Carg16201 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGGTGAACCGGGGAGCTATCCAACGCTTCCCTTTACTTATCCTCTCGCCTCCATTTTTACGCCTTAGACTGACTTTCTGCTGCAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCCGCCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGTCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGCAAGTCCTTCCAGCCTTCTGCTCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGGGCTTCTGTAAGTGTTGCATCTCTCACTATGCCCTTGTTTTGCGGCGTTTCACTCTTTTAGTGAAGTTTGAAATTCGTAATTTTCGTTTTGTTTTCCTTCTGCTTCTTGTTTGGTTTTTCTTTCTGAAGTCCGAATGCATTTAATAGGATGTTTTGTTTTCCCTAATTTTGGTTAATTATGCAGTGATCAATGGGGCATTTTATTCGTATATATTTGGATATTGGCGGCAACAGTTAGCCATTTCTTTTGTTCTCCGACTGCATTATGCCAAAATTTTGGAAATCGAACTTATTATTCCCTCAATGTCGCCTTTTCAAATACCTTTTCTGAAAACTTCTCCTGTCTTCGTTATGTTCTTTGAATTTTTCTTCACGTACTCAGATTATTGATTCAGTCATGCAGGGGTGAGTTTAAACAGTTTGTATCTATTAGAATTTTCATGTATATTGTATATGTAACTTTTGATATTTGTTCGTGCAAGGCAGAAATCAGCATCTTGTAACTCAAAATATGAACATGCGAGTTATTTCTTTTGAGGGTTCCACTTCTGACGTTGTGTTCCATTATTTGTTTTTACAGAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGATCAGGAATTTATCAAGGTAATTCTCCATGGCTTAGGTTTTGGATACTGCTTATTCCTCTGTGTTGTCATCTGACTGTATTAGTGCAATGATTTTTGGAGTAGAATTACAGTAAGCCTATAAAAGGTTTGGTTAAAGATTATGTGCAAGTTTCAAAGGTTTACCGTTCGGATTGCATCGTCTTCACATTTGATCTAAAGTGTTACGATTTCAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGGTTTGTTGCACTAAACTATCCCAAATTGAAGCTCAGCAAATATTGTCTTGAGCTGCTTTGAACTTGTGTTTATTTTACCTCCTATTTTGTAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCAGTTGACAGTGTTGTAAGTAGATACTTGCTTCTCTTGTTCAACAAAGTTATACTTTTGCAAAAAAGTTTTGTGTCAATGAAATTCTGCTTCTATTCCTCAAAATGTGGTAGTTTGTTCTTTGAGATTCCACATCAATTGGAGAGAGGAACGAGTGCCAGCAAAGACGCTGGGGCTCGAAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAACGAAATATTCTTTATAAAGGTGTGGAAACCTCGCCCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCTCAAAGAGAACAATATCGGCTAGCGGTGGGCTTGAGCTGTTACAATTTTGGATGTGATTGTGATGATACTAAATAGAACCTTTTTGCAGTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAATATCCATTGGTTTCTGATGTCACTAAATCAATTTCAAAATCTTATGGTGCATCTAACAATAAGAAGATTGTTTATCAAGAGTTGTTGTTCATAATTTCCTTGTCTTTGATGTTGCAGGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCCGCCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGTCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGCAAGTCCTTCCAGCCTTCTGCTCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGGGCTTCTAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGATCAGGAATTTATCAAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCAGTTGACAGTGTTTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAATATCCATTGGTTTCTGATGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA ATGGATATTTCCAGGATTGCCCCCAAGTGTGTGGAGCTTCCAGCTTCCTCCTCCGCTATGGCTTGCTCCGCCGCCGCCGCCACCGCCACCGCCCTCTTCTCCTCCAACCCCTCCGCTTTTCCAGTCAAGTCCAATGCTCCCACTGCTTCCGCCCCCTCCTCTCGAAACCTAGCACTCCCCAAATCTTTCGTCGGCCTTCGCAAGTCCTTCCAGCCTTCTGCTCCTCGTTCAATTTCCTCCTCCCGTGGAGCTAGGTCCAGACGGAGCTTTGCTGTCCGGGCTTCTAGTGAGTTGCCATTGGTTGGAAATGTAGCACCAGATTTTGAGGCTGAGGCAGTTTTTGATCAGGAATTTATCAAGGTTAAACTTTCTGAGTACATTGGGAAGAAATATGTGATTCTCTTTTTCTACCCATTGGATTTTACGTTTGTTTGCCCCACAGAGATTACTGCTTTCAGTGATCGGTATGAAGAATTTAAGGAGCTAAACACAGAAGTTTTGGGTGTTTCAGTTGACAGTGTTTTCTCACATCTTGCTTGGGTCCAAACTGATAGAAAGTCTGGTGGGCTTGGTGATCTTCAATATCCATTGGTTTCTGATGCGTTGCAATACGTGCAAGAGAACCCCGACGAAGTTTGCCCAGCGGGATGGAAACCCGGCGAGAAATCGATGAAGCCAGACCCCAAGGGTAGCAAAGAGTACTTTTCTGCTATTGCTTAA MDISRIAPKCVELPASSSAMACSAAAATATALFSSNPSAFPVKSNAPTASAPSSRNLALPKSFVGLRKSFQPSAPRSISSSRGARSRRSFAVRASSELPLVGNVAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFKELNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLQYPLVSDALQYVQENPDEVCPAGWKPGEKSMKPDPKGSKEYFSAIA
BLAST of Carg16201 vs. NCBI nr
Match: XP_022940528.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 383.3 bits (983), Expect = 6.2e-103 Identity = 207/262 (79.01%), Postives = 207/262 (79.01%), Query Frame = 0
BLAST of Carg16201 vs. NCBI nr
Match: XP_023540867.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.2 bits (975), Expect = 5.3e-102 Identity = 206/262 (78.63%), Postives = 206/262 (78.63%), Query Frame = 0
BLAST of Carg16201 vs. NCBI nr
Match: XP_023005651.1 (2-Cys peroxiredoxin BAS1, chloroplastic [Cucurbita maxima]) HSP 1 Score: 379.4 bits (973), Expect = 9.0e-102 Identity = 206/262 (78.63%), Postives = 206/262 (78.63%), Query Frame = 0
BLAST of Carg16201 vs. NCBI nr
Match: XP_022983071.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 364.0 bits (933), Expect = 3.9e-97 Identity = 196/262 (74.81%), Postives = 200/262 (76.34%), Query Frame = 0
BLAST of Carg16201 vs. NCBI nr
Match: XP_022934750.1 (2-Cys peroxiredoxin BAS1, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 360.9 bits (925), Expect = 3.3e-96 Identity = 195/262 (74.43%), Postives = 199/262 (75.95%), Query Frame = 0
BLAST of Carg16201 vs. TAIR10
Match: AT3G11630.1 (Thioredoxin superfamily protein) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-72 Identity = 155/261 (59.39%), Postives = 172/261 (65.90%), Query Frame = 0
BLAST of Carg16201 vs. TAIR10
Match: AT5G06290.1 (2-cysteine peroxiredoxin B) HSP 1 Score: 266.2 bits (679), Expect = 2.0e-71 Identity = 146/217 (67.28%), Postives = 156/217 (71.89%), Query Frame = 0
BLAST of Carg16201 vs. TAIR10
Match: AT3G26060.2 (Thioredoxin superfamily protein) HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04 Identity = 31/96 (32.29%), Postives = 46/96 (47.92%), Query Frame = 0
BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q96291|BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BAS1 PE=1 SV=2) HSP 1 Score: 270.4 bits (690), Expect = 1.9e-71 Identity = 155/261 (59.39%), Postives = 172/261 (65.90%), Query Frame = 0
BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q9C5R8|BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g06290 PE=2 SV=3) HSP 1 Score: 266.2 bits (679), Expect = 3.6e-70 Identity = 146/217 (67.28%), Postives = 156/217 (71.89%), Query Frame = 0
BLAST of Carg16201 vs. Swiss-Prot
Match: sp|O24364|BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea OX=3562 GN=BAS1 PE=2 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 2.6e-68 Identity = 153/261 (58.62%), Postives = 169/261 (64.75%), Query Frame = 0
BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q6ER94|BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=BAS1 PE=1 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 5.4e-66 Identity = 149/266 (56.02%), Postives = 170/266 (63.91%), Query Frame = 0
BLAST of Carg16201 vs. Swiss-Prot
Match: sp|Q96468|BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare OX=4513 GN=BAS1 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 5.1e-64 Identity = 132/207 (63.77%), Postives = 145/207 (70.05%), Query Frame = 0
BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A0A0LB09|A0A0A0LB09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778410 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.6e-94 Identity = 192/264 (72.73%), Postives = 199/264 (75.38%), Query Frame = 0
BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A1S3B6V4|A0A1S3B6V4_CUCME (2-Cys peroxiredoxin BAS1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103486662 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 7.0e-87 Identity = 181/265 (68.30%), Postives = 187/265 (70.57%), Query Frame = 0
BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A2I4H513|A0A2I4H513_9ROSI (2-Cys peroxiredoxin BAS1, chloroplastic OS=Juglans regia OX=51240 GN=LOC109013543 PE=4 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 4.3e-84 Identity = 171/261 (65.52%), Postives = 190/261 (72.80%), Query Frame = 0
BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A2I4E114|A0A2I4E114_9ROSI (2-Cys peroxiredoxin BAS1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108985296 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 3.2e-79 Identity = 166/261 (63.60%), Postives = 183/261 (70.11%), Query Frame = 0
BLAST of Carg16201 vs. TrEMBL
Match: tr|A0A1R3IIY7|A0A1R3IIY7_COCAP (Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant OS=Corchorus capsularis OX=210143 GN=CCACVL1_11925 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.2e-78 Identity = 167/261 (63.98%), Postives = 179/261 (68.58%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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