Carg19213 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTACCTGAACAGAGTTGGAATGGCGGCGAGCGTGGCAGTGGCTCAAGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAAAATCCGGCAGATCTCCGGCCTCTTTCCAGTTTAGTCGGATCGGAAGGTCCCGGAGCTGTCCGGAGCTTAGACGCCGACGAGAGGATGGCACAAACGGAGGATTCTCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGATGA ATGAGTTACCTGAACAGAGTTGGAATGGCGGCGAGCGTGGCAGTGGCTCAAGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAAAATCCGGCAGATCTCCGGCCTCTTTCCAGTTTAGTCGGATCGGAAGGTCCCGGAGCTGTCCGGAGCTTAGACGCCGACGAGAGGATGGCACAAACGGAGGATTCTCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGATGA ATGAGTTACCTGAACAGAGTTGGAATGGCGGCGAGCGTGGCAGTGGCTCAAGGCCACACGGAGATCGGACACAAGTGGAAATCTGGACTCAAATCTCTTCGACAAGGTCGGAGACTTTTGTCTTCCGGTGAAAATCCGGCAGATCTCCGGCCTCTTTCCAGTTTAGTCGGATCGGAAGGTCCCGGAGCTGTCCGGAGCTTAGACGCCGACGAGAGGATGGCACAAACGGAGGATTCTCTCCGGCGAGTCATGTACTTGAACTGTTGGGGCCAGGGATGA MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEGPGAVRSLDADERMAQTEDSLRRVMYLNCWGQG
BLAST of Carg19213 vs. NCBI nr
Match: KGN43581.1 (hypothetical protein Csa_7G046690 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40 Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Carg19213 vs. NCBI nr
Match: PLY83836.1 (hypothetical protein LSAT_3X40041 [Lactuca sativa]) HSP 1 Score: 110.9 bits (276), Expect = 2.3e-21 Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Carg19213 vs. NCBI nr
Match: XP_020238544.1 (uncharacterized protein LOC109817636 [Cajanus cajan] >XP_020215110.1 uncharacterized protein LOC109799042 [Cajanus cajan] >KYP43466.1 hypothetical protein KK1_035112 [Cajanus cajan] >KYP68979.1 hypothetical protein KK1_022629 [Cajanus cajan]) HSP 1 Score: 110.5 bits (275), Expect = 3.0e-21 Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of Carg19213 vs. NCBI nr
Match: XP_017424955.1 (PREDICTED: uncharacterized protein LOC108333943 [Vigna angularis] >BAT92247.1 hypothetical protein VIGAN_07093200 [Vigna angularis var. angularis]) HSP 1 Score: 109.0 bits (271), Expect = 8.7e-21 Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of Carg19213 vs. NCBI nr
Match: XP_016169946.1 (uncharacterized protein LOC107612740 [Arachis ipaensis] >XP_025673461.1 uncharacterized protein LOC112772702 [Arachis hypogaea]) HSP 1 Score: 109.0 bits (271), Expect = 8.7e-21 Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Carg19213 vs. TAIR10
Match: AT4G28240.1 (Wound-responsive family protein) HSP 1 Score: 69.3 bits (168), Expect = 1.4e-12 Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 0
BLAST of Carg19213 vs. TrEMBL
Match: tr|A0A0A0K6Z3|A0A0A0K6Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.2e-40 Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Carg19213 vs. TrEMBL
Match: tr|A0A2N9HZV9|A0A2N9HZV9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23 Identity = 56/92 (60.87%), Postives = 71/92 (77.17%), Query Frame = 0
BLAST of Carg19213 vs. TrEMBL
Match: tr|A0A2J6L919|A0A2J6L919_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X40041 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-21 Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Carg19213 vs. TrEMBL
Match: tr|A0A151RLL3|A0A151RLL3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_022629 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.0e-21 Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of Carg19213 vs. TrEMBL
Match: tr|A0A0S3SHH3|A0A0S3SHH3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G093200 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 5.8e-21 Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |