Carg20525 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGTAAGTTATACAGTTCAAAACTGTTGGTTTCTTTTTTTGTTACATGTTCTGATGTGTAATCATGACCTTTATTTCTTTAGAATGCATATAGCACGTGAAGTAGTCAAGAAATCTCTCTGAATTGTATTGCTTGTATTGCTTGGTTTTTGTTTTTTTTGTTTTTTTTGCTTTTTGCTGTTTTGTTGGGTATATGTCTGAAGAGAAACGATATAATTTTTAGAGGGGTGGAGAGATTTTGGAGGATGATAATGTTTGAAGAGGTTGCTAGGTTTAATACTTCTTATGAGCGTTCATCCGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAATTATCAACTTGGTTTGGTTCTTTTGAATTGGAATCTCTTCTTGTAGTTAGTTTTGAGATTCCTTTTGTGAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATGCCATTGTACATTCTTTCATTCTTCTCAATAAAAGCTTGATTTCTTACCCAAAAATAAAAAATAAAAAAACAATAATAAAAAGAATAAAAAATGCAAGAAGTCTGGCGAAAACCAGAAAGCTTCTGTCTGGACTAATGACCGTAATTAAAAGAACCTACTGTCCCCTTTCAAATTCCTTTTAAGCAATCGTGAGACTGTTTTTGTGAACATTTTTATTTATATTGATTGAGCATTTACCATTTTCATATTTCCAATAGTAGCTATGTTAGTTGTTACCATCTGAAGATGCCATTTAACCAAAAACCAAAATATTTGCAGTTGGCAATGGATGAAGTTTTAAGATATTCCTGTCAATAATAATACTATGATTACTATCATTGTGATAAATTAAAATAGGAAACATCTAATTTCTGATTTCATTAATCCAGGATGTTCATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGGTGAGTATTTTGATATATCTATTATGAATTATTGAACACATTAGATTCTGCAGCATGACACATGCCTCCATCTGCATAATAGAACTAAATACAGAAATTGTATACATGCGAACGACATATGGCGCTTTTACTTAACTCCATTGAAGGCAAAGAAGCGTACGTGATGGCTAATGGAGATTTACCAACCATCAGCAGTACATCCTGCGTCCAATAGGGATTTAATGATCTTATATTGACTGGTTGATTATTTCGGTTCTCGTTCTATTCTTCATCATTCTCATTAATAGCTCACTCCCCTTGGAATGATTAATAGGGTGCTACATATGAAATTACATTAAGCTGATGGTATCATGTGTGGTGAAACTATTGGAACATGAAACTATATGCAAACCTTGGTTCTCATTTTGAATTTTAAATACAAAAAATTGTTGACTATTATATATGTGCAGAACAAAGAATTTCGAACACGGTATCCCGAGGTCTGTTCTCATTAGTTTTCATTGTTTTTTTACAGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAGCTAAGCACTATGCCATGGTTGATGCTGTCCATCCAAATGTTGGAATAAGATAGATCTGAAACTAAAAAAAACGTCATATGTGGCTCTGGAAGGTGGTTCCAAGAATGATGGAGTGTTGGATGGGATAGGTTCTTGTGTGCTTCCTCTGTTACATTATGTTTTTATAATTATGTTTATGTTACTTTGGTGATGTCTAAGCAGTTTCCCTAGTTTGTGAATTGAAGTACTTAAAAACTATTTAAGAGCAAGTCTGCAGATCTGTGGGCAAGTTCCTGTTCCTCATTTGCAGGACTCTCAAAAAGTTTGTAAAGTTATTGGTTATCAAACTGTGTTGCTTGAATGCTCTGTTGTAAACTTTCTTCTCTTTGACTTGATTCCTTCAAATCCTACTACTACTACCTGAATGTTCTTCTAGTTTTACCAAATACATTTTTTC ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGATGTTCATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAGCTAAGCACTATGCCATGGTTGATGCTGTCCATCCAAATGTTGGAATAAGATAGATCTGAAACTAAAAAAAACGTCATATGTGGCTCTGGAAGGTGGTTCCAAGAATGATGGAGTGTTGGATGGGATAGGTTCTTGTGTGCTTCCTCTGTTACATTATGTTTTTATAATTATGTTTATGTTACTTTGGTGATGTCTAAGCAGTTTCCCTAGTTTGTGAATTGAAGTACTTAAAAACTATTTAAGAGCAAGTCTGCAGATCTGTGGGCAAGTTCCTGTTCCTCATTTGCAGGACTCTCAAAAAGTTTGTAAAGTTATTGGTTATCAAACTGTGTTGCTTGAATGCTCTGTTGTAAACTTTCTTCTCTTTGACTTGATTCCTTCAAATCCTACTACTACTACCTGAATGTTCTTCTAGTTTTACCAAATACATTTTTTC ATGAGTGAGAGCAAGCTGAAAGATCTTCTTCATGGCTCAGAATATGTTCTAACATACGAAGATAAAGATGCTGACTGGATGCTCGTTGGTGATGTCCCCTGGGAGATGTTCATCGACTCTTGTAAGAGGCTGAGGATTATGAAGAGCTCAGATGCAATTGGACTGGCTCCTAGGGCGGTGGAGAAGTGCCGGAACAGGAAATAG MSESKLKDLLHGSEYVLTYEDKDADWMLVGDVPWEMFIDSCKRLRIMKSSDAIGLAPRAVEKCRNRK
BLAST of Carg20525 vs. NCBI nr
Match: XP_022951336.1 (auxin-responsive protein IAA9-like [Cucurbita moschata] >XP_022951337.1 auxin-responsive protein IAA9-like [Cucurbita moschata] >XP_022951338.1 auxin-responsive protein IAA9-like [Cucurbita moschata]) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Carg20525 vs. NCBI nr
Match: XP_023002083.1 (auxin-responsive protein IAA9-like [Cucurbita maxima] >XP_023002084.1 auxin-responsive protein IAA9-like [Cucurbita maxima] >XP_023002085.1 auxin-responsive protein IAA9-like [Cucurbita maxima]) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Carg20525 vs. NCBI nr
Match: XP_023537439.1 (auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo] >XP_023537440.1 auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo] >XP_023537441.1 auxin-responsive protein IAA9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Carg20525 vs. NCBI nr
Match: XP_008444965.1 (PREDICTED: auxin-responsive protein IAA9-like [Cucumis melo]) HSP 1 Score: 138.3 bits (347), Expect = 9.7e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Carg20525 vs. NCBI nr
Match: NP_001267710.1 (auxin-responsive protein IAA9-like [Cucumis sativus] >BAA85821.1 Aux/IAA protein [Cucumis sativus] >KGN62776.1 hypothetical protein Csa_2G372720 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 9.7e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Carg20525 vs. TAIR10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16) HSP 1 Score: 120.9 bits (302), Expect = 2.9e-28 Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Carg20525 vs. TAIR10
Match: AT4G29080.1 (phytochrome-associated protein 2) HSP 1 Score: 117.9 bits (294), Expect = 2.5e-27 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Carg20525 vs. TAIR10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8) HSP 1 Score: 112.8 bits (281), Expect = 8.0e-26 Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Carg20525 vs. TAIR10
Match: AT3G23050.1 (indole-3-acetic acid 7) HSP 1 Score: 111.3 bits (277), Expect = 2.3e-25 Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Carg20525 vs. TAIR10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14) HSP 1 Score: 110.5 bits (275), Expect = 3.9e-25 Identity = 50/66 (75.76%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|P0C132|IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 4.0e-27 Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|O24407|IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 5.3e-27 Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|Q9ZSY8|IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 4.5e-26 Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|Q38826|IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.4e-24 Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Carg20525 vs. Swiss-Prot
Match: sp|Q38825|IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 4.2e-24 Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Carg20525 vs. TrEMBL
Match: tr|Q9SSY2|Q9SSY2_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=CsIAA2 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.4e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A1S3BBL3|A0A1S3BBL3_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103488149 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.4e-30 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A1U8B3T8|A0A1U8B3T8_NELNU (Auxin-responsive protein OS=Nelumbo nucifera OX=4432 GN=LOC104610541 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.1e-29 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A251LD14|A0A251LD14_MANES (Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_05G187100 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.1e-29 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of Carg20525 vs. TrEMBL
Match: tr|A0A251IQY1|A0A251IQY1_MANES (Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_18G054900 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 7.1e-29 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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