Carg12107 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAATCTTCGTTCGGAGAGCCTTTCAATCGCGCTCATTATCGCCATGGGCGTCTTCTTCCACTCCTCAGATTTTCTCCTCCCTTCTTCTACTTCTTCTCCGGCCGGCCACCCACCTTCTTCGACCTACGCCCTTGTTCTGCTCAACCAAAGCCTCCCCAAATTCACTCCTCTGCTCTGGAAGCACGGTTACTCTTCAAATCCCTTTTGGCTTCATCTTTTGGTTCTAGGTTTTGATGATTTTTGCGTTTCGTGTTGATGCGTTCTTATGTGGGTTGTTGTAGAGCAGCAAAACTTCGTCTCTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCAAGACGCTACGGATATTCGAAATAGGTTCGTTTCGTTGCGATTTTCTTCTTTTTCTTATCGTTTTTAGCGTGCATTTATGCCATTATCAGTGTTTTTCTTTTCTTTTTCTTTTCTTGTTGTGATTTAGCTTCTCTATTTAGTAATGGAGTTTCGCGCATAGGGGTTTTGTTGTTTTCTGGTAATTTAGATGGTTAATGCGTGAAAACATAAATCTTCTCCTTGGATGTTACTTCACAGTTTTATTTACCATTGACTGTTATGACGAACTCTTAGGGTTTATTATGGCCCCTTTCGTTACGAATTTGAATTATGTTTTATATTTTTTTGAAAACTGTTTTGGGATTCTTTGATTCAAATTGTGAATATTCTAAAATTTTTTTAACGTTTTCAATGTAGAATTTGGAATCTTAAAATGAAGAATTATATACTATTATAGTCTGATGATTAGTTTTAATTTGGTACTTTTAGGTGTTTTTTTTTTTTTTTTTTTTTTTGGATGCCAATTCAATGCCTCCAAGAAATGGGTTGAGTAAATGTTCTTTGAAAGTCGTTTTTCTTATTTCGGTTAGTGTTTTCTTTACTATTTTGGAAAATTTTCTTTCTTTAATTATCATGGACTTGTGGTTAGTGTTCTTATGTGCAAAGTAATCTTAATTTTTACAAATTACTCGACAATTCTGAAGAATAATCTTCTTTTCACAAAAAAAGAAAAAGAAACACTGACCCCAAGTTTCAAGATGTGATTGATACTAACAAAACAAATACTAGTGGCTAGCTAAAGAAGAAAATTTTGTTGCCATTGATGTCTTCATAATCATTTTCGAGCATTTATTGATAGTTTATACTATTGTTGTACAATGAATAAACTGTTCTAGAATTATATATCTTATGTTTTAAGTGATCTGGACTGTTCATTCATTCCTATCTATTGATTTTTTTTTCTTTTTTCTATTGCCAGCTATAAGCCAGATGTTATTAGAGGAGATATGGATTCAATTCGGACAGAAGTACTAGATTTTTATGCTAAGCAAGTACGTTACTAAGCCACCCCCTCCCTTCGAAGAATGTGGGGCTTTTTTAAATGATTTTTCAAGTGTTTGATACCATGGATGGTTCCATCTTGTGCATTTGATACCATGGATGGTTCCATCTTGTGCATTTGAGACCATGGATGGTTCCATCTTGTGCGTAATTTTTCCATTCTATGTTTTGATAAAGTTCACTTGCATTACATGTTGTATTTTACTATGCTGTTATCATGTATGGATTGCGGGCTCAAGATATCCATATTCACATGGTGCAGGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAATCTATGCCAAATCAGGAGGAGTCTAATGTAGGTTGGATCATGATGTAAATCTTAAGTGGCTTGTTTATTAAACTAGAAGTTTTGGATGTTCGCATTCAACTACTGCGTTTTGTTTTGTGCGCTGACTTTTCAGATTGGGATTATAATGTTTGAGTTGTTGATTTTCAGCTGTGCATACTTGTTGCTGGAGCTCTAGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCTACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTATTCATCTTCTGCCAAGGACTCATCACCATGAAATCCATGTTCACTCATCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCCTCTGGACGCACTACGACCACTGGTCTCCAATGGGATTTGAGTAAGTACTGTCCTCATTCCTCTTTCTGGATCTAATGCTCTGTTTATTTTCAAAGAATGAACGACTGCGTTGTGTTATATGTTCTTATGTGCATCCTATCCTGTTTATGCTTGGTTTTAAGCAATTTTGAGTTGGAAAATGAGCTGACAATGTGATCCATCAGTTTTATTCCTCTTGCTATGAGTTCATTCTTAACTTCATGTTTCAAAAAAAAACTTTGCAAGGAATTGGTCAATGCCAGCAGCTTTATGCTCAATTTCTTAAGCTTTTTTAGGAATTCCAAAACAAACAACTTCAACATAATCTTTCTGTAACACCGATCCAAGCCCACCACTAGCAGATATTGTCTTCTTTGGGCTTTCCCTCAAGATTTTTAAAACGTCTATGTTAGGGAGTGGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCCCCCAACCGATATGGGATCTCACAATCCACCCTCTTTCAAGGCTCAGTGTCCTTGTTGACAATTGTTCCCTTTTCCAATCAATGTGGGACCCCCAATCCACCCCCTTTGGGACCCGGCGTCCTTACTGGTACACTGCCTTGTGTCTACCTTCTTTCGAGGCTCAGCATCTTCCTCGCACATCTGCTTCCCTTAAGGTTTTTAAAGAATGTTTCCTTTCGAGGCTCAGCATTTGTAACGGCCCAAGTCCACCGCTTCCCTTAATCTTTTTAAAACGCATCTGCTAGGAAGAGGTTTCCATTCCACACCCTTACAAAGAATGCTTTATTCTCCTTCCCAACCTTCATCTTGTGATATTTTGAGAAGGTACTGTGGAAATAATTCATGTCTAACCTCATGAAGATTTCTTTCCAGATAGTCATTCGTTACTTCATTCTCTCCCTATGTGATTGTACTTTGGCATGATATTCCTTCAAGTTGTATGCTTACAATATTAGGGGATGTTGTACTTTCTTTTTCGATTCGTACTCTGCTCTTCCAGCTCCTATTTGCTCTTTCTCGACTGTTTTAGGGAAGTTTTTTTTTAATATACTTCGGGCACGTTTGGGAATGATTTTGAAACGGCGACAAATCACTTTTGTCATGTCTTTTAGTTATTTTGGGCTGTCTTAAAATCACTCCGAACATATCCTTATGGAATTCTAACGTGTGCTGTTAACCATTTTGGTATGAATGTGTATTCCAGCTGATACAGAGATGAAGTTTGGGGGTCTAGTTAGCACTTCAAATATAGTGAAAGGAGAGAAAGTAACAGTGCAATCCGACTCCGATCTTCTCTGGACTCTCTCATTAAAAGGCAATGAAACAAGGCACTCTAGCACGTAGTGCCAAATTTAGCAATGCTTCCTTGCATTCTCAGCGTTAGGTAATGAAATCTTCTTTCTCCACCTAAAATAATAATAACTTCGAAGATCTACCCCTTGATCTTTTGTGCTTTTCTAGAGTTTGATTTTCAAGAAATTCATTTTCCATGTAATTTCATTTTTATGTTGATTAGGAAGTTGTATTTGCAATGCATAAAACAGATCAGTGCCATTATTTGTATGTTATTTGTTTTCGGTAACATTCTATACTCTAATAAATTTAGAGTTAAAAAGACAGCCACTCACCTTGTTGAGCGTTTAGGTATATATATTCCTTATTATGAGGTCAAAGTTTCGAATCTTTTCACGAAACCTTATTTTATAAGTAATATTTTGATTACTATATTCTTTTTAGAAGTAAAACATTATACTTCATCTTCATCAGTCTCATTTATTTGGATAACTAGAGGTTTTCAAGGAGTTGAGTTGGCATATA TCAAATCTTCGTTCGGAGAGCCTTTCAATCGCGCTCATTATCGCCATGGGCGTCTTCTTCCACTCCTCAGATTTTCTCCTCCCTTCTTCTACTTCTTCTCCGGCCGGCCACCCACCTTCTTCGACCTACGCCCTTGTTCTGCTCAACCAAAGCCTCCCCAAATTCACTCCTCTGCTCTGGAAGCACGCAAAACTTCGTCTCTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCAAGACGCTACGGATATTCGAAATAGCTATAAGCCAGATGTTATTAGAGGAGATATGGATTCAATTCGGACAGAAGTACTAGATTTTTATGCTAAGCAAGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAATCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCTCTAGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCTACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTATTCATCTTCTGCCAAGGACTCATCACCATGAAATCCATGTTCACTCATCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCCTCTGGACGCACTACGACCACTGGTCTCCAATGGGATTTGACTGATACAGAGATGAAGTTTGGGGGTCTAGTTAGCACTTCAAATATAGTGAAAGGAGAGAAAGTAACAGTGCAATCCGACTCCGATCTTCTCTGGACTCTCTCATTAAAAGGCAATGAAACAAGGCACTCTAGCACGTAGTGCCAAATTTAGCAATGCTTCCTTGCATTCTCAGCGTTAGGTAATGAAATCTTCTTTCTCCACCTAAAATAATAATAACTTCGAAGATCTACCCCTTGATCTTTTGTGCTTTTCTAGAGTTTGATTTTCAAGAAATTCATTTTCCATGTAATTTCATTTTTATGTTGATTAGGAAGTTGTATTTGCAATGCATAAAACAGATCAGTGCCATTATTTGTATGTTATTTGTTTTCGGTAACATTCTATACTCTAATAAATTTAGAGTTAAAAAGACAGCCACTCACCTTGTTGAGCGTTTAGGTATATATATTCCTTATTATGAGGTCAAAGTTTCGAATCTTTTCACGAAACCTTATTTTATAAGTAATATTTTGATTACTATATTCTTTTTAGAAGTAAAACATTATACTTCATCTTCATCAGTCTCATTTATTTGGATAACTAGAGGTTTTCAAGGAGTTGAGTTGGCATATA