Carg00451 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTATTCGAGGAAGTTCAGGGGAGTTAGGCAGCGGCAGTGGGGCTCGTGGGTGTCAGAAATCCGCCACCCATTGCTGTAAAATCCCCTTTTCATTACGTTTTTTTGGTTCTTCTGCTATAAATATATGCGCCGTTGATCGGGTTTGTTGGTTTAAAAATGCTCTGTATAACCATTTTTTGTCTGGCGCCCATAAACTGTTTGATGATTTGCCTGAAAGAGACCTGGCGGTGGCGCCATGGATTTTTAAACCTCATTGTTGTTGTAAATATGTGTGTTCTTGCTTGTGTTGTTTTGGTTCAGAAATGCTCTGAAATCCCATGTTTTGTCTGGCGCCCATAACCTGTTTGATGATTTGCCTGAAAGAGACCTGGCGATGGCGGCATGGATTTTTAAACTTCATTGTTGTTGTAAATATGCGTGTTATTGCTTGTGTTGTTTTGGTTCACAAAAGCTCTGAAATCCCATGTTTTGTCTGGTGCCCATAACCTGTTTGTTGATATGACTGAAAGAAGCTGAGCGGCCATGGCGTTGGCATGCGTATCTATGTGTTCTTGGTTGTGATTTGGAACTACATTACATCATGAGCGCACATCCTTATATTGTTCATGTGTTTTTCTTTGTAGGAAAAGAAGGGTGTGGCTAGGGACATTCGACACCGCAGAGGATGCAGCACGAGCATATGATCAAGCATCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAAGACCGATCTGAAGAAGCCAGCCATGGCCATGGGGCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGGAAGTGCTGCAAGAACCCTTCTCCCTCCTTGACATGCCTGCGACTCGACAGTGACAATGCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCACTCGAGCAGCCTCCGATTGGGTCATGAGGATTGAGTTAGGAAAGAAGGAGACACCGTCGCCGTCGATGTCCCTGTCCCCGTTGCCCGAACCTGCAAGCCAGGAAGCTGAAGGCCGCCAAAATGGGATTGATGAAGAAGACAGAATTGCAATGCAAATGATCGAAGAGTTGCTGAGTTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAG ATGGTTTATTCGAGGAAGTTCAGGGGAGTTAGGCAGCGGCAGTGGGGCTCGTGGGTGTCAGAAATCCGCCACCCATTGCTGAAAAGAAGGGTGTGGCTAGGGACATTCGACACCGCAGAGGATGCAGCACGAGCATATGATCAAGCATCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAAGACCGATCTGAAGAAGCCAGCCATGGCCATGGGGCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGGAAGTGCTGCAAGAACCCTTCTCCCTCCTTGACATGCCTGCGACTCGACAGTGACAATGCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCACTCGAGCAGCCTCCGATTGGGTCATGAGGATTGAGTTAGGAAAGAAGGAGACACCGTCGCCGTCGATGTCCCTGTCCCCGTTGCCCGAACCTGCAAGCCAGGAAGCTGAAGGCCGCCAAAATGGGATTGATGAAGAAGACAGAATTGCAATGCAAATGATCGAAGAGTTGCTGAGTTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAG ATGGTTTATTCGAGGAAGTTCAGGGGAGTTAGGCAGCGGCAGTGGGGCTCGTGGGTGTCAGAAATCCGCCACCCATTGCTGAAAAGAAGGGTGTGGCTAGGGACATTCGACACCGCAGAGGATGCAGCACGAGCATATGATCAAGCATCCATCTTGATGAACGGCCAAAACGCCAAGACCAATTTCCCTGCATCGAAAGACCGATCTGAAGAAGCCAGCCATGGCCATGGGGCTTCTCCATTGTCCCCAAAAGCACTTTCAGAGCTACTCAGCACAAAGCTCAGGAAGTGCTGCAAGAACCCTTCTCCCTCCTTGACATGCCTGCGACTCGACAGTGACAATGCCCACATCGGCGTCTGGCAGAAGCGTGCAGGCACTCGAGCAGCCTCCGATTGGGTCATGAGGATTGAGTTAGGAAAGAAGGAGACACCGTCGCCGTCGATGTCCCTGTCCCCGTTGCCCGAACCTGCAAGCCAGGAAGCTGAAGGCCGCCAAAATGGGATTGATGAAGAAGACAGAATTGCAATGCAAATGATCGAAGAGTTGCTGAGTTGGAACTGCCCTCTTCCTTCAACTTCAAGCTAG MVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQASILMNGQNAKTNFPASKDRSEEASHGHGASPLSPKALSELLSTKLRKCCKNPSPSLTCLRLDSDNAHIGVWQKRAGTRAASDWVMRIELGKKETPSPSMSLSPLPEPASQEAEGRQNGIDEEDRIAMQMIEELLSWNCPLPSTSS
BLAST of Carg00451 vs. NCBI nr
Match: XP_022940113.1 (ethylene-responsive transcription factor SHINE 2-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 391.7 bits (1005), Expect = 1.4e-105 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Carg00451 vs. NCBI nr
Match: XP_022981248.1 (ethylene-responsive transcription factor SHINE 2-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 386.7 bits (992), Expect = 4.6e-104 Identity = 191/194 (98.45%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Carg00451 vs. NCBI nr
Match: XP_023524391.1 (ethylene-responsive transcription factor SHINE 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382.1 bits (980), Expect = 1.1e-102 Identity = 190/194 (97.94%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Carg00451 vs. NCBI nr
Match: XP_022936544.1 (ethylene-responsive transcription factor SHINE 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 348.2 bits (892), Expect = 1.8e-92 Identity = 171/194 (88.14%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Carg00451 vs. NCBI nr
Match: XP_022936545.1 (ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936547.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936548.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata] >XP_022936549.1 ethylene-responsive transcription factor SHINE 2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 348.2 bits (892), Expect = 1.8e-92 Identity = 171/194 (88.14%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Carg00451 vs. TAIR10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 228.8 bits (582), Expect = 2.9e-60 Identity = 114/188 (60.64%), Postives = 142/188 (75.53%), Query Frame = 0
BLAST of Carg00451 vs. TAIR10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 220.3 bits (560), Expect = 1.0e-57 Identity = 116/189 (61.38%), Postives = 141/189 (74.60%), Query Frame = 0
BLAST of Carg00451 vs. TAIR10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 202.6 bits (514), Expect = 2.2e-52 Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 0
BLAST of Carg00451 vs. TAIR10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 108.2 bits (269), Expect = 5.7e-24 Identity = 57/94 (60.64%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Carg00451 vs. TAIR10
Match: AT4G11140.1 (cytokinin response factor 1) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-17 Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Carg00451 vs. Swiss-Prot
Match: sp|Q3E958|SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.2e-59 Identity = 114/188 (60.64%), Postives = 142/188 (75.53%), Query Frame = 0
BLAST of Carg00451 vs. Swiss-Prot
Match: sp|Q9LFN7|SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.8e-56 Identity = 116/189 (61.38%), Postives = 141/189 (74.60%), Query Frame = 0
BLAST of Carg00451 vs. Swiss-Prot
Match: sp|Q9XI33|WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 4.0e-51 Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 0
BLAST of Carg00451 vs. Swiss-Prot
Match: sp|Q94AW5|ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-22 Identity = 57/94 (60.64%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Carg00451 vs. Swiss-Prot
Match: sp|P16146|PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Carg00451 vs. TrEMBL
Match: tr|A0A1S3CR71|A0A1S3CR71_CUCME (ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo OX=3656 GN=LOC103503822 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 8.0e-89 Identity = 168/196 (85.71%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of Carg00451 vs. TrEMBL
Match: tr|A0A0A0LJA8|A0A0A0LJA8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878210 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 3.1e-85 Identity = 161/194 (82.99%), Postives = 166/194 (85.57%), Query Frame = 0
BLAST of Carg00451 vs. TrEMBL
Match: tr|A0A2I4ES46|A0A2I4ES46_9ROSI (ethylene-responsive transcription factor SHINE 3-like OS=Juglans regia OX=51240 GN=LOC108992195 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 4.4e-71 Identity = 142/191 (74.35%), Postives = 159/191 (83.25%), Query Frame = 0
BLAST of Carg00451 vs. TrEMBL
Match: tr|A0A1U8NKZ9|A0A1U8NKZ9_GOSHI (ethylene-responsive transcription factor SHINE 2-like OS=Gossypium hirsutum OX=3635 GN=LOC107949342 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.4e-69 Identity = 135/196 (68.88%), Postives = 158/196 (80.61%), Query Frame = 0
BLAST of Carg00451 vs. TrEMBL
Match: tr|A0A0D2PK81|A0A0D2PK81_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G292600 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.4e-69 Identity = 135/196 (68.88%), Postives = 158/196 (80.61%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |