCGCCGTCCGGCCGGAATCTTCACGCTCTCTCTTCGCCATTGGTTGCTTTGACGGGCGACGGAATCCGTCTTGGACCGAGCAAGCTGATTCGAGTTGGAGTAATTGGAAATTTCAAAGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCAGTTGCTTTCTGGTGTTCAGCAAGGACTTGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGGTGCATCACGACTCATGACGTAAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGATGTAAGTATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATAAACCTGATGCTAACGAATATGCGTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGAGAAGATCATTTCTGGTCTAAGCCTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGACGACGAAATTATGAAACGAGCTTGGAAACTCATTCCATGAATTGTGTTCGTTCATATTTTGCAATGAGAATAAACTGTGGGCCCCACTCGAACATCTCGTGTAATTTCATTCCCTTCAAAAGGTACTCGATCTCATTTCTGTTGATTATTAGTGAGTTTGATACCATCTTATTGATGTTACCTAAATATTGACCTCGGTCTCGATTCACATCTCTTAGCCTAGAGTACAACAAAAGTCATCCCAGACGTACTCGATGGACTCGTTAAGCTTGTTATGCCTGCCCTAAGATATGTTGCATGACTAGTATTAGAAGTGTTAGTTGGGTCTGATAAGCTGGTTATCACGTAGTTAAGCAACAAGAATTGTGAGAATCTCATATTGGTTGGGGAGTAGAACGAAACACCATTTATAAGGGTGTGGAAACCTTTCCCAGACGTGTTTTAAAAACCTTGAGGAGAAGACCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGTTGTTATATATGGTATCAGAGCCAGACACCGGATGATGTGCTAGCGAGGAGGCTGGGCACCAAAGGGGGTGGATTGTGAGAATCCCGCATTGGTTGGGGAGGAGAACGAAA

Coding sequence (CDS)

ATGGCGACGGCTATGGTTGAAGATTCCAACTTCGAGGACGATCAGCTTGCTTCTATGACCACCGACGACATTGTTAGGGCTTCGCGTCTGCTCGACAATGAGATCCGAATTCTCAAGGAAGAAGTGCAAAGAACAAATCTGGACTTGGAATCACTCAAGGAGAAGATAAAGGAGAATCAGGAGAAGATTAAACTCAATAAGCAGCTGCCTTACTTGGTCGGGAACATTGTCGAGATTTTGGAAATGAACCCAGAAGATGAAGCAGAGGAAGATGGTGCAAATATTGATCTTGATTCGCAAAGGAAAGGAAAATGTGTTGTCCTGAAGACCTCCACTCGTCAGACTATCTTTTTACCTGTTGTCGGGCTTGTAGATCCTGATAAGCTAAAGCCAGGTGACTTGGTTGGTGTAAACAAGGATAGTTACCTGATTTTGGATACTCTGCCGTCTGAGTATGATTCTCGAGTGAAGGCTATGGAGGTTGATGAGAAGCCAACAGAAGACTACAATGACATTGGAGGGTTGGAAAAGCAGATGTTCATTGGGGATGGAGCAAAACTTGTTCGAGATGCTTTTCAGCTTGCAAAAGAAAAATCCCCATGCATCATTTTTATTGATGAAATTGATGCTATTGGAACAAAGAGATTTGACAGTGAAGTAAGCGGAGACAGGGAGGTGCAGCGAACCATGTTAGAGCTACTCAATCAACTCGACGGGTTTAGCAGCGATGAACGCATCAAGGTTATAGCAGCAACAAATCGTGCTGATATTCTTGATCCCGCGCTCATGCGTTCTGGTCGATTAGATCGAAAGATTGAATTCCCTCATCCTACTGAAGAAGCAAGGGCTCGAATCATGCAGATCCACTCGAGGAAGATGAACGTCCACCCAGACGTTAACTTCGAAGAACTAGCTCGATCCACTGATGATTTCAATGGTGCACAACTAAAAGCAGTTTGTGTTGAGGCGGGCATGCTGGCTCTCCGCCGTGATGCTACTGAGAGCTATCGACAAAGCCCGACCATCACGGAGATGGCAAATCAAGAGTTTAAGCAGGAAGGTCGTCGACAAAAACCCGACAGTAGAAGCTCAACTTTCGCACTCGTTCGTGTTCTTCGCCCTGAGCCTATTTTAAAATTACCTTTAAACAAAGTCTCTTCACCGCCCGATTCTCCACGAGGGAAGTCTCTCTTTCACTTCTCTTCCTCTCTGTTTATTACGCCGCCTCCGCCGCCGTCCGGCCGGAATCTTCACGCTCTCTCTTCGCCATTGGTTGCTTTGACGGGCGACGGAATCCGTCTTGGACCGAGCAAGCTGATTCGAGTTGGAGTAATTGGAAATTTCAAAGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCAGTTGCTTTCTGGTGTTCAGCAAGGACTTGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGGTGCATCACGACTCATGACGTAAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGATGTAAGTATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATAAACCTGATGCTAACGAATATGCGTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGAGAAGATCATTTCTGGTCTAAGCCTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGACGACGAAATTATGAAACGAGCTTGGAAACTCATTCCATGA

Protein sequence

MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATESYRQSPTITEMANQEFKQEGRRQKPDSRSSTFALVRVLRPEPILKLPLNKVSSPPDSPRGKSLFHFSSSLFITPPPPPSGRNLHALSSPLVALTGDGIRLGPSKLIRVGVIGNFKEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDVRSLTNELERLLDDVSIALEMENRLCASTVSDEDEDKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEIMKRAWKLIP

Homology

[Close]

BLAST of Carg23286 vs. NCBI nr
Match: XP_022937899.1 (26S proteasome regulatory subunit 6A homolog [Cucurbita moschata] >XP_023537770.1 26S proteasome regulatory subunit 6A homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 593.6 bits (1529), Expect = 8.1e-166
Identity = 334/398 (83.92%), Postives = 334/398 (83.92%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX
Sbjct: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
           XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. NCBI nr
Match: XP_022965741.1 (26S proteasome regulatory subunit 6A homolog [Cucurbita maxima])

HSP 1 Score: 592.0 bits (1525), Expect = 2.3e-165
Identity = 333/398 (83.67%), Postives = 334/398 (83.92%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX
Sbjct: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
           XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. NCBI nr
Match: XP_004144776.1 (PREDICTED: 26S protease regulatory subunit 6A homolog isoform X1 [Cucumis sativus] >KGN60962.1 hypothetical protein Csa_2G031700 [Cucumis sativus])

HSP 1 Score: 587.4 bits (1513), Expect = 5.8e-164
Identity = 318/398 (79.90%), Postives = 320/398 (80.40%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDSNFEDDQL SMTTDDIVRASRLLDNEIRILKEEVQRTNL+ ES+KE      
Sbjct: 1   MATAMVEDSNFEDDQLTSMTTDDIVRASRLLDNEIRILKEEVQRTNLESESIKEKIKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELGEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. NCBI nr
Match: XP_022156425.1 (26S proteasome regulatory subunit 6A homolog [Momordica charantia])

HSP 1 Score: 584.7 bits (1506), Expect = 3.7e-163
Identity = 328/398 (82.41%), Postives = 331/398 (83.17%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDSNFEDDQLASM TDDI+RASRLLDNEIRILKEEVQRTNL+L+S K XXXXXX
Sbjct: 1   MATAMVEDSNFEDDQLASMATDDIIRASRLLDNEIRILKEEVQRTNLELDSFKXXXXXXX 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
           XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. NCBI nr
Match: XP_012434686.1 (PREDICTED: 26S protease regulatory subunit 6A homolog [Gossypium raimondii] >XP_016718188.1 PREDICTED: 26S protease regulatory subunit 6A homolog [Gossypium hirsutum] >XP_016753567.1 PREDICTED: 26S protease regulatory subunit 6A homolog [Gossypium hirsutum] >XP_017631655.1 PREDICTED: 26S protease regulatory subunit 6A homolog [Gossypium arboreum] >KJB45969.1 hypothetical protein B456_007G341200 [Gossypium raimondii])

HSP 1 Score: 581.6 bits (1498), Expect = 3.2e-162
Identity = 314/398 (78.89%), Postives = 321/398 (80.65%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDS+FE+DQLASMTT+DIVRASRLLDNEIRILKEE+QRTNL+L+S KE      
Sbjct: 1   MATAMVEDSSFEEDQLASMTTEDIVRASRLLDNEIRILKEEMQRTNLELDSYKEKVKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. TAIR10
Match: AT3G05530.1 (regulatory particle triple-A ATPase 5A)

HSP 1 Score: 563.1 bits (1450), Expect = 2.1e-160
Identity = 305/399 (76.44%), Postives = 316/399 (79.20%), Query Frame = 0


Query: 1   MATAMVED-SNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXX 60
           MAT MVED S+FE+DQLASM+T+DI RA+RLLDNEIRILKE+ QRTNL+ +S KE     
Sbjct: 1   MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60

Query: 61  XXXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
                  KQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP
Sbjct: 61  QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120

Query: 121 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK-- 180
           VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK  
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240

Query: 241 --QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
             QMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300

Query: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNV 335
           QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNV
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360

[Close]

BLAST of Carg23286 vs. TAIR10
Match: AT1G09100.1 (26S proteasome AAA-ATPase subunit RPT5B)

HSP 1 Score: 559.3 bits (1440), Expect = 3.1e-159
Identity = 305/398 (76.63%), Postives = 313/398 (78.64%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAM ED++FE DQLASMTTDDI RASRLL NEIRILKEE QRTNLDLES+KE      
Sbjct: 1   MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAF LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR RI+QIHSRKMNV+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVN 360

[Close]

BLAST of Carg23286 vs. TAIR10
Match: AT1G53750.1 (regulatory particle triple-A 1A)

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-50
Identity = 112/277 (40.43%), Postives = 149/277 (53.79%), Query Frame = 0


Query: 120 VVGL---VDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 179
           VVGL   V P  ++ G  VGV+++ Y I   LP + D  V  M V+EKP   YND+GG +
Sbjct: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174

Query: 180 KQM--------------------------------------------------------- 239
           +Q+                                                         
Sbjct: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234

Query: 240 -------FIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 299
                  ++G+GA++VR+ FQ+A+ K  CI+F DE+DAIG  RFD  V GD EVQRTMLE
Sbjct: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294

Query: 300 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRK 330
           ++NQLDGF +   IKV+ ATNR D LDPAL+R GRLDRK+EF  P  E+R +I +IH+R 
Sbjct: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354

[Close]

BLAST of Carg23286 vs. TAIR10
Match: AT4G29040.1 (regulatory particle AAA-ATPase 2A)

HSP 1 Score: 196.4 bits (498), Expect = 5.2e-50
Identity = 93/152 (61.18%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 178 QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 237
           Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+   G+RE+QRTMLELLNQL
Sbjct: 260 QKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQL 319

Query: 238 DGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVHP 297
           DGF S   +KVI ATNR + LDPAL+R GR+DRKIEFP P  + R RI QIH+ KM +  
Sbjct: 320 DGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSE 379

Query: 298 DVNFEELARSTDDFNGAQLKAVCVEAGMLALR 330
           DVN EE   + D+F+GA +KA+C EAG+LALR
Sbjct: 380 DVNLEEFVMTKDEFSGADIKAICTEAGLLALR 411

[Close]

BLAST of Carg23286 vs. TAIR10
Match: AT2G20140.1 (AAA-type ATPase family protein)

HSP 1 Score: 196.1 bits (497), Expect = 6.8e-50
Identity = 93/152 (61.18%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 178 QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQL 237
           Q ++GDG KLVR+ F++A + SP I+FIDEIDA+GTKR+D+   G+RE+QRTMLELLNQL
Sbjct: 260 QKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQL 319

Query: 238 DGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVHP 297
           DGF S   +KVI ATNR + LDPAL+R GR+DRKIEFP P  + R RI QIH+ KM +  
Sbjct: 320 DGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAE 379

Query: 298 DVNFEELARSTDDFNGAQLKAVCVEAGMLALR 330
           DVN EE   + D+F+GA +KA+C EAG+LALR
Sbjct: 380 DVNLEEFVMTKDEFSGADIKAICTEAGLLALR 411

[Close]

BLAST of Carg23286 vs. Swiss-Prot
Match: sp|O23894|PRS6A_BRACM (26S proteasome regulatory subunit 6A homolog OS=Brassica campestris OX=3711 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.8e-159
Identity = 305/399 (76.44%), Postives = 317/399 (79.45%), Query Frame = 0


Query: 1   MATAMVED-SNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXX 60
           MAT MVED S+FE+DQLASM+T+DIVRA+RLL+NEIRILKE+ QRTNL+ +S KE     
Sbjct: 1   MATPMVEDTSSFEEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKEN 60

Query: 61  XXXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
                  KQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP
Sbjct: 61  QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120

Query: 121 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK-- 180
           VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK  
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240

Query: 241 --QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
             QMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300

Query: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNV 335
           QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNV
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360

[Close]

BLAST of Carg23286 vs. Swiss-Prot
Match: sp|Q9SEI2|PS6AA_ARATH (26S proteasome regulatory subunit 6A homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT5A PE=1 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 3.8e-159
Identity = 305/399 (76.44%), Postives = 316/399 (79.20%), Query Frame = 0


Query: 1   MATAMVED-SNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXX 60
           MAT MVED S+FE+DQLASM+T+DI RA+RLLDNEIRILKE+ QRTNL+ +S KE     
Sbjct: 1   MATPMVEDTSSFEEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKEN 60

Query: 61  XXXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120
                  KQLPYLVGNIVEILEMNPED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP
Sbjct: 61  QEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLP 120

Query: 121 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK-- 180
           VVGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK  
Sbjct: 121 VVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQI 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 QELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ 240

Query: 241 --QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300
             QMFIGDGAKLVRDAFQLAKEK+PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN
Sbjct: 241 LVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLN 300

Query: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNV 335
           QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNV
Sbjct: 301 QLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNV 360

[Close]

BLAST of Carg23286 vs. Swiss-Prot
Match: sp|O04019|PS6AB_ARATH (26S proteasome regulatory subunit 6A homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT5B PE=1 SV=3)

HSP 1 Score: 559.3 bits (1440), Expect = 5.5e-158
Identity = 305/398 (76.63%), Postives = 313/398 (78.64%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAM ED++FE DQLASMTTDDI RASRLL NEIRILKEE QRTNLDLES+KE      
Sbjct: 1   MATAMAEDTSFEGDQLASMTTDDIGRASRLLANEIRILKEESQRTNLDLESVKEKIKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEM+PED+AEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAF LAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR RI+QIHSRKMNV+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVN 360

[Close]

BLAST of Carg23286 vs. Swiss-Prot
Match: sp|P54776|PRS6A_SOLLC (26S proteasome regulatory subunit 6A homolog OS=Solanum lycopersicum OX=4081 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 8.0e-157
Identity = 312/398 (78.39%), Postives = 323/398 (81.16%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MAT M EDSNFEDDQL +M+T+DI+RASRLLDNEIRI+KEE+QRTNL       XXXXXX
Sbjct: 1   MATPMAEDSNFEDDQLHAMSTEDIIRASRLLDNEIRIIKEELQRTNLXXXXXXXXXXXXX 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
           XXXXXXKQLPYLVGNIVEILEMNPE+EAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  XXXXXXKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPD LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY+DIGGLEK   
Sbjct: 121 VGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNV+
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVN 360

[Close]

BLAST of Carg23286 vs. Swiss-Prot
Match: sp|P46465|PRS6A_ORYSJ (26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TBP1 PE=2 SV=2)

HSP 1 Score: 499.2 bits (1284), Expect = 6.8e-140
Identity = 286/382 (74.87%), Postives = 294/382 (76.96%), Query Frame = 0


Query: 17  ASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXXXXXXXXKQLPYLVGNI 76
           ASM+T+DIVRA+RLLD                      XXXXXXXXXXXX  LPYLVGNI
Sbjct: 23  ASMSTEDIVRATRLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPYLVGNI 82

Query: 77  VEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDKLKPGDLVG 136
           VEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV+GLVDP+KLKPGDLVG
Sbjct: 83  VEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVIGLVDPEKLKPGDLVG 142

Query: 137 VNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK------------------- 196
           VNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK                   
Sbjct: 143 VNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKDRF 202

Query: 197 ---------------------------------------------QMFIGDGAKLVRDAF 256
                                                        QMFIGDGAKLVRDAF
Sbjct: 203 QKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAF 262

Query: 257 QLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAAT 316
           QLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAAT
Sbjct: 263 QLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAAT 322

Query: 317 NRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVHPDVNFEELARSTDDFN 335
           NRADILDPALMRSGRLDRKIEFPHP+EEARARI+QIHSRKMNV+PDVNFEELARSTDDFN
Sbjct: 323 NRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFN 382

[Close]

BLAST of Carg23286 vs. TrEMBL
Match: tr|A0A0A0LJT3|A0A0A0LJT3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031700 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 3.8e-164
Identity = 318/398 (79.90%), Postives = 320/398 (80.40%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDSNFEDDQL SMTTDDIVRASRLLDNEIRILKEEVQRTNL+ ES+KE      
Sbjct: 1   MATAMVEDSNFEDDQLTSMTTDDIVRASRLLDNEIRILKEEVQRTNLESESIKEKIKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELGEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. TrEMBL
Match: tr|A0A1U8LXQ3|A0A1U8LXQ3_GOSHI (26S protease regulatory subunit 6A homolog OS=Gossypium hirsutum OX=3635 GN=LOC107930935 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.1e-162
Identity = 314/398 (78.89%), Postives = 321/398 (80.65%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDS+FE+DQLASMTT+DIVRASRLLDNEIRILKEE+QRTNL+L+S KE      
Sbjct: 1   MATAMVEDSSFEEDQLASMTTEDIVRASRLLDNEIRILKEEMQRTNLELDSYKEKVKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. TrEMBL
Match: tr|A0A0D2SP91|A0A0D2SP91_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G341200 PE=3 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 2.1e-162
Identity = 314/398 (78.89%), Postives = 321/398 (80.65%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MATAMVEDS+FE+DQLASMTT+DIVRASRLLDNEIRILKEE+QRTNL+L+S KE      
Sbjct: 1   MATAMVEDSSFEEDQLASMTTEDIVRASRLLDNEIRILKEEMQRTNLELDSYKEKVKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNVH
Sbjct: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. TrEMBL
Match: tr|G7I8P7|G7I8P7_MEDTR (26S proteasome regulatory particle triple-A ATPase protein OS=Medicago truncatula OX=3880 GN=11446055 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 6.1e-162
Identity = 313/398 (78.64%), Postives = 320/398 (80.40%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MA+AMVED+NFEDDQLA+M+TDDIVRASRLLDNEIRILKEE QRTNL+LES KE      
Sbjct: 1   MASAMVEDANFEDDQLANMSTDDIVRASRLLDNEIRILKEESQRTNLELESYKEKIKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSD+RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNVH
Sbjct: 301 LDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360

[Close]

BLAST of Carg23286 vs. TrEMBL
Match: tr|B7FKW8|B7FKW8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 4.0e-161
Identity = 311/398 (78.14%), Postives = 319/398 (80.15%), Query Frame = 0


Query: 1   MATAMVEDSNFEDDQLASMTTDDIVRASRLLDNEIRILKEEVQRTNLDLESLKEXXXXXX 60
           MA+AMVED+NFEDDQLA+M+TDDIVRASRLLDNEIRILKEE QRTNL+LES KE      
Sbjct: 1   MASAMVEDANFEDDQLANMSTDDIVRASRLLDNEIRILKEESQRTNLELESYKEKIKENQ 60

Query: 61  XXXXXXKQLPYLVGNIVEILEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120
                 KQLPYLVGNIVEI+EMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV
Sbjct: 61  EKIKLNKQLPYLVGNIVEIMEMNPEDEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPV 120

Query: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK--- 180
           VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEK   
Sbjct: 121 VGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ELVEAIVLPMTHKERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQL 240

Query: 241 -QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300
            QMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ
Sbjct: 241 VQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQ 300

Query: 301 LDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARIMQIHSRKMNVH 335
           LDGFSSD+RIKV AATNRADILDPALMRSGRLDRKIEFPHPTEEARARI+QIHSRKMNVH
Sbjct: 301 LDGFSSDDRIKVTAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVH 360

The following BLAST results are available for this feature:

BLAST of Carg23286 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937899.1	8.1e-166	83.92	26S proteasome regulatory subunit 6A homolog [Cucurbita moschata] >XP_023537770....	[more]
XP_022965741.1	2.3e-165	83.67	26S proteasome regulatory subunit 6A homolog [Cucurbita maxima]	[more]
XP_004144776.1	5.8e-164	79.90	PREDICTED: 26S protease regulatory subunit 6A homolog isoform X1 [Cucumis sativu...	[more]
XP_022156425.1	3.7e-163	82.41	26S proteasome regulatory subunit 6A homolog [Momordica charantia]	[more]
XP_012434686.1	3.2e-162	78.89	PREDICTED: 26S protease regulatory subunit 6A homolog [Gossypium raimondii] >XP_...	[more]

BLAST of Carg23286 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05530.1	2.1e-160	76.44	regulatory particle triple-A ATPase 5A	[more]
AT1G09100.1	3.1e-159	76.63	26S proteasome AAA-ATPase subunit RPT5B	[more]
AT1G53750.1	2.3e-50	40.43	regulatory particle triple-A 1A	[more]
AT4G29040.1	5.2e-50	61.18	regulatory particle AAA-ATPase 2A	[more]
AT2G20140.1	6.8e-50	61.18	AAA-type ATPase family protein	[more]

BLAST of Carg23286 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23894\|PRS6A_BRACM	3.8e-159	76.44	26S proteasome regulatory subunit 6A homolog OS=Brassica campestris OX=3711 GN=T...	[more]
sp\|Q9SEI2\|PS6AA_ARATH	3.8e-159	76.44	26S proteasome regulatory subunit 6A homolog A OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|O04019\|PS6AB_ARATH	5.5e-158	76.63	26S proteasome regulatory subunit 6A homolog B OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|P54776\|PRS6A_SOLLC	8.0e-157	78.39	26S proteasome regulatory subunit 6A homolog OS=Solanum lycopersicum OX=4081 GN=...	[more]
sp\|P46465\|PRS6A_ORYSJ	6.8e-140	74.87	26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Carg23286 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJT3\|A0A0A0LJT3_CUCSA	3.8e-164	79.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031700 PE=3 SV=1	[more]
tr\|A0A1U8LXQ3\|A0A1U8LXQ3_GOSHI	2.1e-162	78.89	26S protease regulatory subunit 6A homolog OS=Gossypium hirsutum OX=3635 GN=LOC1...	[more]
tr\|A0A0D2SP91\|A0A0D2SP91_GOSRA	2.1e-162	78.89	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G341200 PE=3 ...	[more]
tr\|G7I8P7\|G7I8P7_MEDTR	6.1e-162	78.64	26S proteasome regulatory particle triple-A ATPase protein OS=Medicago truncatul...	[more]
tr\|B7FKW8\|B7FKW8_MEDTR	4.0e-161	78.14	Uncharacterized protein OS=Medicago truncatula OX=3880 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0036402	proteasome-activating ATPase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003960	ATPase_AAA_CS
IPR035254	PSMC3
IPR003959	ATPase_AAA_core
IPR003593	AAA+_ATPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0036402	proteasome-activating ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23286-RA	Carg23286-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 35..69
None	No IPR available	COILS	Coil	Coil	coord: 535..555
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 36..163 e-value: 2.2E-20 score: 74.5
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 172..276 e-value: 2.1E-31 score: 111.1
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 277..352 e-value: 1.6E-19 score: 71.4
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 178..335
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 8..179
None	No IPR available	CDD	cd00009	AAA	coord: 183..275 e-value: 3.6443E-11 score: 60.6227
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 102..278 e-value: 2.3E-4 score: 30.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 178..275 e-value: 6.1E-26 score: 91.3
IPR035254	26S Proteasome regulatory subunit 6A	PANTHER	PTHR23073:SF7	26S PROTEASE REGULATORY SUBUNIT 6A	coord: 8..179
IPR035254	26S Proteasome regulatory subunit 6A	PANTHER	PTHR23073:SF7	26S PROTEASE REGULATORY SUBUNIT 6A	coord: 178..335
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 246..264
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 174..334

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23286	Cla019934	Watermelon (97103) v1	carwmB0885
Carg23286	Csa2G031700	Cucumber (Chinese Long) v2	carcuB0896
Carg23286	MELO3C004218	Melon (DHL92) v3.5.1	carmeB0870
Carg23286	ClCG02G015290	Watermelon (Charleston Gray)	carwcgB0858
Carg23286	CSPI02G04360	Wild cucumber (PI 183967)	carcpiB0916
Carg23286	Cucsa.091000	Cucumber (Gy14) v1	carcgyB1002
Carg23286	CmaCh05G011010	Cucurbita maxima (Rimu)	carcmaB1222
Carg23286	CmoCh12G010650	Cucurbita moschata (Rifu)	carcmoB1190
Carg23286	CmoCh05G011140	Cucurbita moschata (Rifu)	carcmoB1191
Carg23286	Lsi11G006030	Bottle gourd (USVL1VR-Ls)	carlsiB801
Carg23286	Cp4.1LG07g08780	Cucurbita pepo (Zucchini)	carcpeB1230
Carg23286	Cp4.1LG11g08980	Cucurbita pepo (Zucchini)	carcpeB1229
Carg23286	CsGy2G004500	Cucumber (Gy14) v2	carcgybB0868
Carg23286	MELO3C004218.2	Melon (DHL92) v3.6.1	carmedB0879
Carg23286	CsaV3_2G006720	Cucumber (Chinese Long) v3	carcucB0920
Carg23286	Cla97C02G041070	Watermelon (97103) v2	carwmbB0921

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23286	Wax gourd	carwgoB1029
Carg23286	Silver-seed gourd	carcarB522
Carg23286	Cucurbita maxima (Rimu)	carcmaB1221