Carg08561-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08561-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Trehalase
Location	Cucurbita_argyrosperma_scaffold_022 : 1048451 .. 1049215 (-)
Sequence length	649

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGTAGTACTGAATCTTTAGGAACTGTTTGGTTTACATGCACAACACTCAAACCTTTCATATCTGTACACAACAAAAGGGATTTCCCGAATGGTTGGGCGCCAATTCAGCACATGATCATCGAGGGACTGGCGAGATCGGAGTTGAAAGAAGCAAGGGTATTGGCTGAGGATATGGCCGTGAGATGGCTTCGAACCAACTATGTGGCTTACAAGAAAACAGGGTATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTCGGCGCAGGAGGTGAATATGTCCCTCAGGTACATCACTCATCAACTTGCATTGGCATTTCTCTCTTCCACTCATTTGAATCATTAAGAAAAGAAAGTGTTCCTCTGCTGATCTGTTTCCTTTTGGTTCCTATGTTTGAGTGTAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCCGAAGATCAAAATATTGACTGCTAATTGACTAGACCACGGTGTACATGTTCGAGAGTGACTTTGGAATTGCCTAACTTGACTTTTACGATGACCCACATGACTAAACTACTTTTAGCCATAGATTCATTGAAGAGTTTGGAGGTGATTTTGAAAGATGTTTAGAAAATTAGAGAGACGAGCCCCGTGGTTGGACGAGCCTCCATGTTAATGTAAAGATTAAGGAGTAAATATATATTAGATCCGTATTATACAATTCACACGATATCAAAATGAATGTAACGTCTTTCTAATA

mRNA sequence

ATGGTTAGTAGTACTGAATCTTTAGGAACTGTTTGGTTTACATGCACAACACTCAAACCTTTCATATCTGTACACAACAAAAGGGATTTCCCGAATGGTTGGGCGCCAATTCAGCACATGATCATCGAGGGACTGGCGAGATCGGAGTTGAAAGAAGCAAGGGTATTGGCTGAGGATATGGCCGTGAGATGGCTTCGAACCAACTATGTGGCTTACAAGAAAACAGGGTATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTCGGCGCAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCCGAAGATCAAAATATTGACTGCTAATTGACTAGACCACGGTGTACATGTTCGAGAGTGACTTTGGAATTGCCTAACTTGACTTTTACGATGACCCACATGACTAAACTACTTTTAGCCATAGATTCATTGAAGAGTTTGGAGGTGATTTTGAAAGATGTTTAGAAAATTAGAGAGACGAGCCCCGTGGTTGGACGAGCCTCCATGTTAATGTAAAGATTAAGGAGTAAATATATATTAGATCCGTATTATACAATTCACACGATATCAAAATGAATGTAACGTCTTTCTAATA

Coding sequence (CDS)

ATGGTTAGTAGTACTGAATCTTTAGGAACTGTTTGGTTTACATGCACAACACTCAAACCTTTCATATCTGTACACAACAAAAGGGATTTCCCGAATGGTTGGGCGCCAATTCAGCACATGATCATCGAGGGACTGGCGAGATCGGAGTTGAAAGAAGCAAGGGTATTGGCTGAGGATATGGCCGTGAGATGGCTTCGAACCAACTATGTGGCTTACAAGAAAACAGGGTATATGCATGAGAAATATGATGTCCAAAAGTGTGGAGACTTCGGCGCAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCAAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCCGAAGATCAAAATATTGACTGCTAA

Protein sequence

MVSSTESLGTVWFTCTTLKPFISVHNKRDFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCGDFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC

Homology

[Close]

BLAST of Carg08561-RA vs. NCBI nr
Match: XP_022958464.1 (probable trehalase [Cucurbita moschata])

HSP 1 Score: 216.5 bits (550), Expect = 5.3e-53
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG
Sbjct: 503 DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 562

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC
Sbjct: 563 DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 600

[Close]

BLAST of Carg08561-RA vs. NCBI nr
Match: XP_023534407.1 (probable trehalase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.5 bits (550), Expect = 5.3e-53
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG
Sbjct: 503 DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 562

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC
Sbjct: 563 DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 600

[Close]

BLAST of Carg08561-RA vs. NCBI nr
Match: XP_022995786.1 (probable trehalase [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 6.9e-53
Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG
Sbjct: 502 DFPNGWAPIQHMIVEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 561

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC
Sbjct: 562 DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 599

[Close]

BLAST of Carg08561-RA vs. NCBI nr
Match: XP_022145919.1 (probable trehalase [Momordica charantia])

HSP 1 Score: 200.7 bits (509), Expect = 3.0e-48
Identity = 87/98 (88.78%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARS LKEAR LAED+A++WLRTNYVAYK TGYMHEKYDV+KCG
Sbjct: 498 DFPNGWAPIQHMIVEGLARSGLKEARALAEDIAMKWLRTNYVAYKNTGYMHEKYDVEKCG 557

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           DFG GGEY+PQTGFGWSNGVVLAFLEEFGWP DQNIDC
Sbjct: 558 DFGGGGEYIPQTGFGWSNGVVLAFLEEFGWPADQNIDC 595

[Close]

BLAST of Carg08561-RA vs. NCBI nr
Match: XP_008437392.1 (PREDICTED: probable trehalase [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARSEL EA+ LAED+A RWLRTNYVAYK TG+MHEKYDVQKCG
Sbjct: 500 DFPNGWAPIQHMIVEGLARSELPEAKALAEDIAARWLRTNYVAYKHTGFMHEKYDVQKCG 559

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           DFG GGEYVPQTGFGWSNGVVLAFLEEFGWP+DQ IDC
Sbjct: 560 DFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPKDQKIDC 597

[Close]

BLAST of Carg08561-RA vs. TAIR10
Match: AT4G24040.1 (trehalase 1)

HSP 1 Score: 144.4 bits (363), Expect = 4.6e-35
Identity = 60/97 (61.86%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           D PNGWAP Q MI+ GL RS +KEA+ +AED+A RW+++NY+ YKK+G +HEK  V + G
Sbjct: 529 DSPNGWAPQQEMIVTGLGRSSVKEAKEMAEDIARRWIKSNYLVYKKSGTIHEKLKVTELG 588

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNID 126
           ++G GGEY+PQTGFGWSNGV+LAFLEE+GWP   +I+
Sbjct: 589 EYGGGGEYMPQTGFGWSNGVILAFLEEYGWPSHLSIE 625

[Close]

BLAST of Carg08561-RA vs. Swiss-Prot
Match: sp|Q9FWC1|TRE_ORYSJ (Probable trehalase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0521000 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-40
Identity = 72/98 (73.47%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAP+QH+I+EGL RS   EAR LAED+A RW+RTNY AYK TG MHEKYDV  CG
Sbjct: 466 DFPNGWAPLQHLIVEGLLRSGSGEARELAEDIATRWVRTNYDAYKATGAMHEKYDVVTCG 525

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
             G GGEY PQTGFGWSNGV+L+FL+EFGWP+D+ IDC
Sbjct: 526 KSGGGGEYKPQTGFGWSNGVILSFLDEFGWPQDKKIDC 563

[Close]

BLAST of Carg08561-RA vs. Swiss-Prot
Match: sp|Q9SU50|TRE1_ARATH (Trehalase OS=Arabidopsis thaliana OX=3702 GN=TRE1 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.4e-34
Identity = 60/97 (61.86%), Postives = 79/97 (81.44%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           D PNGWAP Q MI+ GL RS +KEA+ +AED+A RW+++NY+ YKK+G +HEK  V + G
Sbjct: 529 DSPNGWAPQQEMIVTGLGRSSVKEAKEMAEDIARRWIKSNYLVYKKSGTIHEKLKVTELG 588

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNID 126
           ++G GGEY+PQTGFGWSNGV+LAFLEE+GWP   +I+
Sbjct: 589 EYGGGGEYMPQTGFGWSNGVILAFLEEYGWPSHLSIE 625

[Close]

BLAST of Carg08561-RA vs. Swiss-Prot
Match: sp|O43280|TREA_HUMAN (Trehalase OS=Homo sapiens OX=9606 GN=TREH PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 5.6e-22
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPN WAP+Q ++I GLA++ L+ A+ +A  +A  W+RTN+  Y +   M+EKYDV   G
Sbjct: 463 DFPNAWAPLQDLVIRGLAKAPLRRAQEVAFQLAQNWIRTNFDVYSQKSAMYEKYDVSNGG 522

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFG 118
             G GGEY  Q GFGW+NGVVL  L+ +G
Sbjct: 523 QPGGGGEYEVQEGFGWTNGVVLMLLDRYG 551

[Close]

BLAST of Carg08561-RA vs. Swiss-Prot
Match: sp|Q8MMG9|TREA_PIMHY (Trehalase OS=Pimpla hypochondriaca OX=135724 GN=tre1 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-21
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           D PN W P+Q +I++ L  S  + A  LA+++A+RWLR N+  Y ++G M EKYD    G
Sbjct: 484 DLPNAWPPLQSIIVQALRNSNEESAEKLAKELAIRWLRANHKGYSQSGQMFEKYDALNPG 543

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEF 117
            FG GGEYV Q GFGW+NGVV  FL  +
Sbjct: 544 KFGGGGEYVVQEGFGWTNGVVYEFLNSY 571

[Close]

BLAST of Carg08561-RA vs. Swiss-Prot
Match: sp|P32359|TREA_TENMO (Trehalase OS=Tenebrio molitor OX=7067 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-21
Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           D+PN W P+Q +I+ GL +S    A+ LA ++A RW++ N + +++TG M EKY+V+  G
Sbjct: 465 DYPNAWPPMQSIIVMGLDKSGSYRAKQLARELARRWVKANLIGFRQTGEMFEKYNVEVPG 524

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEF 117
             G GGEYV Q+GFGW+NGVVL F+ +F
Sbjct: 525 QNGGGGEYVVQSGFGWTNGVVLEFINQF 552

[Close]

BLAST of Carg08561-RA vs. TrEMBL
Match: tr|A0A1S3ATK4|A0A1S3ATK4_CUCME (Trehalase OS=Cucumis melo OX=3656 GN=LOC103482823 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.6e-48
Identity = 87/98 (88.78%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARSEL EA+ LAED+A RWLRTNYVAYK TG+MHEKYDVQKCG
Sbjct: 500 DFPNGWAPIQHMIVEGLARSELPEAKALAEDIAARWLRTNYVAYKHTGFMHEKYDVQKCG 559

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           DFG GGEYVPQTGFGWSNGVVLAFLEEFGWP+DQ IDC
Sbjct: 560 DFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPKDQKIDC 597

[Close]

BLAST of Carg08561-RA vs. TrEMBL
Match: tr|A0A0A0KMF2|A0A0A0KMF2_CUCSA (Trehalase OS=Cucumis sativus OX=3659 GN=Csa_5G149880 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.9e-47
Identity = 86/98 (87.76%), Postives = 91/98 (92.86%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARSEL EA+ LAED+A RWLRTNYVAYK TG+MHEKYDVQKCG
Sbjct: 500 DFPNGWAPIQHMIVEGLARSELPEAKALAEDIAARWLRTNYVAYKHTGFMHEKYDVQKCG 559

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
            FG GGEYVPQTGFGWSNGVVLAFLEEFGWP+DQ IDC
Sbjct: 560 GFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPKDQKIDC 597

[Close]

BLAST of Carg08561-RA vs. TrEMBL
Match: tr|A0A251P7H0|A0A251P7H0_PRUPE (Trehalase OS=Prunus persica OX=3760 GN=PRUPE_5G126300 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 82/98 (83.67%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARS LKEA+++AED+AVRW+RTNYVAYKKTG MHEKYDV+KCG
Sbjct: 499 DFPNGWAPIQHMIVEGLARSGLKEAKLVAEDIAVRWIRTNYVAYKKTGTMHEKYDVEKCG 558

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
            FG GGEY+PQTGFGWSNGVVLAFLEEFGWP+D+ I+C
Sbjct: 559 AFGGGGEYIPQTGFGWSNGVVLAFLEEFGWPQDRRINC 596

[Close]

BLAST of Carg08561-RA vs. TrEMBL
Match: tr|M5WD65|M5WD65_PRUPE (Trehalase OS=Prunus persica OX=3760 GN=PRUPE_ppa003514mg PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 82/98 (83.67%), Postives = 93/98 (94.90%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARS LKEA+++AED+AVRW+RTNYVAYKKTG MHEKYDV+KCG
Sbjct: 471 DFPNGWAPIQHMIVEGLARSGLKEAKLVAEDIAVRWIRTNYVAYKKTGTMHEKYDVEKCG 530

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
            FG GGEY+PQTGFGWSNGVVLAFLEEFGWP+D+ I+C
Sbjct: 531 AFGGGGEYIPQTGFGWSNGVVLAFLEEFGWPQDRRINC 568

[Close]

BLAST of Carg08561-RA vs. TrEMBL
Match: tr|A0A2P4JTA5|A0A2P4JTA5_QUESU (Trehalase OS=Quercus suber OX=58331 GN=CFP56_54802 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.6e-45
Identity = 82/98 (83.67%), Postives = 92/98 (93.88%), Query Frame = 0


Query: 29  DFPNGWAPIQHMIIEGLARSELKEARVLAEDMAVRWLRTNYVAYKKTGYMHEKYDVQKCG 88
           DFPNGWAPIQHMI+EGLARS  KEAR +AED+A+RW+RTNYVAYKKTG MHEKY+V+KCG
Sbjct: 145 DFPNGWAPIQHMIVEGLARSGSKEARTVAEDIAMRWIRTNYVAYKKTGKMHEKYNVEKCG 204

Query: 89  DFGAGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQNIDC 127
           +FG GG+YVPQTGFGWSNGVVLAFLEEFGWP+DQ IDC
Sbjct: 205 EFGGGGKYVPQTGFGWSNGVVLAFLEEFGWPQDQMIDC 242

The following BLAST results are available for this feature:

BLAST of Carg08561-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958464.1	5.3e-53	100.00	probable trehalase [Cucurbita moschata]	[more]
XP_023534407.1	5.3e-53	100.00	probable trehalase [Cucurbita pepo subsp. pepo]	[more]
XP_022995786.1	6.9e-53	98.98	probable trehalase [Cucurbita maxima]	[more]
XP_022145919.1	3.0e-48	88.78	probable trehalase [Momordica charantia]	[more]
XP_008437392.1	1.1e-47	88.78	PREDICTED: probable trehalase [Cucumis melo]	[more]

BLAST of Carg08561-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24040.1	4.6e-35	61.86	trehalase 1	[more]

BLAST of Carg08561-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FWC1\|TRE_ORYSJ	1.2e-40	73.47	Probable trehalase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0521000 PE=2...	[more]
sp\|Q9SU50\|TRE1_ARATH	8.4e-34	61.86	Trehalase OS=Arabidopsis thaliana OX=3702 GN=TRE1 PE=2 SV=1	[more]
sp\|O43280\|TREA_HUMAN	5.6e-22	50.56	Trehalase OS=Homo sapiens OX=9606 GN=TREH PE=1 SV=2	[more]
sp\|Q8MMG9\|TREA_PIMHY	1.6e-21	50.00	Trehalase OS=Pimpla hypochondriaca OX=135724 GN=tre1 PE=1 SV=1	[more]
sp\|P32359\|TREA_TENMO	4.8e-21	48.86	Trehalase OS=Tenebrio molitor OX=7067 PE=2 SV=1	[more]

BLAST of Carg08561-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ATK4\|A0A1S3ATK4_CUCME	7.6e-48	88.78	Trehalase OS=Cucumis melo OX=3656 GN=LOC103482823 PE=3 SV=1	[more]
tr\|A0A0A0KMF2\|A0A0A0KMF2_CUCSA	4.9e-47	87.76	Trehalase OS=Cucumis sativus OX=3659 GN=Csa_5G149880 PE=3 SV=1	[more]
tr\|A0A251P7H0\|A0A251P7H0_PRUPE	1.6e-45	83.67	Trehalase OS=Prunus persica OX=3760 GN=PRUPE_5G126300 PE=3 SV=1	[more]
tr\|M5WD65\|M5WD65_PRUPE	1.6e-45	83.67	Trehalase OS=Prunus persica OX=3760 GN=PRUPE_ppa003514mg PE=3 SV=1	[more]
tr\|A0A2P4JTA5\|A0A2P4JTA5_QUESU	4.6e-45	83.67	Trehalase OS=Quercus suber OX=58331 GN=CFP56_54802 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004555	alpha,alpha-trehalase activity
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005991	trehalose metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR008928	6-hairpin_glycosidase_sf
IPR001661	Glyco_hydro_37
IPR012341	6hp_glycosidase-like_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005991	trehalose metabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004555	alpha,alpha-trehalase activity
molecular_function	GO:0003824	catalytic activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg08561	Carg08561	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08561-RA.three_prime_UTR.1	Carg08561-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08561-RA.CDS.2	Carg08561-RA.CDS.2	CDS
Carg08561-RA.CDS.1	Carg08561-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg08561-RA.exon.2	Carg08561-RA.exon.2	exon
Carg08561-RA.exon.1	Carg08561-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg08561-RA	Carg08561-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012341	Six-hairpin glycosidase-like superfamily	GENE3D	G3DSA:1.50.10.10		coord: 3..125 e-value: 8.7E-33 score: 115.6
IPR001661	Glycoside hydrolase, family 37	PFAM	PF01204	Trehalase	coord: 29..117 e-value: 1.1E-33 score: 116.8
IPR001661	Glycoside hydrolase, family 37	PANTHER	PTHR23403	TREHALASE	coord: 27..124
None	No IPR available	PANTHER	PTHR23403:SF1	TREHALASE	coord: 27..124
IPR008928	Six-hairpin glycosidase superfamily	SUPERFAMILY	SSF48208	Six-hairpin glycosidases	coord: 29..119