Carg11190 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11190
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase
Location	Cucurbita_argyrosperma_scaffold_013 : 476430 .. 480709 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTGCAGCTACAACAAGCGTTGTGCCGCCGAATCGGCGGCGTGCGGTTAGTGCCCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAACCGATCTTGAGTTTCGATCAGATGGGCATTAAGGATGATCTTCTCCGTGGAATATATGCTTACGGTTTTGAAAAGCCCTCGGCTATTCAGCAGAGAGCTGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAAGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCACTTACCGTTTGCCAGGTGGTTGATACATCCAGTAGAGAGTGAGTCCCGTTTACTCTATCGAGTGTTCAATGTTTCATGCCTCTCTTCCTCTTAATATATTTCTTATTTTTGTATTGGATTCAAATTCTATAGAAGTTGTGTAGTTCCTAGCTCAGAAATCCAAATGCACAGGAAGAAAATTGTTTGGATGTCAGTTGGTTCTTTTCACAAGAAGTTGTTATAACCTCGTGTTATTGCTTTGGAAATTTCCCAAGGAAGCCAAATTAATGAAACCTCCCCAAAGTACCACTACATTCGTTTTTTTGTCGTAGAAGATTTGAATATGCATTCAACTCCTAGCTCAGGAGTTTTTTTCAATTTACATATGATCGATTTTGTAAGACGATCTCTTTAACTTCAAACCCTTATGATCATTATGCATCTTAATCTATTCAGGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACTCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACTCATGTATCGGAGGAAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACACTGCGTACCCGAGCCATTAAGCTGTTAATTTTGGTAATTTTGGGTGCCCTTCAATTTATCTCTCCTGTTAGCAGTATAATTATCTCTCTTTTATCATGTCATTTTCTAATATTTGCTTTTTCAGGATGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAACTTCAGGTTTTCCTTCTCTCCCCCTTCCCCCCAATGTGTTAATGATTGTGCTCATGGGAGTCATAGGAGGATAAAAATGAAATGCAGCTCTGTCATTGAATTGTTGCTAAGCATGTCTTCTTTAACTTGTTGAACATGAAAATTATTATTTTTCATACATGCTTTTCTAAACGTATTGATGACAAATTTGTAGGTACAATAATATTTTTTCTGCAATATTACATGTTGATTTTCTATTTTGTACGGGAAGAGTTAGGACTTCTCAGACGACCAAGAAATAACAGTAGTGTTTTCCCAAATAATTTTTTATGGTTTCTATGATGTCGTGCTTGATGTGGCTGACATTTAATCTTGATTTTTGCTTGCATTTGTTTCCTTCATGTGTCAGTTTATAACAAATGTGATATTGATTATATATTCTTGTACATATGGGATCTCTAAATTTTATACTTTATATGTCATTTTATGCACTGTTTACCGGTTTGGTCATGAGCAACTAGTGTCTTTTACCTGTTTTTATGTATTTTTCTATTTTTAGGTTGGTTGATTTAATGAGTTTTCCCATCAATATTAATGATAGGTTGTCTTGATTTCTGCTACCCTTCCTCATGAAATCCTTGAGATGACAAACAAGTTTATGACAGATCCTGTGAGGATCCTTGTCAAGCGTGATGAGTTAACTTTAGAGGTTTGTAATATTTTATTTGTAGATGATGAAATGCTCTCCTGAAATATATCAACACCCTGATGCATGCTTTTAAATTGACAGGGTATTAAGCAATTCTTCGTTGCAGTTGAAAGGGAAGAGTGGAAATTTGATACCTTATGTGATCTTTATGACACCTTGACTATCACCCAAGCTGTAATTTTCTGTAACACTAAGCGAAAGGTAATGTGGGTCAAATTTGTTTAGTTCTCCTTCAAGTAGATCTTCTAGAACTCTTGTCAGACTCATTCTGAAACAGAAAATATTTTATTGTTAGATATTTTATGCATGTTTGCCTTTATACATGATTTTGGTCTGTTCCGAATGTTTGGAACATTGTTTTATTATTGCGCAACCTTTGGTCCTCATCCTTATTTATTCTTTTAGTACAATTTTACCCGGCCACAGTGTGACCTGAAAAGTCTATTTGAGGATAGAACTAGCTTTTATTAATTAGAAAGAGCACATCATTGCATAAGGATAATCCCAGAGATCCTCTACACCCATAACCCCTGGTCACTATAACCCAAAAAGTACCCATATTTTACTGGACTTTCCTTCCAGATACTTGCTGAGGATCACTCTGAAGCTAACTATTAGTTGCAAGGCGTCCTACAGCCTCTATCACAACTACTTATCAGACCTATCCCTTACCCTTTTTCTACTATGTGCTTCTAACAACTGGATGCCTATCTCAGTTCTAGATCACATTGCACTGATTATTGGACTCCTTTATCTGATATGAGAATTTAAATATTTTCTCTTTCATGGGGGTTTCTGCCTTTTTGTATTTGCATACTATCATTGAAATTGTTTCTTATAGATTTTTTTATGTGATCTGCTGCCTCCAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCCCATATGCATGGGGACATGCCTCAAAAGGAAAGAGATGCAATCATGGGGGAGTTCCGATCTGGAACTACTCGTGTCCTAATCACTACTGATGTTTGGGCAAGAGGGCTTGATGTTCAGCAGGCAAGTTATTGGTTCTTTTATTTTATTAAATCTTTGTCAATGTGCCGTACAAATTCACGCTGCTCTAGTTGTAGTTGTCTTAGTTAATTTCATGTTGGTACTCAATGGAAGTTAGAATGAATAAATGATAAAATGATCTGATCGAGTATACTATTTTCTCTATGTTCTCCATAACTCTTCTTAGTGTCGAGTTGAGTGTTATAATGTCCACAAAATTATTTGTAACAGAATCATATGCATTAGTTCGATTGTCTTTAGTTCTATCATAGTGAAGATTGTCATTGTGCTTTCTTCATTCATGAGGTCCTTTTCTTCCCGCCCATTTGAGATAAGTGACAGTTTCTGTGGAGGCTACTTGTTTTTCAGTTCTTTGGTCACTAGTGAGGTTTACTGCGTCTTTTTGGTCTTCGGTTGTTTAGGAGTTATGTAACTATTTATTAGGTTTTATTCTTCTCGATTGGAGCCCTTTCTGTATAGTTAGTCCTGGTGACTTCCTTTCTGGGCGGTCCTTTTTGTTCTTTTGTTTTCTTTCATATTTCTCAATGAAACAGGTGTTTCGTATAGAAAAATGGTCTTCTATTTATGAACACACCATTAGTTCAGTTGATCACTTGGATACTTTGTGGATCATATGCATCAGTTATAGGTTACTAAGGTAGTTTTATCAAAGGATTTGAAGTTGTGTAAAATGATCATGGTGTTTTTTTCCATGTTTGGTGAATCACTAGATAATCATTTTCTGTTCTCTAGAAAAACATCTCTAAATGGTGTGATATATAGAGAAGAGTAGGCATTGGATTTTTTTAGGACAATTTTTTTTTCTAGTTTACATCATCAATTGGTACGTCCCACAGATCTCCGTGAATGTCCTAATTTGAACTCCCATTCGTATTGTAAATATCTTTGTACTTATTTTCCTTTCATTACTGATCGTGGCAAGGATCCCAAAAAATAGACGAGTTCTTATGTTTATTTGGCAAGAATCCCAAAAAATATACAAGTTCTTATGTTTATTTGCATTAACCTTTGTCAGGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAGCTTTACATTCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGTATGACACTTTATTCTATATTACAGTTAATTTCCTAGGATTCCGCTCAAAGTAAACAGTATGGATAACATGTAGCTTTATGTTTCCTTGCATGAAGGCCATGTTTATGATTTCTTACATGGAAGCTATGTCTAACTTGAAACTTCACCAACCTTGCGAAAGTAATGAAACATTTTTTAATGCGGATTTATGGCTTAACGCAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAA

mRNA sequence

ATGGCGGCTGCAGCTACAACAAGCGTTGTGCCGCCGAATCGGCGGCGTGCGGTTAGTGCCCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAACCGATCTTGAGTTTCGATCAGATGGGCATTAAGGATGATCTTCTCCGTGGAATATATGCTTACGGTTTTGAAAAGCCCTCGGCTATTCAGCAGAGAGCTGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAAGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCACTTACCGTTTGCCAGGTGGTTGATACATCCAGTAGAGAGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACTCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACTCATGTATCGGAGGAAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACACTGCGTACCCGAGCCATTAAGCTGTTAATTTTGGATGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAACTTCAGGTTGTCTTGATTTCTGCTACCCTTCCTCATGAAATCCTTGAGATGACAAACAAGTTTATGACAGATCCTGTGAGGATCCTTGTCAAGCGTGATGAGTTAACTTTAGAGGGTATTAAGCAATTCTTCGTTGCAGTTGAAAGGGAAGAGTGGAAATTTGATACCTTATGTGATCTTTATGACACCTTGACTATCACCCAAGCTGTAATTTTCTGTAACACTAAGCGAAAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCCCATATGCATGGGGACATGCCTCAAAAGGAAAGAGATGCAATCATGGGGGAGTTCCGATCTGGAACTACTCGTGTCCTAATCACTACTGATGTTTGGGCAAGAGGGCTTGATGTTCAGCAGGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAGCTTTACATTCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAA

Coding sequence (CDS)

ATGGCGGCTGCAGCTACAACAAGCGTTGTGCCGCCGAATCGGCGGCGTGCGGTTAGTGCCCCGGAAGACAAGTTGGAATTCGAGACGACGGAGGGGGTTGAACCGATCTTGAGTTTCGATCAGATGGGCATTAAGGATGATCTTCTCCGTGGAATATATGCTTACGGTTTTGAAAAGCCCTCGGCTATTCAGCAGAGAGCTGTGAGGCCGATTATTGAGGGTCGAGATGTTATTGCTCAAGCCCAATCTGGAACTGGCAAGACCTCCATGATTGCACTTACCGTTTGCCAGGTGGTTGATACATCCAGTAGAGAGGTGCAGGCCTTGATCTTGTCCCCTACGAGAGAATTGGCAACTCAGACAGAGAAGGTTATATTGGCAATTGGCGACTACATTAATATACAAGCACACTCATGTATCGGAGGAAAAAGTGTGGGTGAAGATATCAGAAAGCTTGAGTTTGGAGTTCAGGTTGTGTCAGGAACTCCTGGAAGAGTCTGTGACATGATCAAGAGAAGGACACTGCGTACCCGAGCCATTAAGCTGTTAATTTTGGATGAGTCTGATGAAATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAACTTCAGGTTGTCTTGATTTCTGCTACCCTTCCTCATGAAATCCTTGAGATGACAAACAAGTTTATGACAGATCCTGTGAGGATCCTTGTCAAGCGTGATGAGTTAACTTTAGAGGGTATTAAGCAATTCTTCGTTGCAGTTGAAAGGGAAGAGTGGAAATTTGATACCTTATGTGATCTTTATGACACCTTGACTATCACCCAAGCTGTAATTTTCTGTAACACTAAGCGAAAGGTTGAATGGTTGACTGAGAAGATGCGAAGTAATAACTTCACAGTTTCCCATATGCATGGGGACATGCCTCAAAAGGAAAGAGATGCAATCATGGGGGAGTTCCGATCTGGAACTACTCGTGTCCTAATCACTACTGATGTTTGGGCAAGAGGGCTTGATGTTCAGCAGGTATCACTAGTGATAAATTATGACCTTCCAAACAATCGAGAGCTTTACATTCACAGGATAGGAAGGTCGGGTCGGTTTGGGCGCAAGGGTGTTGCTATTAACTTTGTGAAAAGTGATGACATCAAGATCCTGAGAGATATTGAGCAATACTACAGTACCCAGATTGATGAGATGCCCATGAACGTTGCTGATTTGATTTAA

Protein sequence

MAAAATTSVVPPNRRRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI

Homology

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BLAST of Carg11190 vs. NCBI nr
Match: XP_022983495.1 (eukaryotic initiation factor 4A-3 [Cucurbita maxima])

HSP 1 Score: 780.8 bits (2015), Expect = 2.3e-222
Identity = 410/410 (100.00%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
Sbjct: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. NCBI nr
Match: XP_022935146.1 (eukaryotic initiation factor 4A-3 [Cucurbita moschata] >XP_023528747.1 eukaryotic initiation factor 4A-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.8 bits (2002), Expect = 7.4e-221
Identity = 393/394 (99.75%), Postives = 394/394 (100.00%), Query Frame = 0


Query: 17  AVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRD 76
           AV+APEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRD
Sbjct: 17  AVTAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRD 76

Query: 77  VIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQA 136
           VIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQA
Sbjct: 77  VIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQA 136

Query: 137 HSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGF 196
           HSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGF
Sbjct: 137 HSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGF 196

Query: 197 KDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVA 256
           KDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVA
Sbjct: 197 KDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVA 256

Query: 257 VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERD 316
           VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERD
Sbjct: 257 VEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERD 316

Query: 317 AIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 376
           AIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA
Sbjct: 317 AIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVA 376

Query: 377 INFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           INFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 377 INFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. NCBI nr
Match: XP_022949081.1 (eukaryotic initiation factor 4A-3-like [Cucurbita moschata] >XP_022998447.1 eukaryotic initiation factor 4A-3-like [Cucurbita maxima] >XP_023525647.1 eukaryotic initiation factor 4A-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 775.4 bits (2001), Expect = 9.6e-221
Identity = 400/410 (97.56%), Postives = 406/410 (99.02%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAA XXXXXXX   RA++APEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAAXXXXXXXNRRRAITAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIDGRDVIAQAQSGTGKTSMIALTVCQMVDTSSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. NCBI nr
Match: XP_004148574.1 (PREDICTED: eukaryotic initiation factor 4A-3 [Cucumis sativus] >KGN58518.1 hypothetical protein Csa_3G654480 [Cucumis sativus])

HSP 1 Score: 773.9 bits (1997), Expect = 2.8e-220
Identity = 398/410 (97.07%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAA  XXXXXX   R +SAPEDKLEFETTEGVEPIL+FDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATXXXXXXNRRRTISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ+VDT+SREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. NCBI nr
Match: XP_008461865.1 (PREDICTED: eukaryotic initiation factor 4A-3 [Cucumis melo])

HSP 1 Score: 771.5 bits (1991), Expect = 1.4e-219
Identity = 388/395 (98.23%), Postives = 394/395 (99.75%), Query Frame = 0


Query: 16  RAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGR 75
           R +SAPEDKLEFETTEGVEPIL+FDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGR
Sbjct: 15  RRISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGR 74

Query: 76  DVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQ 135
           DVIAQAQSGTGKTSMIALTVCQ+VDT+SREVQALILSPTRELATQTEKVILAIGDYINIQ
Sbjct: 75  DVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQTEKVILAIGDYINIQ 134

Query: 136 AHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRG 195
           AH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLL+LDESDEMLSRG
Sbjct: 135 AHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRG 194

Query: 196 FKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV 255
           FKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV
Sbjct: 195 FKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV 254

Query: 256 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKER 315
           AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKER
Sbjct: 255 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKER 314

Query: 316 DAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 375
           DAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV
Sbjct: 315 DAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 374

Query: 376 AINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           AINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 375 AINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 409

[Close]

BLAST of Carg11190 vs. TAIR10
Match: AT3G19760.1 (eukaryotic initiation factor 4A-III)

HSP 1 Score: 697.2 bits (1798), Expect = 6.0e-201
Identity = 348/388 (89.69%), Postives = 372/388 (95.88%), Query Frame = 0


Query: 23  DKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQ 82
           DKL FETT+G+EPI SF+ MGIK+D+LRG+Y YGFEKPSAIQQRAV PI++GRDVIAQAQ
Sbjct: 21  DKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQ 80

Query: 83  SGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGG 142
           SGTGKTSMIAL+VCQVVDTSSREVQALILSPTRELATQTEK I AIG + NIQAH+CIGG
Sbjct: 81  SGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGG 140

Query: 143 KSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYD 202
            SVGEDIRKLE GV VVSGTPGRVCDMIKRR+LRTRAIKLLILDESDEMLSRGFKDQIYD
Sbjct: 141 NSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYD 200

Query: 203 VYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEW 262
           VYRYLPP+LQV L+SATLPHEILEMT+KFMT+PV+ILVKRDELTLEGIKQFFVAVE+EEW
Sbjct: 201 VYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEW 260

Query: 263 KFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEF 322
           KFDTLCDLYDTLTITQAVIFCNTKRKV++L+EKMRS+NFTVS MHGDMPQKERDAIM EF
Sbjct: 261 KFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEF 320

Query: 323 RSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 382
           RSG +RVLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS
Sbjct: 321 RSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 380

Query: 383 DDIKILRDIEQYYSTQIDEMPMNVADLI 411
           DDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 381 DDIKILRDIEQYYSTQIDEMPMNVADLI 408

[Close]

BLAST of Carg11190 vs. TAIR10
Match: AT1G51380.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 563.9 bits (1452), Expect = 8.0e-161
Identity = 280/389 (71.98%), Postives = 334/389 (85.86%), Query Frame = 0


Query: 22  EDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQA 81
           E+ L FETT+G++PI SFD MG+ D +LRG+Y YG++KPS IQQRA+ PI++GRDVIAQA
Sbjct: 7   EENLVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQA 66

Query: 82  QSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIG 141
           QSGTGKTSMIA++VCQ+V+ SSR+VQ L+LSP+RELA+QTEK I AIG + NIQAH+CIG
Sbjct: 67  QSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIG 126

Query: 142 GKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIY 201
           GKS+GEDI+KLE GV  VSGTPGRV DMIKR +L+T+A+KLL+LDESDEMLS+G KDQIY
Sbjct: 127 GKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIY 186

Query: 202 DVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREE 261
           DVYR LP ++QV LISATLP EILEMT KFMTDPVRILVK DELTLEGIKQ++V V++EE
Sbjct: 187 DVYRALPHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEE 246

Query: 262 WKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGE 321
           WKFDTLCDLY  LTI QA+IFCNT++KV+WLTEKMRS+NF VS MHGD  QKERD IM +
Sbjct: 247 WKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQ 306

Query: 322 FRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 381
           FRS  +RVLI +DVWARG+DVQ VS VINYD+PNN ELYIHRIGR+     +GVAINFVK
Sbjct: 307 FRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAXXXXXEGVAINFVK 366

Query: 382 SDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           S D+K L+DIE++Y T+I EMP   ADL+
Sbjct: 367 SSDMKDLKDIERHYGTKIREMP---ADLV 392

[Close]

BLAST of Carg11190 vs. TAIR10
Match: AT1G54270.1 (eif4a-2)

HSP 1 Score: 496.5 bits (1277), Expect = 1.6e-140
Identity = 244/373 (65.42%), Postives = 305/373 (81.77%), Query Frame = 0


Query: 38  SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ 97
           SFD MG++++LLRGIYAYGFEKPSAIQQR + P  +G DVI QAQSGTGKT+     V Q
Sbjct: 40  SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99

Query: 98  VVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQ 157
            +D +  + QAL+L+PTRELA Q EKV+ A+GDY  ++ H+C+GG SV ED R L+ GV 
Sbjct: 100 QLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVH 159

Query: 158 VVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLIS 217
           VV GTPGRV DM++R++LR   IK+ +LDE+DEMLSRGFKDQIYD+++ LPP++QV + S
Sbjct: 160 VVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219

Query: 218 ATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 277
           AT+P E LE+T KFM+ PVRILVKRDELTLEGIKQF+V VE+E+WK +TLCDLY+TL IT
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAIT 279

Query: 278 QAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 337
           Q+VIF NT+RKV+WLT+KMRS + TVS  HGDM Q  RD IM EFRSG++RVLITTD+ A
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339

Query: 338 RGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYST 397
           RG+DVQQVSLVIN+DLP   E Y+HRIGRSGRFGRKGVAINFV  DD ++L DI+++Y+ 
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNV 399

Query: 398 QIDEMPMNVADLI 411
            ++E+P NVADL+
Sbjct: 400 VVEELPSNVADLL 412

[Close]

BLAST of Carg11190 vs. TAIR10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 492.7 bits (1267), Expect = 2.3e-139
Identity = 242/373 (64.88%), Postives = 304/373 (81.50%), Query Frame = 0


Query: 38  SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ 97
           SFD M ++ DLLRGIYAYGFEKPSAIQQR + P  +G DVI QAQSGTGKT+     V Q
Sbjct: 42  SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ 101

Query: 98  VVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQ 157
            +D S  + QAL+L+PTRELA Q EKV+ A+GDY+ ++A +C+GG SV ED R L+ GV 
Sbjct: 102 QLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVH 161

Query: 158 VVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLIS 217
           VV GTPGRV D+++R++LR  AIK+ +LDE+DEMLSRGFKDQIYD+++ LP ++QV + S
Sbjct: 162 VVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 221

Query: 218 ATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 277
           AT+P E LE+T KFM  PVRILVKRDELTLEGIKQF+V V++EEWK +TLCDLY+TL IT
Sbjct: 222 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAIT 281

Query: 278 QAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 337
           Q+VIF NT+RKV+WLT+KMRS + TVS  HGDM Q  RD IM EFRSG++RVLITTD+ A
Sbjct: 282 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 341

Query: 338 RGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYST 397
           RG+DVQQVSLVIN+DLP   E Y+HRIGRSGRFGRKGVAINF+ S+D +++ DI+++Y+ 
Sbjct: 342 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNV 401

Query: 398 QIDEMPMNVADLI 411
            ++E+P NVADL+
Sbjct: 402 VVEELPSNVADLL 414

[Close]

BLAST of Carg11190 vs. TAIR10
Match: AT3G13920.2 (eukaryotic translation initiation factor 4A1)

HSP 1 Score: 477.2 bits (1227), Expect = 9.8e-135
Identity = 237/351 (67.52%), Postives = 288/351 (82.05%), Query Frame = 0


Query: 38  SFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ 97
           SFD MG++++LLRGIYAYGFEKPSAIQQR + P  +G DVI QAQSGTGKT+     V Q
Sbjct: 40  SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99

Query: 98  VVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQ 157
            +D S  + QAL+L+PTRELA Q EKV+ A+GDY+ ++ H+C+GG SV ED R L+ GV 
Sbjct: 100 QLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 159

Query: 158 VVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLIS 217
           VV GTPGRV DM+KR++LR   IK+ +LDE+DEMLSRGFKDQIYD+++ LPP++QV + S
Sbjct: 160 VVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219

Query: 218 ATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTIT 277
           AT+P E LE+T KFM+ PVRILVKRDELTLEGIKQF+V VE+EEWK +TLCDLY+TL IT
Sbjct: 220 ATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAIT 279

Query: 278 QAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWA 337
           Q+VIF NT+RKV+WLT+KMRS + TVS  HGDM Q  RD IM EFRSG++RVLITTD+ A
Sbjct: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339

Query: 338 RGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKIL 389
           RG+DVQQVSLVIN+DLP   E Y+HRIGRSGRFGRKGVAINFV  DD ++L
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390

[Close]

BLAST of Carg11190 vs. Swiss-Prot
Match: sp|P41380|IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 1.3e-205
Identity = 360/389 (92.54%), Postives = 373/389 (95.89%), Query Frame = 0


Query: 22  EDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQA 81
           ED+L FET++GVEPI SF +MGIKDDLLRG+Y YGFEKPSAIQQRAV PII GRDVIAQA
Sbjct: 3   EDRLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQA 62

Query: 82  QSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIG 141
           QSGTGKTSMIALTVCQ+VDT S EVQALILSPTRELA QTEKVILAIGDYIN+QAH+CIG
Sbjct: 63  QSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIG 122

Query: 142 GKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIY 201
           GKSVGEDIRKLE GVQVVSGTPGRVCDMIKRRTLRTR IKLLILDESDEMLSRGFKDQIY
Sbjct: 123 GKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIY 182

Query: 202 DVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREE 261
           DVYRYLPPELQVVLISATLP+EILE+T+KFMTDPVRILVKRDELTLEGIKQFFVAVE+EE
Sbjct: 183 DVYRYLPPELQVVLISATLPNEILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEE 242

Query: 262 WKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGE 321
           WKFDTLCDLYDTLTITQAVIFCNTKRKV+WLT KMR NNFTVS MHGDMPQKERDAIM E
Sbjct: 243 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAE 302

Query: 322 FRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 381
           FR GTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK
Sbjct: 303 FRGGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 362

Query: 382 SDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           SDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 363 SDDIKILRDIEQYYSTQIDEMPMNVADLI 391

[Close]

BLAST of Carg11190 vs. Swiss-Prot
Match: sp|Q5VNM3|IF43A_ORYSJ (Eukaryotic initiation factor 4A-III homolog A OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3A PE=1 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 3.1e-202
Identity = 352/389 (90.49%), Postives = 372/389 (95.63%), Query Frame = 0


Query: 22  EDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQA 81
           ++ L FET+ GVE I SFDQMGI+DDLLRGIYAYGFEKPSAIQQRAV PII GRDVIAQA
Sbjct: 16  DENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQA 75

Query: 82  QSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIG 141
           QSGTGKTSMI+L+VCQ+VDT+ REVQALILSPTRELA QTE+V+LAIGD+INIQ H+CIG
Sbjct: 76  QSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIG 135

Query: 142 GKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIY 201
           GKS+GEDIRKLE GV VVSGTPGRVCDMIKRRTLRTRAIKLLILDE+DEML RGFKDQIY
Sbjct: 136 GKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIY 195

Query: 202 DVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREE 261
           DVYRYLPPELQV LISATLPHEILEMT+KFMTDPVRILVKRDELTLEGIKQFFVAVE+EE
Sbjct: 196 DVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEE 255

Query: 262 WKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGE 321
           WKFDTLCDLYDTLTITQAVIFCNTKRKV+WLTE+MRSNNFTVS MHGDMPQKERDAIMGE
Sbjct: 256 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGE 315

Query: 322 FRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 381
           FRSG TRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK
Sbjct: 316 FRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 375

Query: 382 SDDIKILRDIEQYYSTQIDEMPMNVADLI 411
            +DI+ILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 376 KEDIRILRDIEQYYSTQIDEMPMNVADLI 404

[Close]

BLAST of Carg11190 vs. Swiss-Prot
Match: sp|Q10I26|IF43B_ORYSJ (Eukaryotic initiation factor 4A-III homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3B PE=1 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 3.1e-202
Identity = 352/389 (90.49%), Postives = 372/389 (95.63%), Query Frame = 0


Query: 22  EDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQA 81
           ++ L FET+ GVE I SFDQMGI++DLLRGIYAYGFEKPSAIQQRAV PII GRDVIAQA
Sbjct: 16  DENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQA 75

Query: 82  QSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIG 141
           QSGTGKTSMI+L+VCQ+VDT+ REVQALILSPTRELA QTE+V+LAIGDYINIQ H+CIG
Sbjct: 76  QSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIG 135

Query: 142 GKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIY 201
           GKS+GEDIRKLE GV VVSGTPGRVCDMIKRRTLRTRAIKLLILDE+DEML RGFKDQIY
Sbjct: 136 GKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIY 195

Query: 202 DVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREE 261
           DVYRYLPPELQV LISATLPHEILEMT+KFMTDPVRILVKRDELTLEGIKQFFVAVE+EE
Sbjct: 196 DVYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEE 255

Query: 262 WKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGE 321
           WKFDTLCDLYDTLTITQAVIFCNTKRKV+WLTE+MRSNNFTVS MHGDMPQKERDAIMGE
Sbjct: 256 WKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGE 315

Query: 322 FRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 381
           FRSG TRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK
Sbjct: 316 FRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 375

Query: 382 SDDIKILRDIEQYYSTQIDEMPMNVADLI 411
            +DI+ILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 376 KEDIRILRDIEQYYSTQIDEMPMNVADLI 404

[Close]

BLAST of Carg11190 vs. Swiss-Prot
Match: sp|Q94A52|RH2_ARATH (Eukaryotic initiation factor 4A-III homolog OS=Arabidopsis thaliana OX=3702 GN=EIF4A3 PE=1 SV=2)

HSP 1 Score: 697.2 bits (1798), Expect = 1.1e-199
Identity = 348/388 (89.69%), Postives = 372/388 (95.88%), Query Frame = 0


Query: 23  DKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQ 82
           DKL FETT+G+EPI SF+ MGIK+D+LRG+Y YGFEKPSAIQQRAV PI++GRDVIAQAQ
Sbjct: 21  DKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQ 80

Query: 83  SGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGG 142
           SGTGKTSMIAL+VCQVVDTSSREVQALILSPTRELATQTEK I AIG + NIQAH+CIGG
Sbjct: 81  SGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGG 140

Query: 143 KSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYD 202
            SVGEDIRKLE GV VVSGTPGRVCDMIKRR+LRTRAIKLLILDESDEMLSRGFKDQIYD
Sbjct: 141 NSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYD 200

Query: 203 VYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEW 262
           VYRYLPP+LQV L+SATLPHEILEMT+KFMT+PV+ILVKRDELTLEGIKQFFVAVE+EEW
Sbjct: 201 VYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEW 260

Query: 263 KFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEF 322
           KFDTLCDLYDTLTITQAVIFCNTKRKV++L+EKMRS+NFTVS MHGDMPQKERDAIM EF
Sbjct: 261 KFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEF 320

Query: 323 RSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 382
           RSG +RVLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS
Sbjct: 321 RSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 380

Query: 383 DDIKILRDIEQYYSTQIDEMPMNVADLI 411
           DDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 381 DDIKILRDIEQYYSTQIDEMPMNVADLI 408

[Close]

BLAST of Carg11190 vs. Swiss-Prot
Match: sp|Q9VHS8|IF4A3_DROME (Eukaryotic initiation factor 4A-III OS=Drosophila melanogaster OX=7227 GN=CG7483 PE=1 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 3.2e-183
Identity = 314/386 (81.35%), Postives = 354/386 (91.71%), Query Frame = 0


Query: 25  LEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGRDVIAQAQSG 84
           +EFET+E VE I +F+ M +K++LLRGIYAYGFEKPSAIQQR++ PI++GRDVIAQAQSG
Sbjct: 14  VEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSG 73

Query: 85  TGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQAHSCIGGKS 144
           TGKT+  ++++ Q +DT+ RE Q L LSPTRELA Q +KVILA+GD +N+Q H CIGG +
Sbjct: 74  TGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTN 133

Query: 145 VGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRGFKDQIYDVY 204
           +GEDIRKL++G  +VSGTPGRV DMIKRR LRTRAIK+L+LDE+DEML++GFK+QIYDVY
Sbjct: 134 LGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVY 193

Query: 205 RYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKF 264
           RYLPP  QVVLISATLPHEILEMT+KFMTDP+RILVKRDELTLEGIKQFFVAVEREEWKF
Sbjct: 194 RYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKF 253

Query: 265 DTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRS 324
           DTLCDLYDTLTITQAVIFCNTKRKV+WLTEKMR  NFTVS MHGDMPQKERD IM EFR+
Sbjct: 254 DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRA 313

Query: 325 GTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 384
           G +RVLITTDVWARG+DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD
Sbjct: 314 GQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 373

Query: 385 IKILRDIEQYYSTQIDEMPMNVADLI 411
           I+ILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 374 IRILRDIEQYYSTQIDEMPMNVADLI 399

[Close]

BLAST of Carg11190 vs. TrEMBL
Match: tr|A0A0A0L9P0|A0A0A0L9P0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G654480 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.9e-220
Identity = 398/410 (97.07%), Postives = 404/410 (98.54%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAA  XXXXXX   R +SAPEDKLEFETTEGVEPIL+FDQMGIKDDLLRGIYAYGFEKP
Sbjct: 1   MAAAATXXXXXXNRRRTISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQ+VDT+SREVQALILSPTRELATQ
Sbjct: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           KLL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV
Sbjct: 181 KLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. TrEMBL
Match: tr|A0A1S3CH11|A0A1S3CH11_CUCME (eukaryotic initiation factor 4A-3 OS=Cucumis melo OX=3656 GN=LOC103500360 PE=4 SV=1)

HSP 1 Score: 771.5 bits (1991), Expect = 9.2e-220
Identity = 388/395 (98.23%), Postives = 394/395 (99.75%), Query Frame = 0


Query: 16  RAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGR 75
           R +SAPEDKLEFETTEGVEPIL+FDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGR
Sbjct: 15  RRISAPEDKLEFETTEGVEPILTFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVRPIIEGR 74

Query: 76  DVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQTEKVILAIGDYINIQ 135
           DVIAQAQSGTGKTSMIALTVCQ+VDT+SREVQALILSPTRELATQTEKVILAIGDYINIQ
Sbjct: 75  DVIAQAQSGTGKTSMIALTVCQMVDTTSREVQALILSPTRELATQTEKVILAIGDYINIQ 134

Query: 136 AHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLILDESDEMLSRG 195
           AH+CIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLL+LDESDEMLSRG
Sbjct: 135 AHACIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEMLSRG 194

Query: 196 FKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV 255
           FKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV
Sbjct: 195 FKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV 254

Query: 256 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKER 315
           AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKER
Sbjct: 255 AVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNNFTVSHMHGDMPQKER 314

Query: 316 DAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 375
           DAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV
Sbjct: 315 DAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGV 374

Query: 376 AINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           AINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 375 AINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 409

[Close]

BLAST of Carg11190 vs. TrEMBL
Match: tr|A0A067L4G5|A0A067L4G5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24208 PE=4 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 1.7e-210
Identity = 375/410 (91.46%), Postives = 390/410 (95.12%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAA           R  +A +DKL FETTEG+EPI SFD+MGIK+DLLRGIYAYGFEKP
Sbjct: 1   MAAAVTSVVPAGRSARRAAAEDDKLVFETTEGIEPIASFDEMGIKNDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAV PII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELA Q
Sbjct: 61  SAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQLVDTSSREVQALILSPTRELAAQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLE+GV VVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           +LL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP+EILEMT+KFMTDPV+ILV
Sbjct: 181 RLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVKILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV+WLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVS MHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. TrEMBL
Match: tr|A0A2C9W2H3|A0A2C9W2H3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G061200 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 1.5e-209
Identity = 374/410 (91.22%), Postives = 388/410 (94.63%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAA           R  +  +DKL FETTEG+EPI SFD+MGIK+DLLRGIYAYGFEKP
Sbjct: 1   MAAAATSVVPAGRSARRAALEDDKLVFETTEGIEPITSFDEMGIKNDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAV PII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELA Q
Sbjct: 61  SAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQLVDTSSREVQALILSPTRELAAQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLEFGV VVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEFGVHVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           +LL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP+EILEMT+KFMTDPV+ILV
Sbjct: 181 RLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVKILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV+WLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVS MHGDMPQKERDAIM EFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSSMHGDMPQKERDAIMSEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

[Close]

BLAST of Carg11190 vs. TrEMBL
Match: tr|A0A2C9V034|A0A2C9V034_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G102100 PE=4 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 5.6e-209
Identity = 372/410 (90.73%), Postives = 388/410 (94.63%), Query Frame = 0


Query: 1   MAAAXXXXXXXXXXXRAVSAPEDKLEFETTEGVEPILSFDQMGIKDDLLRGIYAYGFEKP 60
           MAAA           R  +  +DKL FETTEG+EPI SFD+MGIK+DLLRGIYAYGFEKP
Sbjct: 1   MAAAATSVVPAGRSARRAAVEDDKLVFETTEGIEPITSFDEMGIKNDLLRGIYAYGFEKP 60

Query: 61  SAIQQRAVRPIIEGRDVIAQAQSGTGKTSMIALTVCQVVDTSSREVQALILSPTRELATQ 120
           SAIQQRAV PII+GRDVIAQAQSGTGKTSMIALTVCQ+VDTSSREVQALILSPTRELA Q
Sbjct: 61  SAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQLVDTSSREVQALILSPTRELAAQ 120

Query: 121 TEKVILAIGDYINIQAHSCIGGKSVGEDIRKLEFGVQVVSGTPGRVCDMIKRRTLRTRAI 180
           TEKVILAIGDYINIQAH+CIGGKSVGEDIRKLE+GV VVSGTPGRVCDMIKRRTLRTRAI
Sbjct: 121 TEKVILAIGDYINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAI 180

Query: 181 KLLILDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILV 240
           +LL+LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLP+EILEMT+KFMTDPV+ILV
Sbjct: 181 RLLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEMTSKFMTDPVKILV 240

Query: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVEWLTEKMRSNN 300
           KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKV+WLTEKMRSNN
Sbjct: 241 KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNN 300

Query: 301 FTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360
           FTVS MHGDMPQ+ERDAIM EFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY
Sbjct: 301 FTVSSMHGDMPQRERDAIMSEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELY 360

Query: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 411
           IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
Sbjct: 361 IHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI 410

The following BLAST results are available for this feature:

BLAST of Carg11190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983495.1	2.3e-222	100.00	eukaryotic initiation factor 4A-3 [Cucurbita maxima]	[more]
XP_022935146.1	7.4e-221	99.75	eukaryotic initiation factor 4A-3 [Cucurbita moschata] >XP_023528747.1 eukaryoti...	[more]
XP_022949081.1	9.6e-221	97.56	eukaryotic initiation factor 4A-3-like [Cucurbita moschata] >XP_022998447.1 euka...	[more]
XP_004148574.1	2.8e-220	97.07	PREDICTED: eukaryotic initiation factor 4A-3 [Cucumis sativus] >KGN58518.1 hypot...	[more]
XP_008461865.1	1.4e-219	98.23	PREDICTED: eukaryotic initiation factor 4A-3 [Cucumis melo]	[more]

BLAST of Carg11190 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19760.1	6.0e-201	89.69	eukaryotic initiation factor 4A-III	[more]
AT1G51380.1	8.0e-161	71.98	DEA(D/H)-box RNA helicase family protein	[more]
AT1G54270.1	1.6e-140	65.42	eif4a-2	[more]
AT1G72730.1	2.3e-139	64.88	DEA(D/H)-box RNA helicase family protein	[more]
AT3G13920.2	9.8e-135	67.52	eukaryotic translation initiation factor 4A1	[more]

BLAST of Carg11190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P41380\|IF4A3_NICPL	1.3e-205	92.54	Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1	[more]
sp\|Q5VNM3\|IF43A_ORYSJ	3.1e-202	90.49	Eukaryotic initiation factor 4A-III homolog A OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q10I26\|IF43B_ORYSJ	3.1e-202	90.49	Eukaryotic initiation factor 4A-III homolog B OS=Oryza sativa subsp. japonica OX...	[more]
sp\|Q94A52\|RH2_ARATH	1.1e-199	89.69	Eukaryotic initiation factor 4A-III homolog OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
sp\|Q9VHS8\|IF4A3_DROME	3.2e-183	81.35	Eukaryotic initiation factor 4A-III OS=Drosophila melanogaster OX=7227 GN=CG7483...	[more]

BLAST of Carg11190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9P0\|A0A0A0L9P0_CUCSA	1.9e-220	97.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G654480 PE=4 SV=1	[more]
tr\|A0A1S3CH11\|A0A1S3CH11_CUCME	9.2e-220	98.23	eukaryotic initiation factor 4A-3 OS=Cucumis melo OX=3656 GN=LOC103500360 PE=4 S...	[more]
tr\|A0A067L4G5\|A0A067L4G5_JATCU	1.7e-210	91.46	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24208 PE=4 SV=1	[more]
tr\|A0A2C9W2H3\|A0A2C9W2H3_MANES	1.5e-209	91.22	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G061200 PE=4 SV=...	[more]
tr\|A0A2C9V034\|A0A2C9V034_MANES	5.6e-209	90.73	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G102100 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11190-RA	Carg11190-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 56..253 e-value: 3.8E-52 score: 189.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 68..238 score: 25.737
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 290..371 e-value: 7.6E-34 score: 128.4
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 263..371 e-value: 3.4E-31 score: 107.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 249..410 score: 26.851
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 250..379 e-value: 2.39776E-43 score: 148.54
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 62..224 e-value: 8.2E-41 score: 139.6
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 246..410 e-value: 2.8E-61 score: 207.6
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 27..245 e-value: 5.4E-65 score: 220.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 22..409
None	No IPR available	PANTHER	PTHR24031:SF57	EUKARYOTIC INITIATION FACTOR 4A-III	coord: 22..409
None	No IPR available	CDD	cd00268	DEADc	coord: 39..239 e-value: 2.83655E-90 score: 273.206
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 37..65 score: 10.865
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 105..393

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11190	Cla017314	Watermelon (97103) v1	carwmB0816
Carg11190	Csa3G654480	Cucumber (Chinese Long) v2	carcuB0830
Carg11190	MELO3C024028	Melon (DHL92) v3.5.1	carmeB0811
Carg11190	ClCG10G011910	Watermelon (Charleston Gray)	carwcgB0792
Carg11190	CSPI03G29070	Wild cucumber (PI 183967)	carcpiB0851
Carg11190	Cucsa.192340	Cucumber (Gy14) v1	carcgyB0930
Carg11190	CmaCh01G002560	Cucurbita maxima (Rimu)	carcmaB1134
Carg11190	CmaCh14G009660	Cucurbita maxima (Rimu)	carcmaB1132
Carg11190	CmoCh01G002660	Cucurbita moschata (Rifu)	carcmoB1105
Carg11190	CmoCh14G009890	Cucurbita moschata (Rifu)	carcmoB1102
Carg11190	Lsi03G011620	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11190	Cp4.1LG02g15800	Cucurbita pepo (Zucchini)	carcpeB1146
Carg11190	Cp4.1LG03g04800	Cucurbita pepo (Zucchini)	carcpeB1147
Carg11190	CsGy3G026940	Cucumber (Gy14) v2	carcgybB0803
Carg11190	MELO3C024028.2	Melon (DHL92) v3.6.1	carmedB0822
Carg11190	CsaV3_3G031460	Cucumber (Chinese Long) v3	carcucB0854
Carg11190	Cla97C10G194710	Watermelon (97103) v2	carwmbB0851
Carg11190	Bhi11G001108	Wax gourd	carwgoB0952

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11190	Carg07350	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11190	Watermelon (97103) v2	carwmbB0852
Carg11190	Wax gourd	carwgoB0951
Carg11190	Wax gourd	carwgoB0953
Carg11190	Silver-seed gourd	carcarB133
Carg11190	Silver-seed gourd	carcarB454
Carg11190	Cucumber (Gy14) v2	carcgybB0802
Carg11190	Cucumber (Gy14) v2	carcgybB0808
Carg11190	Cucumber (Gy14) v1	carcgyB0929
Carg11190	Cucurbita maxima (Rimu)	carcmaB1133
Carg11190	Cucurbita maxima (Rimu)	carcmaB1136
Carg11190	Cucurbita moschata (Rifu)	carcmoB1103
Carg11190	Cucurbita moschata (Rifu)	carcmoB1107
Carg11190	Cucurbita pepo (Zucchini)	carcpeB1143
Carg11190	Cucurbita pepo (Zucchini)	carcpeB1145
Carg11190	Wild cucumber (PI 183967)	carcpiB0850
Carg11190	Wild cucumber (PI 183967)	carcpiB0855
Carg11190	Cucumber (Chinese Long) v2	carcuB0829
Carg11190	Cucumber (Chinese Long) v2	carcuB0833
Carg11190	Cucumber (Chinese Long) v3	carcucB0853
Carg11190	Cucumber (Chinese Long) v3	carcucB0858
Carg11190	Bottle gourd (USVL1VR-Ls)	carlsiB747
Carg11190	Melon (DHL92) v3.5.1	carmeB0809
Carg11190	Melon (DHL92) v3.6.1	carmedB0820
Carg11190	Watermelon (Charleston Gray)	carwcgB0791