Carg27908 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAAAAATCGCTTTCCTTCCCCTTCCTCCCCTCCCCTTCTTCCCTTTCCCTTGGTGACGTTTTGTCAAACCAGAAATTAATTAAAAAAGAAGGCCCATGGGGTCCTTGACGTTTTGTGGGATGTGGTCGAAATTTTGCAGAGGACCCATTTGCAGAGGAGGATCAAAACAAATTTGTTGAACTCATCACACGCTTCCCCCTTCTGGGTTTGATCCTTTTCCCTTCACTTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCTTTTATGACCAACAACTGCTTTTGAATCAATTTATCCCCCCCCTTTCAGCCTGGAATTGAGTGGAATTCAAGTATCCTTTCTCTTACGCTTTCATTTCACTTTTCTATTCCCTTTTGTTTTCTGCTTTTCCTCTGCTGAATTCTTCTTTTGACTTTGCTTGTCCAGGAAAGTTTCAACTATGTTCAGGGGGAAAGTTGGGGTATGGATATGCTGAGGAGAATATTTTTTGTCATTTTTTCTCTCTTTTGGTGATTATGCATTGGTGGGTTCCCAACTTCTATCTGATCTAACATTTTTCCGATCCAACAGTCTCTGCTCCTTCTTTCCCTTTTTCAGGTGGAATGGAATGGAATGGAATTGATTTCTCTTTTCCCTCATATTGTTCTTCCTTCATTTCCCTCTTGTCTTTCCTGTCAATACTCGTGTTTTGATCCAAATTTTAGTTGTTTTTCCAACGCTTTGCCTTTTTCTTTCCATTATTGGCTGTTGGTCATGTGAATTTCAGATGGGTTTATCAAGATTCTATTGGTTTTATCTTGTACTACCTTCAAGAAGAATTGACTTGCTTCCTGTATCTGCAATTTTGGAAGTTTCTTGATTTAATCATTTTAGAATCTTCTGTTGATTCGGAAGATCTGTTCTTTATCTGTTCTGGGTTTAGAGTGTAATAGCAGTGAAAATGTGAGATCCCACGTCCATTAGGAAGGAGAACGAAACACCCTTTATAAGGGCGTGGAAACCTCTCCCTATCGAACTTGTTTTAAAAACTTCGAGGGGAAGCTCAAAAAGGATAATATCTGCTAGCGGTGGGCTTGGGCTGTTATAGAAAATTTCCATTGAAGATTTACTTCTCCTGCAAATGTGGTATTAGCTTTGGTTCGTATTAGGGAACTTTGGGACAGAAATTGTTGATTTCTCTGCTGTATGGATTCAGTTGCTACCAGTTTCTTATTGGTGTGTTGCTTGCTGCAAGCTTATGTGTTTCAACTTTTAAACGCGTAGAGATTGACGTAAAGAGCTATTGAAAAGAATTTATGTAACGTTTATACGTTTTCAGAATTTCGAGTGGATGATTTCTAGTTCCTGACTGAATAACTTGGTGCAGGAAAAAGTATAGTAGCTAAACAATCCAATAGTGAAGTTTCTAGTATGGGTTGGTGGACTAAGCTTTTCAAAGGCCACAAAAGCTCATACAGGGAAAGATATGGAGACGATAGAATTTGGGATGAACCTCGAACCTCGGTGGTAGGAATCTAGTTTTTCATCTCTTCATCTTTATTCCGCTGTTTCTGCAGATCTGTCATAGGTGGATAGTATACACTACAGAGTAAAATACTTCTCGATACTCGGTGCTGATTTGTGTTCGTGGAAAACTTGACAGGATGAATTGACAGAACATGAACGAGAGGAGATTGATTATGCAATTGCACTATCACTTTTGGAAGAAGATCATAAAGGGAAAGCGTTGACAGGTGAATTTGGTTGCACTCATTTTGCATTCTATGATTTATTGACTTGTCTTTCGGGGAGTTCTGAGGACGCATTAAGCGTGTTCGTCGCTTGGTGTGTGACTGGGGCAGCACGAAGATAATATATCATAAAATGATGCATGACACTTCAGAAATTAACAACAATGATACAATTACAAGCTTGCCACATTATATCAAGGGTTCATTCATATTGTTTTTTTTTTTTTTTTTTGTTATTTGTCAATTGCAGAAGAAGAAGCTCACAGTGATGAAGATGAACACAGTACCAAAGCTGAATCAGAGGATGATGAACAAAGTACGAAAGGCGAGTCAGACGATGACGATCAAATTACTAAGTCTCAATTGGAGGAGGACGAGCGACTTGCTAAAGCTCAAATGGAGGAAGATGATCGACTTGCCAAAGCTCAAATGGAAGAAGACGAGCGACTTGCTAAAGCTCAAATGGAGGAAGATGAGAGAGCTGCCAAAGCTCAATTGGAGGAAGACGAGCAGGTTGCTAGCACTCTAGTGGAGGATGATGAGAAGGTTTCCACATATCAAGCTGAAGAAGATGAACAGTTAGCTAGAGCTCTCCAAGAAAGTCTAAATATGGAGCCACCACCTCCTAGATTTGATAGTGGAAATATTTTCAATCATTATCCTTTCTTCTATCCATCAGGATACAGGTACATATGGCCAATCATGCATATTCCTTTGCCTCAAGACACTACTTTAGCCATGTTTAGTCTGCTTTGATCGTGAACTCGTATCTCGTTGGTCTGGTCTTATGGGAACGATGTCTGAAATCTAGCTTAGTAACTTTTCATTTGGTCTGGTCTAAACTCGTATTTCATGTAGGGTCTGTGCTGGTTGCCATACTGAGATTGGTCACGGGCGGTTTCTAAGTTGCATGGGAGCTGTTTGGCATCCAGAATGTTTTCGCTGCAATACTTGCAATGAACCCATAACTGATCATGAGGTGGATATACAATTGAAGTTTCCTTTCGAACATGTGGGTATTGATTTCTCGTTAAAATGAATCTAAATTTTGACAGTTCTCGATGTCCGGGAACCGACCTTATCACAAATCCTGCTTTAAGGAACAACATCATCCAAGATGTGACGTTTGCAGCAACTTTGTAAGCCTCTCTTCTTCTGTTTGATGGATTCATTCATTGTTTCGATTTATTCCTCTAAAGAACGTCTTGTCGTTTGAGAATGATATATGAATATCTTGTCGTTTCTTTCACATCTGTCGATTATTCAACTTTATAACCTCGAAATATATTGATCCTGATCTTTTCCTTAATTTCCTTCTGCACAGATTCCTACTAATTCTTCTGGTCTTATAGAGTATAGAAAACATCCTTTCTGGTCACAACAATATTGTCCTTCACACGAAAAAGATGGAACTCCGAGATGTTGTAGCTGCGAAAGAATGGAGGTGATCTTCAAAATTATATTCTACCCCGACCCCTTTTATCGATCACACGTGTATAGTATGAAGAAACAAGATCTGGAGAAAACGGCTCTCTTCATCTCAGTTTTAACTTTTGAATTGATGCAGCCAAGGGACACTAGCTACTTGTTACTTGATGATGGTCGGAAGCTCTGTTTAGAGTGTTTGGACTCTGCAATCATGGATACTCATTGTCATCCTCGTCAAGAACTCATTTGA TCAAAAATCGCTTTCCTTCCCCTTCCTCCCCTCCCCTTCTTCCCTTTCCCTTGGTGACGTTTTGTCAAACCAGAAATTAATTAAAAAAGAAGGCCCATGGGGTCCTTGACGTTTTGTGGGATGTGGTCGAAATTTTGCAGAGGACCCATTTGCAGAGGAGGATCAAAACAAATTTGTTGAACTCATCACACGCTTCCCCCTTCTGGGAAAAAGTATAGTAGCTAAACAATCCAATAGTGAAGTTTCTAGTATGGGTTGGTGGACTAAGCTTTTCAAAGGCCACAAAAGCTCATACAGGGAAAGATATGGAGACGATAGAATTTGGGATGAACCTCGAACCTCGGTGGATGAATTGACAGAACATGAACGAGAGGAGATTGATTATGCAATTGCACTATCACTTTTGGAAGAAGATCATAAAGGGAAAGCGTTGACAGAAGAAGAAGCTCACAGTGATGAAGATGAACACAGTACCAAAGCTGAATCAGAGGATGATGAACAAAGTACGAAAGGCGAGTCAGACGATGACGATCAAATTACTAAGTCTCAATTGGAGGAGGACGAGCGACTTGCTAAAGCTCAAATGGAGGAAGATGATCGACTTGCCAAAGCTCAAATGGAAGAAGACGAGCGACTTGCTAAAGCTCAAATGGAGGAAGATGAGAGAGCTGCCAAAGCTCAATTGGAGGAAGACGAGCAGGTTGCTAGCACTCTAGTGGAGGATGATGAGAAGGTTTCCACATATCAAGCTGAAGAAGATGAACAGTTAGCTAGAGCTCTCCAAGAAAGTCTAAATATGGAGCCACCACCTCCTAGATTTGATAGTGGAAATATTTTCAATCATTATCCTTTCTTCTATCCATCAGGATACAGGGTCTGTGCTGGTTGCCATACTGAGATTGGTCACGGGCGGTTTCTAAGTTGCATGGGAGCTGTTTGGCATCCAGAATGTTTTCGCTGCAATACTTGCAATGAACCCATAACTGATCATGAGTTCTCGATGTCCGGGAACCGACCTTATCACAAATCCTGCTTTAAGGAACAACATCATCCAAGATGTGACGTTTGCAGCAACTTTAAACAAGATCTGGAGAAAACGGCTCTCTTCATCTCAGTTTTAACTTTTGAATTGATGCAGCCAAGGGACACTAGCTACTTGTTACTTGATGATGGTCGGAAGCTCTGTTTAGAGTGTTTGGACTCTGCAATCATGGATACTCATTGTCATCCTCGTCAAGAACTCATTTGA ATGGGTTGGTGGACTAAGCTTTTCAAAGGCCACAAAAGCTCATACAGGGAAAGATATGGAGACGATAGAATTTGGGATGAACCTCGAACCTCGGTGGATGAATTGACAGAACATGAACGAGAGGAGATTGATTATGCAATTGCACTATCACTTTTGGAAGAAGATCATAAAGGGAAAGCGTTGACAGAAGAAGAAGCTCACAGTGATGAAGATGAACACAGTACCAAAGCTGAATCAGAGGATGATGAACAAAGTACGAAAGGCGAGTCAGACGATGACGATCAAATTACTAAGTCTCAATTGGAGGAGGACGAGCGACTTGCTAAAGCTCAAATGGAGGAAGATGATCGACTTGCCAAAGCTCAAATGGAAGAAGACGAGCGACTTGCTAAAGCTCAAATGGAGGAAGATGAGAGAGCTGCCAAAGCTCAATTGGAGGAAGACGAGCAGGTTGCTAGCACTCTAGTGGAGGATGATGAGAAGGTTTCCACATATCAAGCTGAAGAAGATGAACAGTTAGCTAGAGCTCTCCAAGAAAGTCTAAATATGGAGCCACCACCTCCTAGATTTGATAGTGGAAATATTTTCAATCATTATCCTTTCTTCTATCCATCAGGATACAGGGTCTGTGCTGGTTGCCATACTGAGATTGGTCACGGGCGGTTTCTAAGTTGCATGGGAGCTGTTTGGCATCCAGAATGTTTTCGCTGCAATACTTGCAATGAACCCATAACTGATCATGAGTTCTCGATGTCCGGGAACCGACCTTATCACAAATCCTGCTTTAAGGAACAACATCATCCAAGATGTGACGTTTGCAGCAACTTTAAACAAGATCTGGAGAAAACGGCTCTCTTCATCTCAGTTTTAACTTTTGAATTGATGCAGCCAAGGGACACTAGCTACTTGTTACTTGATGATGGTCGGAAGCTCTGTTTAGAGTGTTTGGACTCTGCAATCATGGATACTCATTGTCATCCTCGTCAAGAACTCATTTGA MGWWTKLFKGHKSSYRERYGDDRIWDEPRTSVDELTEHEREEIDYAIALSLLEEDHKGKALTEEEAHSDEDEHSTKAESEDDEQSTKGESDDDDQITKSQLEEDERLAKAQMEEDDRLAKAQMEEDERLAKAQMEEDERAAKAQLEEDEQVASTLVEDDEKVSTYQAEEDEQLARALQESLNMEPPPPRFDSGNIFNHYPFFYPSGYRVCAGCHTEIGHGRFLSCMGAVWHPECFRCNTCNEPITDHEFSMSGNRPYHKSCFKEQHHPRCDVCSNFKQDLEKTALFISVLTFELMQPRDTSYLLLDDGRKLCLECLDSAIMDTHCHPRQELI
BLAST of Carg27908 vs. NCBI nr
Match: XP_022928051.1 (protein DA1-related 1 [Cucurbita moschata] >XP_022928052.1 protein DA1-related 1 [Cucurbita moschata] >XP_022928053.1 protein DA1-related 1 [Cucurbita moschata] >XP_022928054.1 protein DA1-related 1 [Cucurbita moschata]) HSP 1 Score: 343.2 bits (879), Expect = 9.9e-91 Identity = 309/348 (88.79%), Postives = 311/348 (89.37%), Query Frame = 0
BLAST of Carg27908 vs. NCBI nr
Match: XP_023512539.1 (protein DA1-related 1 [Cucurbita pepo subsp. pepo] >XP_023512540.1 protein DA1-related 1 [Cucurbita pepo subsp. pepo] >XP_023512541.1 protein DA1-related 1 [Cucurbita pepo subsp. pepo] >XP_023512542.1 protein DA1-related 1 [Cucurbita pepo subsp. pepo] >XP_023512543.1 protein DA1-related 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.8 bits (787), Expect = 4.6e-80 Identity = 293/348 (84.20%), Postives = 296/348 (85.06%), Query Frame = 0
BLAST of Carg27908 vs. NCBI nr
Match: XP_004148039.2 (PREDICTED: protein DA1-related 1 isoform X1 [Cucumis sativus] >XP_011649353.1 PREDICTED: protein DA1-related 1 isoform X1 [Cucumis sativus] >KGN62017.1 hypothetical protein Csa_2G286500 [Cucumis sativus]) HSP 1 Score: 306.6 bits (784), Expect = 1.0e-79 Identity = 261/348 (75.00%), Postives = 269/348 (77.30%), Query Frame = 0
BLAST of Carg27908 vs. NCBI nr
Match: XP_008457805.1 (PREDICTED: protein DA1-related 1-like isoform X1 [Cucumis melo] >XP_008457808.1 PREDICTED: protein DA1-related 1-like isoform X1 [Cucumis melo] >XP_016902169.1 PREDICTED: protein DA1-related 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 298.1 bits (762), Expect = 3.6e-77 Identity = 295/370 (79.73%), Postives = 303/370 (81.89%), Query Frame = 0
BLAST of Carg27908 vs. NCBI nr
Match: XP_022971673.1 (protein DA1-related 1 isoform X1 [Cucurbita maxima] >XP_022971674.1 protein DA1-related 1 isoform X1 [Cucurbita maxima] >XP_022971675.1 protein DA1-related 1 isoform X1 [Cucurbita maxima] >XP_022971676.1 protein DA1-related 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 295.0 bits (754), Expect = 3.1e-76 Identity = 289/348 (83.05%), Postives = 292/348 (83.91%), Query Frame = 0
BLAST of Carg27908 vs. TAIR10
Match: AT4G36860.1 (LIM domain-containing protein) HSP 1 Score: 217.2 bits (552), Expect = 1.5e-56 Identity = 102/173 (58.96%), Postives = 116/173 (67.05%), Query Frame = 0
BLAST of Carg27908 vs. TAIR10
Match: AT1G19270.1 (DA1) HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39 Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 0
BLAST of Carg27908 vs. TAIR10
Match: AT2G39830.1 (DA1-related protein 2) HSP 1 Score: 136.3 bits (342), Expect = 3.3e-32 Identity = 70/175 (40.00%), Postives = 95/175 (54.29%), Query Frame = 0
BLAST of Carg27908 vs. TAIR10
Match: AT5G66610.2 (DA1-related protein 7) HSP 1 Score: 95.1 bits (235), Expect = 8.5e-20 Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of Carg27908 vs. TAIR10
Match: AT5G66620.1 (DA1-related protein 6) HSP 1 Score: 90.5 bits (223), Expect = 2.1e-18 Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 0
BLAST of Carg27908 vs. Swiss-Prot
Match: sp|Q8W4F0|DAR1_ARATH (Protein DA1-related 1 OS=Arabidopsis thaliana OX=3702 GN=DAR1 PE=1 SV=3) HSP 1 Score: 217.2 bits (552), Expect = 2.7e-55 Identity = 102/173 (58.96%), Postives = 116/173 (67.05%), Query Frame = 0
BLAST of Carg27908 vs. Swiss-Prot
Match: sp|P0C7Q8|DA1_ARATH (Protein DA1 OS=Arabidopsis thaliana OX=3702 GN=DA1 PE=1 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.3e-38 Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = 0
BLAST of Carg27908 vs. Swiss-Prot
Match: sp|Q0WSN2|DAR2_ARATH (Protein DA1-related 2 OS=Arabidopsis thaliana OX=3702 GN=DAR2 PE=1 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.0e-31 Identity = 70/175 (40.00%), Postives = 95/175 (54.29%), Query Frame = 0
BLAST of Carg27908 vs. Swiss-Prot
Match: sp|Q9FJX9|DAR7_ARATH (Protein DA1-related 7 OS=Arabidopsis thaliana OX=3702 GN=DAR7 PE=2 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18 Identity = 51/137 (37.23%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of Carg27908 vs. Swiss-Prot
Match: sp|Q9FJX8|DAR6_ARATH (Protein DA1-related 6 OS=Arabidopsis thaliana OX=3702 GN=DAR6 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.8e-17 Identity = 46/137 (33.58%), Postives = 73/137 (53.28%), Query Frame = 0
BLAST of Carg27908 vs. TrEMBL
Match: tr|A0A0A0LMP8|A0A0A0LMP8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G286500 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 6.8e-80 Identity = 261/348 (75.00%), Postives = 269/348 (77.30%), Query Frame = 0
BLAST of Carg27908 vs. TrEMBL
Match: tr|A0A1S4E1R4|A0A1S4E1R4_CUCME (protein DA1-related 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497408 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.4e-77 Identity = 295/370 (79.73%), Postives = 303/370 (81.89%), Query Frame = 0
BLAST of Carg27908 vs. TrEMBL
Match: tr|A0A1S3C6D1|A0A1S3C6D1_CUCME (protein DA1-related 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497408 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.3e-67 Identity = 125/173 (72.25%), Postives = 130/173 (75.14%), Query Frame = 0
BLAST of Carg27908 vs. TrEMBL
Match: tr|A0A1S3C6I4|A0A1S3C6I4_CUCME (protein DA1-related 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497408 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 3.4e-63 Identity = 262/298 (87.92%), Postives = 268/298 (89.93%), Query Frame = 0
BLAST of Carg27908 vs. TrEMBL
Match: tr|A0A067K6U3|A0A067K6U3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12283 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.7e-60 Identity = 218/350 (62.29%), Postives = 242/350 (69.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |