Carg27002 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTGAATCGTGGACTGCTCGTCTTTCTTCTGCTTCCAAGCGCTACCAATCTGCTCTTCTATCACGATCTGGTTTAGGTGCATCTTATTTTTCTTTCTTTGTTTCATCGTTTACTGACTTTCCAGTGATTTGGAACTCCCCGTTTTTCCAATTGCTTTTCTGATGATCACGACTGAACTTTTCCCGTACACTTATGTTATTTGTTACCTCAAATCTACTTTTTCTCTCTGAAAACGTTGCCATTTGCGGATAAAAGGGAAAAACAGATGATGATGATGATGATCAAAACAATTAAAGTTATCCAAATTGAGCTTGTGTTGATTTTTTTTTTCTTTTTCTTTTTTTCTCTTTTTTCTAAGTATGGTGAAAGTGTCAAGTGAGATCAAAGACTTGAATTTCGATTGTGCCTTGATCTCTAGGATTCCGCATACGCTGATTAAGGGGTTGATCAAGTAAGGAATGTTGGATGATGGAAGTCCCACGTCGACTAATTTAGGGAATGATCATGGGTTTATAAACAAAGAATACTCTCTTCATTGGGAATACTCTCTCCATTGGGATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGATCTTCGTCTACATGGTATCAGAGCCATGCCCTAAACTTTATTGCGATGCCAATAGAATGGTTAATCCTCAACATCGAACAAGGCTCTAAAAGAAAAAGGAGGTAAACCTCCCTCGAAGGCAGTAAAAAATGACTAAGACTCAAAGGAGTCGAGCATCGATTAGGGCGCGGCAAGGCGCGCACATTTGGTTCGAGAGTGGAGGTGTGAGATGATGAAGGCCCCACGTCGGCTAATTTAGGGAATGATCAAGGGGGTTGTATAAACAAGTGTTCGTCTAACAAGGAATACATCTCCATTGGCATGAGGCCTTTTGGTAAACCAAAAGCAAAGTGATGGGAGCTTAGGCTCAAAGTGGACAATATGATACCATTGTGGAGGGTCCCTAACGGTGTTGAGATATGGATAACATTTCGATCTTTTCATGCCATCTCCTTTTTCCTTACTTGAGGCTTTATTTTTAACTAGATAATTACGGTTGGACGTTTTGATGTGTTATTTTTCTCGAGAAATTGAGTAGATGTTTAAGATGCATTAGTACAAGAAATACTTCGTAGAGTCTGCTTTGTGTATCTTGAAAAATATGGTCACTGAATTTTGTAAGAAAAGAAGTACGTTGGTTATCTAGATTCTTTGGCTGGCTTCTGAAAATGGCCATCAGTAAGATAACGATGTGTTGAACTTAAGATTTTGTTATTAAGACACAGTGCATCTGACTTTCTGCTGTAAATCATTATAACATTTGCTGCTTCAACTTGTTTTAGATTATCATTTGTATGTGTTGGTGCTTTTATGATCCTTTTGCCTTCACCCTCTGTGTTGGACTCATTCTATAGTAGCTCAACATTCTTCAGGTATGTTCATGGGGTTTGAAGAACTTGAAGGGGATGATGATATAAGGGAGGAGTTCCCATGCCCATTTTGCTCGGAATTTTTTGATATAGTCGGATTGTGCTGTCACATTGATGAAGAGCATCCTATTGAGGCAAGGAATGGGGTATGGATCCTTGCAAAACCGTTTTGTTGCATATTTCCCTTCTCCTCTGGATTCACGTCTAATTTTTGATGAGCTTATATTGATGATATATCATATGATAGCGAGCTTAATACCACTCACATATCCTAACGTTTTTTTTTTTCGTTCTTTCAACTGAGAAGACATCCCCTTCTTTTCCCTTGATGTAGTCCAATATTCTGTAGTATATGAAGACAGCTTGTCCATCTCAAATGTTTAGGGCCCTCGCCTTCTTTTCCCTTAATTTCCCCTGCCACCAACTACTTGGGACTTAAAAAAATCAAGAAACTGTACTTGTAAACCAGTAATCAGGACAGCTCTGATAGAATTCATAAGAAAAACCCTTTTGCTCGCCGCTGTCGAATTCGTACGGAGGATATAGATCACCTATTCTTGTATTGTCCATTTACTCCCCTTGCTGGTGGCTCTTTAAGATATTTGGAATAAAAGGGTGTTTTGTAGAACCATATCTCGTACAATCGTTCATGGTCCTCTCTTTAGAAATAAAGCAAGCGTATTACAGGGGAATGCACCCTAGGTTATTCGTCGGAAAGCTGGTCTGGAAATTTTCTAGGGGATTGAGAGGATGAGACGAAGTCTATTGAGAGTTATTTATCAAATATATTCATCATGGAGATATAATTTTGATATCGGTGCTGTTGTCACTCGTCTCCTTGTTCAGTATGTCTTCATTTTAGCCAACAGTGAATTCCTTAGTGTTCATGGTGCAGTGTATAATGCTATTCATCATAAGTCTCATAAACGATAGCTTCGATAATTTAAGATTGAAATATTATTATTCTGCAGGTGTGTCCAGTCTGTGACATGAGAGTGGGAGTTGACATGGTTGCGCATATATCCCTGCAGCATGGAAATATTTTCAAGATATCCTTCTATTTATCATGTTAAAATTAATTTCCATCTTTTCTTTTTTTAACATTCTATGATTTTTCCCTCATTGAGATTGCTTCACATTCATGCTCTTCATGTAGTTTTGTTCTTTAAAGATCAGGTTGGTGTGTGCACCTAGCTTTGTGTGTTCATAAAGGTGGCTCACACTCGACACTCTCTTTGTTGAGGAAAGAGCTTCAAGAAGGAAATTTGCAGTCTCTCTTTGGGGGTTCTTCATGTTTATTTACCTCGAATGCAGCGCCCGATCCATTGCTGTCATCGTTTATTCTACCGATGGCTGATGACTATGGCAGTGTTCAACCTCACTTGTCGGTTGAATCAAACTCCATGAAGTGTAATTCACAAGACAAATCATTAGAACGGTATGTTACTGACATATTCCTACTATTACATCACAATTTATCTCGCAAGTTCTTTAGTGCACATGGTCATGCCCAAGATAGTATCTCTTTTGTCGAGGAACGAGTTCTTATTACTGTTTTGTGTAGGCTGACATTCATTTTTCTTTAAATCCGTGGCATCGTGAATAAATACTCTTTGGTCATCTTGTCATTTCGAGTCTAGTTGGTGTGGGACTAGCTTTAGTAGACATGGAAACAGAACATTAAGTACATGTACCAAAATCATGGCCATCATTTGAATACTTCTCCATTAATGGATCTAAAATCATGGTTGTATGTGACAGGAGCATCCCGTCATCGCCTCTGTCCGTGCAGGACGAGGAAGAGAAAAGAAAACGCTGTGCATTTGTGCAAGGGCTG ATGGATGCTGAATCGTGGACTGCTCGTCTTTCTTCTGCTTCCAAGCGCTACCAATCTGCTCTTCTATCACGATCTGGTTTAGGTATGTTCATGGGGTTTGAAGAACTTGAAGGGGATGATGATATAAGGGAGGAGTTCCCATGCCCATTTTGCTCGGAATTTTTTGATATAGTCGGATTGTGCTGTCACATTGATGAAGAGCATCCTATTGAGGCAAGGAATGGGGTGTGTCCAGTCTGTGACATGAGAGTGGGAGTTGACATGGTTGCGCATATATCCCTGCAGCATGGAAATATTTTCAAGATATCCTTCTATTTATCATATTGCTTCACATTCATGCTCTTCATATCAGGTTGGTGTGTGCACCTAGCTTTGTGTGTTCATAAAGGTGGCTCACACTCGACACTCTCTTTGTTGAGGAAAGAGCTTCAAGAAGGAAATTTGCAGTCTCTCTTTGGGGGTTCTTCATGTTTATTTACCTCGAATGCAGCGCCCGATCCATTGCTGTCATCGTTTATTCTACCGATGGCTGATGACTATGGCAGTGTTCAACCTCACTTGTCGGTTGAATCAAACTCCATGAAGTGTAATTCACAAGACAAATCATTAGAACGGAGCATCCCGTCATCGCCTCTGTCCGTGCAGGACGAGGAAGAGAAAAGAAAACGCTGTGCATTTGTGCAAGGGCTG ATGGATGCTGAATCGTGGACTGCTCGTCTTTCTTCTGCTTCCAAGCGCTACCAATCTGCTCTTCTATCACGATCTGGTTTAGGTATGTTCATGGGGTTTGAAGAACTTGAAGGGGATGATGATATAAGGGAGGAGTTCCCATGCCCATTTTGCTCGGAATTTTTTGATATAGTCGGATTGTGCTGTCACATTGATGAAGAGCATCCTATTGAGGCAAGGAATGGGGTGTGTCCAGTCTGTGACATGAGAGTGGGAGTTGACATGGTTGCGCATATATCCCTGCAGCATGGAAATATTTTCAAGATATCCTTCTATTTATCATATTGCTTCACATTCATGCTCTTCATATCAGGTTGGTGTGTGCACCTAGCTTTGTGTGTTCATAAAGGTGGCTCACACTCGACACTCTCTTTGTTGAGGAAAGAGCTTCAAGAAGGAAATTTGCAGTCTCTCTTTGGGGGTTCTTCATGTTTATTTACCTCGAATGCAGCGCCCGATCCATTGCTGTCATCGTTTATTCTACCGATGGCTGATGACTATGGCAGTGTTCAACCTCACTTGTCGGTTGAATCAAACTCCATGAAGTGTAATTCACAAGACAAATCATTAGAACGGAGCATCCCGTCATCGCCTCTGTCCGTGCAGGACGAGGAAGAGAAAAGAAAACGCTGTGCATTTGTGCAAGGGCTG MDAESWTARLSSASKRYQSALLSRSGLGMFMGFEELEGDDDIREEFPCPFCSEFFDIVGLCCHIDEEHPIEARNGVCPVCDMRVGVDMVAHISLQHGNIFKISFYLSYCFTFMLFISGWCVHLALCVHKGGSHSTLSLLRKELQEGNLQSLFGGSSCLFTSNAAPDPLLSSFILPMADDYGSVQPHLSVESNSMKCNSQDKSLERSIPSSPLSVQDEEEKRKRCAFVQGL
BLAST of Carg27002 vs. NCBI nr
Match: XP_022961504.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 396.4 bits (1017), Expect = 6.8e-107 Identity = 202/230 (87.83%), Postives = 203/230 (88.26%), Query Frame = 0
BLAST of Carg27002 vs. NCBI nr
Match: XP_022968785.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 394.4 bits (1012), Expect = 2.6e-106 Identity = 200/230 (86.96%), Postives = 202/230 (87.83%), Query Frame = 0
BLAST of Carg27002 vs. NCBI nr
Match: XP_022961503.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 390.2 bits (1001), Expect = 4.9e-105 Identity = 202/235 (85.96%), Postives = 203/235 (86.38%), Query Frame = 0
BLAST of Carg27002 vs. NCBI nr
Match: XP_022968784.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 388.3 bits (996), Expect = 1.9e-104 Identity = 200/235 (85.11%), Postives = 202/235 (85.96%), Query Frame = 0
BLAST of Carg27002 vs. NCBI nr
Match: XP_023516688.1 (protein DEHYDRATION-INDUCED 19 homolog 3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 388.3 bits (996), Expect = 1.9e-104 Identity = 199/230 (86.52%), Postives = 200/230 (86.96%), Query Frame = 0
BLAST of Carg27002 vs. TAIR10
Match: AT3G05700.1 (Drought-responsive family protein) HSP 1 Score: 218.0 bits (554), Expect = 6.0e-57 Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 0
BLAST of Carg27002 vs. TAIR10
Match: AT5G26990.1 (Drought-responsive family protein) HSP 1 Score: 214.5 bits (545), Expect = 6.7e-56 Identity = 110/233 (47.21%), Postives = 153/233 (65.67%), Query Frame = 0
BLAST of Carg27002 vs. TAIR10
Match: AT1G56280.1 (drought-induced 19) HSP 1 Score: 169.1 bits (427), Expect = 3.2e-42 Identity = 100/225 (44.44%), Postives = 132/225 (58.67%), Query Frame = 0
BLAST of Carg27002 vs. TAIR10
Match: AT5G49230.1 (Drought-responsive family protein) HSP 1 Score: 157.9 bits (398), Expect = 7.4e-39 Identity = 99/235 (42.13%), Postives = 134/235 (57.02%), Query Frame = 0
BLAST of Carg27002 vs. TAIR10
Match: AT3G06760.2 (Drought-responsive family protein) HSP 1 Score: 134.8 bits (338), Expect = 6.7e-32 Identity = 100/226 (44.25%), Postives = 130/226 (57.52%), Query Frame = 0
BLAST of Carg27002 vs. Swiss-Prot
Match: sp|Q84J70|DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=DI19-3 PE=1 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.1e-55 Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 0
BLAST of Carg27002 vs. Swiss-Prot
Match: sp|Q6NM26|DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=DI19-6 PE=1 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.2e-54 Identity = 110/233 (47.21%), Postives = 153/233 (65.67%), Query Frame = 0
BLAST of Carg27002 vs. Swiss-Prot
Match: sp|Q39083|DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana OX=3702 GN=DI19-1 PE=1 SV=2) HSP 1 Score: 183.3 bits (464), Expect = 3.0e-45 Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 0
BLAST of Carg27002 vs. Swiss-Prot
Match: sp|Q8VXU6|DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.7e-43 Identity = 105/223 (47.09%), Postives = 135/223 (60.54%), Query Frame = 0
BLAST of Carg27002 vs. Swiss-Prot
Match: sp|Q9FJ17|DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=DI19-7 PE=1 SV=2) HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37 Identity = 99/235 (42.13%), Postives = 134/235 (57.02%), Query Frame = 0
BLAST of Carg27002 vs. TrEMBL
Match: tr|A0A1S4DYC1|A0A1S4DYC1_CUCME (protein DEHYDRATION-INDUCED 19 homolog 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492131 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 1.7e-98 Identity = 188/231 (81.39%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of Carg27002 vs. TrEMBL
Match: tr|A0A0A0LYE5|A0A0A0LYE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568580 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 1.7e-98 Identity = 188/231 (81.39%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of Carg27002 vs. TrEMBL
Match: tr|A0A1S3BPJ9|A0A1S3BPJ9_CUCME (protein DEHYDRATION-INDUCED 19 homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492131 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 9.4e-97 Identity = 188/235 (80.00%), Postives = 198/235 (84.26%), Query Frame = 0
BLAST of Carg27002 vs. TrEMBL
Match: tr|A0A1S4DZ34|A0A1S4DZ34_CUCME (protein DEHYDRATION-INDUCED 19 homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492131 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 1.2e-96 Identity = 188/236 (79.66%), Postives = 198/236 (83.90%), Query Frame = 0
BLAST of Carg27002 vs. TrEMBL
Match: tr|A0A2P6R7D6|A0A2P6R7D6_ROSCH (Putative drought induced 19 type, zinc-binding protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0456671 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.7e-82 Identity = 163/232 (70.26%), Postives = 190/232 (81.90%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |