Carg27092 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATGCAACGTGTTCGGCGATCCAATTACATATTCGAGTTTGGAAAGAATGTCGGAATACGTTGGAAAGGAGAAAAGAAGTGAAGATAGGGCATACGTGGCATTACAATTGAAGAATGTTGGAGCAAAAGGTAAGAATGCGCTTGAATACTTGGAGAAGTTGAATGCACAATGGGGAACCGAAGTCTCAACAATGGGCTTAATTTACAACGCTACTGGAAATGCCATAAAGCTTTTGAAAACTCATGATTGGCATGGTTGTATTGGAGCTTCACCTTATCCTATTAGGATTGAAAATGGACAATGGGGTGTGTTTCTACATGTCGATACGGACTCAACAGGCTCAGAAGCTGCTGTTGTATATCGAGGCGAAAACTTGCGTGGTGTAACTACTGATTGGTTTCTATCTTGGTCTAATCCACCATCATATCACCTCACAACAAACAAGGTTTATGCTCAATTCTTAACAACATTTCTCTTTATTTTAAAAATGTTTATACCTTTTTTTTCAAACGAAAATCAATTATGTTTGTGAGATCTCATATGGATTGAAGAGGGGAATGAGTGTCAGCGAGGACGTTGGGCCCTGAAAGGGAGTGACCTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAACATTCTTTATATGGGTGTGGAAACCTCTCACTAACAGACGTGTTTTAAAACCTTGAGAGGACAATATTTGTTAGTAGACTTGAGTTGTTACAAATGGTATCAAAGCTAGACACCGAGCGGTGTGCCAACGAGGACGCTGATCCTCGAAGGGGGTAGACACTGGATGGTGTGTTAGCATGGATGCTGGGAATCGAAGAGGGGTGGACATTGGACGGTGTGCTCGCGAGGATGCTAAGCCCTGA ATGGCATGCAACGTGTTCGGCGATCCAATTACATATTCGAGTTTGGAAAGAATGTCGGAATACGTTGGAAAGGAGAAAAGAAGTGAAGATAGGGCATACGTGGCATTACAATTGAAGAATGTTGGAGCAAAAGGTAAGAATGCGCTTGAATACTTGGAGAAGTTGAATGCACAATGGGGAACCGAAGTCTCAACAATGGGCTTAATTTACAACGCTACTGGAAATGCCATAAAGCTTTTGAAAACTCATGATTGGCATGGTTGTATTGGAGCTTCACCTTATCCTATTAGGATTGAAAATGGACAATGGGGTGTGTTTCTACATGTCGATACGGACTCAACAGGCTCAGAAGCTGCTGTTGTATATCGAGGCGAAAACTTGCGTGGTGTAACTACTGATTGGTTTCTATCTTGGTCTAATCCACCATCATATCACCTCACAACAAACAAGGGGGTAGACACTGGATGGTGTGTTAGCATGGATGCTGGGAATCGAAGAGGGGTGGACATTGGACGGTGTGCTCGCGAGGATGCTAAGCCCTGA ATGGCATGCAACGTGTTCGGCGATCCAATTACATATTCGAGTTTGGAAAGAATGTCGGAATACGTTGGAAAGGAGAAAAGAAGTGAAGATAGGGCATACGTGGCATTACAATTGAAGAATGTTGGAGCAAAAGGTAAGAATGCGCTTGAATACTTGGAGAAGTTGAATGCACAATGGGGAACCGAAGTCTCAACAATGGGCTTAATTTACAACGCTACTGGAAATGCCATAAAGCTTTTGAAAACTCATGATTGGCATGGTTGTATTGGAGCTTCACCTTATCCTATTAGGATTGAAAATGGACAATGGGGTGTGTTTCTACATGTCGATACGGACTCAACAGGCTCAGAAGCTGCTGTTGTATATCGAGGCGAAAACTTGCGTGGTGTAACTACTGATTGGTTTCTATCTTGGTCTAATCCACCATCATATCACCTCACAACAAACAAGGGGGTAGACACTGGATGGTGTGTTAGCATGGATGCTGGGAATCGAAGAGGGGTGGACATTGGACGGTGTGCTCGCGAGGATGCTAAGCCCTGA MACNVFGDPITYSSLERMSEYVGKEKRSEDRAYVALQLKNVGAKGKNALEYLEKLNAQWGTEVSTMGLIYNATGNAIKLLKTHDWHGCIGASPYPIRIENGQWGVFLHVDTDSTGSEAAVVYRGENLRGVTTDWFLSWSNPPSYHLTTNKGVDTGWCVSMDAGNRRGVDIGRCAREDAKP
BLAST of Carg27092 vs. NCBI nr
Match: XP_022961400.1 (23 kDa jasmonate-induced protein-like [Cucurbita moschata] >XP_022961401.1 23 kDa jasmonate-induced protein-like [Cucurbita moschata]) HSP 1 Score: 313.5 bits (802), Expect = 4.5e-82 Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0
BLAST of Carg27092 vs. NCBI nr
Match: XP_022968787.1 (23 kDa jasmonate-induced protein-like [Cucurbita maxima]) HSP 1 Score: 305.8 bits (782), Expect = 9.5e-80 Identity = 147/169 (86.98%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Carg27092 vs. NCBI nr
Match: XP_023546464.1 (23 kDa jasmonate-induced protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.3 bits (708), Expect = 3.6e-71 Identity = 133/150 (88.67%), Postives = 136/150 (90.67%), Query Frame = 0
BLAST of Carg27092 vs. NCBI nr
Match: AIS71930.1 (23 kDa jasmonate-induced protein [Citrullus lanatus]) HSP 1 Score: 176.8 bits (447), Expect = 6.6e-41 Identity = 86/143 (60.14%), Postives = 99/143 (69.23%), Query Frame = 0
BLAST of Carg27092 vs. NCBI nr
Match: KGN66612.1 (hypothetical protein Csa_1G642550 [Cucumis sativus]) HSP 1 Score: 170.2 bits (430), Expect = 6.2e-39 Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 0
BLAST of Carg27092 vs. Swiss-Prot
Match: sp|P32024|JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.1e-22 Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 0
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A097BU21|A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.4e-41 Identity = 86/143 (60.14%), Postives = 99/143 (69.23%), Query Frame = 0
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A0A0M0F4|A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G642550 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39 Identity = 82/147 (55.78%), Postives = 102/147 (69.39%), Query Frame = 0
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A1Q3B2V5|A0A1Q3B2V5_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05749 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36 Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 0
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A1S3B9I3|A0A1S3B9I3_CUCME (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.6e-35 Identity = 76/143 (53.15%), Postives = 94/143 (65.73%), Query Frame = 0
BLAST of Carg27092 vs. TrEMBL
Match: tr|A0A2R6RBE7|A0A2R6RBE7_ACTCH (Jasmonate-induced protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc09429 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33 Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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