ATGGGCGTCTTCTTCCACTCCTCAGATTTTCTCCTCCCTTCTTCTACTTCTTCTCCGGCCGGCCACCCACCTTCTTCGACCTACGCCCTTGTTCTGCTCAACCAAAGCCTCCCCAAATTCACTCCTCTGCTCTGGAAGCACGCAAAACTTCGTCTCTGTGCCGATGGAGGCGCCAATCGCGTATTTGATGAATTGCCTCTGCTGTTTCCTCATCAAGACGCTACGGATATTCGAAATAGCTATAAGCCAGATGTTATTAGAGGAGATATGGATTCAATTCGGACAGAAGTACTAGATTTTTATGCTAAGCAAGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAATCTATGCCAAATCAGGAGGAGTCTAATCTGTGCATACTTGTTGCTGGAGCTCTAGGTGGACGGTTTGATCATGAGATGGGAAACATCAATGTTCTATGCCGTTTCTCTACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTATTCATCTTCTGCCAAGGACTCATCACCATGAAATCCATGTTCACTCATCTGTTGAGGGCCCTCATTGTGGTCTCATTCCAATTGGGATGCCCTCTGGACGCACTACGACCACTGGTCTCCAATGGGATTTGACTGATACAGAGATGAAGTTTGGGGGTCTAGTTAGCACTTCAAATATAGTGAAAGGAGAGAAAGTAACAGTGCAATCCGACTCCGATCTTCTCTGGACTCTCTCATTAAAAGGCAATGAAACAAGGCACTCTAGCACGTAG MGVFFHSSDFLLPSSTSSPAGHPPSSTYALVLLNQSLPKFTPLLWKHAKLRLCADGGANRVFDELPLLFPHQDATDIRNSYKPDVIRGDMDSIRTEVLDFYAKQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESNLCILVAGALGGRFDHEMGNINVLCRFSTTRIILLSDDCLIHLLPRTHHHEIHVHSSVEGPHCGLIPIGMPSGRTTTTGLQWDLTDTEMKFGGLVSTSNIVKGEKVTVQSDSDLLWTLSLKGNETRHSST
BLAST of Carg12107 vs. NCBI nr
Match: XP_023515266.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 543.9 bits (1400), Expect = 3.1e-151 Identity = 262/267 (98.13%), Postives = 266/267 (99.63%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_022960072.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 540.0 bits (1390), Expect = 4.4e-150 Identity = 263/267 (98.50%), Postives = 266/267 (99.63%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_023004625.1 (thiamine pyrophosphokinase 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 535.4 bits (1378), Expect = 1.1e-148 Identity = 258/263 (98.10%), Postives = 262/263 (99.62%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_008451592.1 (PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 477.6 bits (1228), Expect = 2.7e-131 Identity = 232/258 (89.92%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of Carg12107 vs. NCBI nr
Match: XP_022953399.1 (thiamine pyrophosphokinase 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 471.9 bits (1213), Expect = 1.5e-129 Identity = 227/258 (87.98%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of Carg12107 vs. TAIR10
Match: AT1G02880.3 (thiamin pyrophosphokinase1) HSP 1 Score: 382.9 bits (982), Expect = 1.6e-106 Identity = 182/258 (70.54%), Postives = 212/258 (82.17%), Query Frame = 0
BLAST of Carg12107 vs. TAIR10
Match: AT2G44750.2 (thiamin pyrophosphokinase 2) HSP 1 Score: 377.1 bits (967), Expect = 9.0e-105 Identity = 178/258 (68.99%), Postives = 210/258 (81.40%), Query Frame = 0
BLAST of Carg12107 vs. Swiss-Prot
Match: sp|B9DGU7|TPK1_ARATH (Thiamine pyrophosphokinase 1 OS=Arabidopsis thaliana OX=3702 GN=TPK1 PE=2 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 3.0e-105 Identity = 182/258 (70.54%), Postives = 212/258 (82.17%), Query Frame = 0
BLAST of Carg12107 vs. Swiss-Prot
Match: sp|F4IV16|TPK2_ARATH (Thiamine pyrophosphokinase 2 OS=Arabidopsis thaliana OX=3702 GN=TPK2 PE=2 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 1.6e-103 Identity = 178/258 (68.99%), Postives = 210/258 (81.40%), Query Frame = 0
BLAST of Carg12107 vs. Swiss-Prot
Match: sp|Q5JK24|TPK1_ORYSJ (Thiamine pyrophosphokinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK1 PE=2 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 8.1e-95 Identity = 168/258 (65.12%), Postives = 202/258 (78.29%), Query Frame = 0
BLAST of Carg12107 vs. Swiss-Prot
Match: sp|Q0JMW0|TPK2_ORYSJ (Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK2 PE=2 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 4.2e-91 Identity = 160/258 (62.02%), Postives = 200/258 (77.52%), Query Frame = 0
BLAST of Carg12107 vs. Swiss-Prot
Match: sp|Q60DX1|TPK3_ORYSJ (Thiamine pyrophosphokinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPK3 PE=2 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 3.5e-90 Identity = 162/256 (63.28%), Postives = 192/256 (75.00%), Query Frame = 0
BLAST of Carg12107 vs. TrEMBL
Match: tr|A0A1S3BSZ4|A0A1S3BSZ4_CUCME (Thiamine pyrophosphokinase OS=Cucumis melo OX=3656 GN=LOC103492826 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 1.8e-131 Identity = 232/258 (89.92%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of Carg12107 vs. TrEMBL
Match: tr|A0A0A0KAV4|A0A0A0KAV4_CUCSA (Thiamine pyrophosphokinase OS=Cucumis sativus OX=3659 GN=Csa_7G396410 PE=3 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 2.1e-124 Identity = 225/264 (85.23%), Postives = 236/264 (89.39%), Query Frame = 0
BLAST of Carg12107 vs. TrEMBL
Match: tr|M5VLQ1|M5VLQ1_PRUPE (Thiamine pyrophosphokinase OS=Prunus persica OX=3760 GN=PRUPE_8G259100 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 7.5e-114 Identity = 197/258 (76.36%), Postives = 225/258 (87.21%), Query Frame = 0
BLAST of Carg12107 vs. TrEMBL
Match: tr|A0A2I4E6X9|A0A2I4E6X9_9ROSI (Thiamine pyrophosphokinase OS=Juglans regia OX=51240 GN=LOC108986844 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 7.5e-114 Identity = 197/258 (76.36%), Postives = 225/258 (87.21%), Query Frame = 0
BLAST of Carg12107 vs. TrEMBL
Match: tr|A0A061DQN6|A0A061DQN6_THECC (Thiamine pyrophosphokinase OS=Theobroma cacao OX=3641 GN=TCM_004627 PE=3 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 4.9e-113 Identity = 196/258 (75.97%), Postives = 225/258 (87.21%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |