Carg26483 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CATTTTTTCGTCCCCCTCAATCCCCCATTTATGTCTCTCAAAAACCCTCTTGGAGGTTTCGGTTTCGGTTTCAGTCATGGAAGAACAAGGCACGGCTATAATTTTAGCCAGAGCCACGGAGCTGAGGCTGAAGATCAGGGGCTCTGTTAACAACACCACGAGTTCGCCGGAAACTGACATTCGGGATGATCGGTTCGCTGTGGATGAAAATAATGGCGTCGGTTCGAGTGGGGAGGCGGAGGAAGAAGATGAGGAATCGGTGAGGCTTTTGAAAATCTGCGATGCGCTTGCGTCTCTTGAGAATCAGCTCTCTTCATTGCAGGTTTCATTTTACCTTTTCTTGTTTGGGAATGAGGATTGAAGAATATGTTTCGATTTAGTCGGCTTTCTTTGGCATTTTTGTTTTAGGATGATGATATTGAAAATTTCTGTGCCGTGTTTGATTTATATATAGACTTGGTTGATTTGATTGTGTTGATCTTGCCCCTCTGTTCCTCCCTTACAATTGAGGGTGTTTTCAAATACTGAATAATTTAGAACACGCAGATTAGTCTAAGGGTCATTGGAGCATGTGAAGAAAAAGTACAAGCAGTCACTTATTTGGAATATTAAAATCTTACCAGTCTTTCAGTGACTGGTTGTTCCCAATGCGATGATTTTGTTGGCAGTGAGATCCCACGTTGGTTGGGGACTATAGGGAAACAAGTGGGAGTGAGGACGCTGGTCCCTAAAGGGGAGTAGATTGTGAGAATGAAACATTGTTTATAAGAATGTGGAAACCTCTACCTAGCATACGTATTTTAAAAACCGTGAGGGGAAGTCCGGAAGTATCTGCTAGTAGTGGGCTTGAGTTGTTAAACATTCCACAAGTCTAGTTGAAATATGTAAAGGCTCATCAAGTTCATGTATAACTATTTCCTCATGTTGGCTATTTAGAATCTTCTCTAAACTCAACAAATAGAGGTGTTCTCAACCCTTGTAAGCAATGACGCAATTATTCAAGCTCCAATTGAGTAAAGTTTAATAGCACTCGATCAAAAGAAGTTTCTGTTCATATCTTCTCCATTGTAATATCTTGCCTACTTTCATTCAATGCCTCCCACAGGTGCATCGTTACGACTGTGGTACTCGAGTAAAAAAATGAATCGGGAGTATGATTCTCTCTAAATTTGAACATCTTATTTCATTTATTTGCTAATACAAGTATCTGGCAGTTGTAACTGGTGGTCTTAGTGTTTCAGGTTATGCAACGTATGGGGTTGCTAAAACCTTCAATGTCCCTCGTTGCTGGCATGTGTATTGATATTGCTCAGATCTGTCTTTCAATAAGTCAGTATGAGTTATTTACCAAACTGTTACTCGTTCTGATATGTCTATGCACTTCTCACGTGAGCTTGTTCTCGTTACGATTTACGACTGTATGTGGATTTCTCCTAGGCACTGTTTCTTGTTGTGGCATGAACCATATAGCATTCTGGATTCCATCTTTTTACTCTTGTGTTGTGTATATCTAGTTTATAGGTGTATCAAATGCTCACAAACCTGGCTCTTAACTTTCAAATGATTCTAGTGTAAATGCTAAACATCTAGGGGAGATTGCCTATATCGTTTTATTATTCAATCCTATCCGATGCCTTGTGGTGTACCTGAATGACATACTAATTTGGAGGGCGTTAGTTTAGATAGCTTGTTTGGTTTATTGAAGCATTTGTTGTATGTCCTACTCATATAGAACGGTCATTCTTGCCATATACGGAGAACAGACGAAGGGGAGCCACTTGAACTCCCTCTCCATCCCAGGCCTCACCTAAAATCTCCCTAAAGCTAGAAGGGATCGATATTGACTCACTTATTTATCAAAATCTTCCGCCCCATTGAAAAGATTCTATATATTTATAATCCAATAAGTACAAGGAGAGTGAGGATAGGTTTCCCTCCACCAAAGCATCTATTAGGACCAACCAGCAAGCTCACCAATTGGTTTGCTCTTCCTCTTGGCTTAACTCAAACACCTGCAACAGAAGTTAATTGATTTCTTAATTAACTAGTATTCAGGCACCGTTATGAGATCATATCTAGTAATCAAGGTTTGCCTCGATTTGGTACAGCTCTCGCGGCCCATACCGAAATAGTGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAATGCATTTAAGGGAGAACCAGCTAGCTTTAGGTTCGAGTAGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCATCCAAGCTTCATTCTGGTTATGGATAGATCACCCAGGTTCGGGTCCAGAAGTTAATTGATTTCTTAATTTTGACCCTCCATGTTGTCTCTACCTTCAGCTTGTAGTTTTAGAAGCCATTTTCAACATGAATCTGAAATTAAACAACAATAAAGTTTGTATGTACGTCCAATATAATGGACCTAGAGAGTGCGACGTTTGTAGATAGCATGGGGGGAGTCATAGAACATTGTAATGTACTGGAAGCATGCATTTAAATCTTCTAATACTTCTATCTTATAATTTGCAGGATTTACAACAACGGCAAAGGTACGAGAAAGAAGTAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTGTACTGGATAAGCTGAAGAAGTACGAAGGACAGGATTTGGAAGTGATACATGAGGCTTCAGCTTTTGTTAGGGAGACAGTGCAGCACAACAAGGATTTCACGCTCCCTCCATATCCAAGCCATCCTGATAATCCCTTCCCTTCTGGACACGAGTCCGTGACTAATGGGCTAACGGACGCCACGACAAATATAGCTACAAAGGAACTCACTGAATCAGAAAGAAAACAATCAAAATCGGATTCGAGGAACTCGAGAAACGGATTGGGAACTTTCGCTAGTGTAGCTGCAAAATCAGTGGTTACCGTGGTTGCCATTGTATCCATACTGCACTTCACTGGTCTTACTCCGAAGCTCGCACGGAAAGTTTCATCTTTGAAGGTTTTCAACATTTTTCGACCGTCTGCAGCTGGAAACAATGGATCACACAATGTATGTCCTCCAGTTGAAGCTCATCAGTGCATTGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGCTGTGGTTAAACCAGATGTAAACTATGGAAGGGGGTGA CATTTTTTCGTCCCCCTCAATCCCCCATTTATGTCTCTCAAAAACCCTCTTGGAGGTTTCGGTTTCGGTTTCAGTCATGGAAGAACAAGGCACGGCTATAATTTTAGCCAGAGCCACGGAGCTGAGGCTGAAGATCAGGGGCTCTGTTAACAACACCACGAGTTCGCCGGAAACTGACATTCGGGATGATCGGTTCGCTGTGGATGAAAATAATGGCGTCGGTTCGAGTGGGGAGGCGGAGGAAGAAGATGAGGAATCGGTGAGGCTTTTGAAAATCTGCGATGCGCTTGCGTCTCTTGAGAATCAGCTCTCTTCATTGCAGGATTTACAACAACGGCAAAGGTACGAGAAAGAAGTAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTGTACTGGATAAGCTGAAGAAGTACGAAGGACAGGATTTGGAAGTGATACATGAGGCTTCAGCTTTTGTTAGGGAGACAGTGCAGCACAACAAGGATTTCACGCTCCCTCCATATCCAAGCCATCCTGATAATCCCTTCCCTTCTGGACACGAGTCCGTGACTAATGGGCTAACGGACGCCACGACAAATATAGCTACAAAGGAACTCACTGAATCAGAAAGAAAACAATCAAAATCGGATTCGAGGAACTCGAGAAACGGATTGGGAACTTTCGCTAGTGTAGCTGCAAAATCAGTGGTTACCGTGGTTGCCATTGTATCCATACTGCACTTCACTGGTCTTACTCCGAAGCTCGCACGGAAAGTTTCATCTTTGAAGGTTTTCAACATTTTTCGACCGTCTGCAGCTGGAAACAATGGATCACACAATGTATGTCCTCCAGTTGAAGCTCATCAGTGCATTGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGCTGTGGTTAAACCAGATGTAAACTATGGAAGGGGGTGA ATGGAAGAACAAGGCACGGCTATAATTTTAGCCAGAGCCACGGAGCTGAGGCTGAAGATCAGGGGCTCTGTTAACAACACCACGAGTTCGCCGGAAACTGACATTCGGGATGATCGGTTCGCTGTGGATGAAAATAATGGCGTCGGTTCGAGTGGGGAGGCGGAGGAAGAAGATGAGGAATCGGTGAGGCTTTTGAAAATCTGCGATGCGCTTGCGTCTCTTGAGAATCAGCTCTCTTCATTGCAGGATTTACAACAACGGCAAAGGTACGAGAAAGAAGTAGCCCTTTCCGAGATCGAGCATAGCCGCAAGATTGTACTGGATAAGCTGAAGAAGTACGAAGGACAGGATTTGGAAGTGATACATGAGGCTTCAGCTTTTGTTAGGGAGACAGTGCAGCACAACAAGGATTTCACGCTCCCTCCATATCCAAGCCATCCTGATAATCCCTTCCCTTCTGGACACGAGTCCGTGACTAATGGGCTAACGGACGCCACGACAAATATAGCTACAAAGGAACTCACTGAATCAGAAAGAAAACAATCAAAATCGGATTCGAGGAACTCGAGAAACGGATTGGGAACTTTCGCTAGTGTAGCTGCAAAATCAGTGGTTACCGTGGTTGCCATTGTATCCATACTGCACTTCACTGGTCTTACTCCGAAGCTCGCACGGAAAGTTTCATCTTTGAAGGTTTTCAACATTTTTCGACCGTCTGCAGCTGGAAACAATGGATCACACAATGTATGTCCTCCAGTTGAAGCTCATCAGTGCATTGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGCTGTGGTTAAACCAGATGTAAACTATGGAAGGGGGTGA MEEQGTAIILARATELRLKIRGSVNNTTSSPETDIRDDRFAVDENNGVGSSGEAEEEDEESVRLLKICDALASLENQLSSLQDLQQRQRYEKEVALSEIEHSRKIVLDKLKKYEGQDLEVIHEASAFVRETVQHNKDFTLPPYPSHPDNPFPSGHESVTNGLTDATTNIATKELTESERKQSKSDSRNSRNGLGTFASVAAKSVVTVVAIVSILHFTGLTPKLARKVSSLKVFNIFRPSAAGNNGSHNVCPPVEAHQCIVKERIEVPFSSAVVKPDVNYGRG
BLAST of Carg26483 vs. NCBI nr
Match: XP_022931627.1 (plastid division protein PDV2-like [Cucurbita moschata] >XP_022931628.1 plastid division protein PDV2-like [Cucurbita moschata]) HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Carg26483 vs. NCBI nr
Match: XP_023530122.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo] >XP_023530123.1 plastid division protein PDV2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 417.5 bits (1072), Expect = 3.5e-113 Identity = 274/286 (95.80%), Postives = 277/286 (96.85%), Query Frame = 0
BLAST of Carg26483 vs. NCBI nr
Match: XP_022988871.1 (plastid division protein PDV2-like [Cucurbita maxima] >XP_022988872.1 plastid division protein PDV2-like [Cucurbita maxima]) HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106 Identity = 269/289 (93.08%), Postives = 272/289 (94.12%), Query Frame = 0
BLAST of Carg26483 vs. NCBI nr
Match: XP_023511492.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241.5 bits (615), Expect = 3.4e-60 Identity = 155/302 (51.32%), Postives = 174/302 (57.62%), Query Frame = 0
BLAST of Carg26483 vs. NCBI nr
Match: XP_004137006.1 (PREDICTED: plastid division protein PDV2 [Cucumis sativus] >KGN43982.1 hypothetical protein Csa_7G075620 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 2.7e-57 Identity = 156/302 (51.66%), Postives = 173/302 (57.28%), Query Frame = 0
BLAST of Carg26483 vs. TAIR10
Match: AT2G16070.2 (plastid division2) HSP 1 Score: 145.6 bits (366), Expect = 4.7e-35 Identity = 104/311 (33.44%), Postives = 148/311 (47.59%), Query Frame = 0
BLAST of Carg26483 vs. TAIR10
Match: AT5G53280.1 (plastid division1) HSP 1 Score: 49.3 bits (116), Expect = 4.5e-06 Identity = 36/123 (29.27%), Postives = 66/123 (53.66%), Query Frame = 0
BLAST of Carg26483 vs. Swiss-Prot
Match: sp|Q9XII1|PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 8.4e-34 Identity = 104/311 (33.44%), Postives = 148/311 (47.59%), Query Frame = 0
BLAST of Carg26483 vs. Swiss-Prot
Match: sp|Q9FK13|PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana OX=3702 GN=PDV1 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.2e-05 Identity = 36/123 (29.27%), Postives = 66/123 (53.66%), Query Frame = 0
BLAST of Carg26483 vs. TrEMBL
Match: tr|A0A0A0K6S0|A0A0A0K6S0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075620 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.8e-57 Identity = 156/302 (51.66%), Postives = 173/302 (57.28%), Query Frame = 0
BLAST of Carg26483 vs. TrEMBL
Match: tr|A0A1S4E0D9|A0A1S4E0D9_CUCME (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103495190 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51 Identity = 178/306 (58.17%), Postives = 199/306 (65.03%), Query Frame = 0
BLAST of Carg26483 vs. TrEMBL
Match: tr|A0A067LG18|A0A067LG18_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10048 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 6.4e-39 Identity = 134/324 (41.36%), Postives = 165/324 (50.93%), Query Frame = 0
BLAST of Carg26483 vs. TrEMBL
Match: tr|A0A2C9UFT7|A0A2C9UFT7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G147100 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.4e-38 Identity = 131/324 (40.43%), Postives = 164/324 (50.62%), Query Frame = 0
BLAST of Carg26483 vs. TrEMBL
Match: tr|B9RZD8|B9RZD8_RICCO (Non-symbiotic hemoglobin, putative OS=Ricinus communis OX=3988 GN=RCOM_0938370 PE=3 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 3.2e-38 Identity = 120/323 (37.15%), Postives = 154/323 (47.68%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |